BacMap

Definition	Ruegeria sp. TM1040, complete genome.
Accession	NC_008044
Length	3,200,938

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The map label for this gene is oppD [H]

Identifier: 99082582

GI number: 99082582

Start: 2887058

End: 2887870

Strand: Reverse

Name: oppD [H]

Synonym: TM1040_2742

Alternate gene names: 99082582

Gene position: 2887870-2887058 (Counterclockwise)

Preceding gene: 99082583

Following gene: 99082581

Centisome position: 90.22

GC content: 62.48

Gene sequence:

>813_bases
ATGAGCGCCCTTCTTTCCGTCGAGGGCCTGCGGGTCGATTATCTGACTGCAGGCGCGCCTTTTACCGCCGTTCGGGACAT
CTCTTTTGAGATCCAGCCCAATGAGATCCTTGGTCTTGCGGGCGAGTCCGGCTGTGGCAAGAGCACGGTGGCCTATGCGC
TGATGCGTTTGCACAAACCGCCGGCTTTGGTGCGCCGGGGGCGCATCCTCTTTGAGGGGCGCGATGTCCTGTCTTTCTCT
GACAAGGATTTGCGTGCCTGGCGCTGGTCGGAGGTCTCCATGGTGTTCCAGAGCGCGATGAACTCTCTGAGCCCGGTGAT
GACGATCTTTCGTCAGTTCTACGACATGCTGCGCGCGCATGGGACGATCACCAAGGCAGACGCCATGGCGCGTACCGCCG
ACATGCTGGAAATGGTCGGTATCCCCGCAGACCGCATGCACGCCCACCCGCATCAGCTGTCGGGCGGGATGCGGCAGCGG
GTGGCGCTTGCGCTGGCGCTCACCTTGCAGCCCAAGCTTATTATCATGGATGAGCCAACGACGGCGCTTGACGTGGTGGT
GCAGCGGGAGATCCTGCAAGAGGTGCTGCGCCTCAAGGACAAGCTTGGGTTCTCGGTTCTGTTCATCACCCACGACATCG
CCCTGATGGCGCAGATCTCGGATCGCATCGGCATCATGCGCGCGGGCGAGATCGTCGAGATCGGCACCGCCGCGCAGATC
GTGACCAACCCAAGCCACGACTACACCCGCAGCCTGTGGGAGGCGATGCCGATCCTCGCCAAACGCCCGGAAGGAGCGCG
CCATGCTGTCTGA

Upstream 100 bases:

>100_bases
ACGAGATCGCAAACCCCCGGATGCGCACCCTTGGCAATGTCGCCAAGGCGCTGCGGATCGAAAAGCGCTTGCTGCGCCAA
CGCATGCAGGAGGCCGAGCA

Downstream 100 bases:

>100_bases
GACGCCTATTCTGAGCCTCGAGAACCTCAGCAAGACCTTTACCCTGCGCCCCGCCTTTGGCCGCGCAACCCAAGTGAATG
CCCTGCGCAATGTCTCGCTT

Product: ABC transporter related

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KD [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSALLSVEGLRVDYLTAGAPFTAVRDISFEIQPNEILGLAGESGCGKSTVAYALMRLHKPPALVRRGRILFEGRDVLSFS
DKDLRAWRWSEVSMVFQSAMNSLSPVMTIFRQFYDMLRAHGTITKADAMARTADMLEMVGIPADRMHAHPHQLSGGMRQR
VALALALTLQPKLIIMDEPTTALDVVVQREILQEVLRLKDKLGFSVLFITHDIALMAQISDRIGIMRAGEIVEIGTAAQI
VTNPSHDYTRSLWEAMPILAKRPEGARHAV

Sequences:

>Translated_270_residues
MSALLSVEGLRVDYLTAGAPFTAVRDISFEIQPNEILGLAGESGCGKSTVAYALMRLHKPPALVRRGRILFEGRDVLSFS
DKDLRAWRWSEVSMVFQSAMNSLSPVMTIFRQFYDMLRAHGTITKADAMARTADMLEMVGIPADRMHAHPHQLSGGMRQR
VALALALTLQPKLIIMDEPTTALDVVVQREILQEVLRLKDKLGFSVLFITHDIALMAQISDRIGIMRAGEIVEIGTAAQI
VTNPSHDYTRSLWEAMPILAKRPEGARHAV
>Mature_269_residues
SALLSVEGLRVDYLTAGAPFTAVRDISFEIQPNEILGLAGESGCGKSTVAYALMRLHKPPALVRRGRILFEGRDVLSFSD
KDLRAWRWSEVSMVFQSAMNSLSPVMTIFRQFYDMLRAHGTITKADAMARTADMLEMVGIPADRMHAHPHQLSGGMRQRV
ALALALTLQPKLIIMDEPTTALDVVVQREILQEVLRLKDKLGFSVLFITHDIALMAQISDRIGIMRAGEIVEIGTAAQIV
TNPSHDYTRSLWEAMPILAKRPEGARHAV

Specific function: Part of the binding protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system. Required for sporulation and competence [H]

COG id: COG0444

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI6005701, Length=261, Percent_Identity=26.4367816091954, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI4505771, Length=266, Percent_Identity=28.9473684210526, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI9961252, Length=266, Percent_Identity=28.9473684210526, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI9961250, Length=269, Percent_Identity=28.996282527881, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI27477115, Length=232, Percent_Identity=26.2931034482759, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27436953, Length=231, Percent_Identity=25.974025974026, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI153792144, Length=231, Percent_Identity=25.5411255411255, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI42490749, Length=244, Percent_Identity=28.2786885245902, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI21536378, Length=226, Percent_Identity=26.9911504424779, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI21536376, Length=220, Percent_Identity=26.3636363636364, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI116734710, Length=215, Percent_Identity=26.5116279069767, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI21729873, Length=223, Percent_Identity=30.0448430493274, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI15149474, Length=223, Percent_Identity=30.0448430493274, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI42741659, Length=226, Percent_Identity=27.4336283185841, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI105990541, Length=234, Percent_Identity=29.0598290598291, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1789963, Length=264, Percent_Identity=42.0454545454545, Blast_Score=211, Evalue=3e-56,
Organism=Escherichia coli, GI145693107, Length=265, Percent_Identity=41.8867924528302, Blast_Score=207, Evalue=8e-55,
Organism=Escherichia coli, GI48994883, Length=263, Percent_Identity=41.8250950570342, Blast_Score=206, Evalue=9e-55,
Organism=Escherichia coli, GI1787759, Length=257, Percent_Identity=40.8560311284047, Blast_Score=198, Evalue=4e-52,
Organism=Escherichia coli, GI1788506, Length=258, Percent_Identity=40.6976744186046, Blast_Score=197, Evalue=6e-52,
Organism=Escherichia coli, GI1787500, Length=239, Percent_Identity=38.9121338912134, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1789032, Length=236, Percent_Identity=38.135593220339, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI1789962, Length=237, Percent_Identity=34.5991561181435, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1787758, Length=239, Percent_Identity=35.5648535564854, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI48994997, Length=249, Percent_Identity=34.9397590361446, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1787548, Length=261, Percent_Identity=32.183908045977, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1789891, Length=258, Percent_Identity=32.1705426356589, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787547, Length=230, Percent_Identity=33.0434782608696, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=36.5638766519824, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=31.981981981982, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=35.9090909090909, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1789672, Length=253, Percent_Identity=30.8300395256917, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1789890, Length=250, Percent_Identity=33.6, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=31.3304721030043, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788225, Length=234, Percent_Identity=31.6239316239316, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1790162, Length=234, Percent_Identity=28.6324786324786, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787029, Length=229, Percent_Identity=31.8777292576419, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1788761, Length=238, Percent_Identity=32.7731092436975, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1788450, Length=231, Percent_Identity=29.4372294372294, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787105, Length=232, Percent_Identity=30.6034482758621, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789873, Length=212, Percent_Identity=31.1320754716981, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=30.1310043668122, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787712, Length=223, Percent_Identity=30.9417040358744, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=32.8828828828829, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1790467, Length=225, Percent_Identity=28, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082267, Length=231, Percent_Identity=27.7056277056277, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786872, Length=237, Percent_Identity=32.0675105485232, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786345, Length=226, Percent_Identity=30.9734513274336, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1790190, Length=231, Percent_Identity=29.004329004329, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788644, Length=217, Percent_Identity=31.3364055299539, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI48995001, Length=229, Percent_Identity=29.6943231441048, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=25.7936507936508, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI48994943, Length=223, Percent_Identity=32.2869955156951, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786803, Length=242, Percent_Identity=27.6859504132231, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789586, Length=250, Percent_Identity=32, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786563, Length=218, Percent_Identity=29.3577981651376, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1790525, Length=235, Percent_Identity=27.2340425531915, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789991, Length=237, Percent_Identity=27.0042194092827, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=30.7692307692308, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786703, Length=209, Percent_Identity=29.6650717703349, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786698, Length=213, Percent_Identity=30.0469483568075, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1786319, Length=211, Percent_Identity=27.4881516587678, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI87081782, Length=227, Percent_Identity=26.8722466960352, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787143, Length=234, Percent_Identity=29.0598290598291, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788053, Length=194, Percent_Identity=31.4432989690722, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788472, Length=209, Percent_Identity=25.8373205741627, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788002, Length=234, Percent_Identity=25.2136752136752, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788210, Length=229, Percent_Identity=31.0043668122271, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788540, Length=218, Percent_Identity=28.8990825688073, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1789593, Length=220, Percent_Identity=25.9090909090909, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786981, Length=226, Percent_Identity=28.7610619469027, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=259, Percent_Identity=30.1158301158301, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI193209708, Length=230, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17541710, Length=229, Percent_Identity=28.3842794759825, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI193208177, Length=248, Percent_Identity=29.4354838709677, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17569143, Length=245, Percent_Identity=30.2040816326531, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17569145, Length=224, Percent_Identity=31.25, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71992290, Length=228, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17567265, Length=222, Percent_Identity=29.7297297297297, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71984940, Length=219, Percent_Identity=27.3972602739726, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=221, Percent_Identity=27.6018099547511, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=226, Percent_Identity=29.2035398230088, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=222, Percent_Identity=27.4774774774775, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=222, Percent_Identity=27.4774774774775, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71983516, Length=236, Percent_Identity=23.3050847457627, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71983510, Length=236, Percent_Identity=23.3050847457627, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71983523, Length=236, Percent_Identity=23.3050847457627, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115535101, Length=228, Percent_Identity=28.5087719298246, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=26.7543859649123, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17511077, Length=216, Percent_Identity=26.8518518518519, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=240, Percent_Identity=28.75, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533608, Length=220, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323217, Length=239, Percent_Identity=30.5439330543933, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322640, Length=251, Percent_Identity=28.6852589641434, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322980, Length=229, Percent_Identity=26.2008733624454, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI281363262, Length=263, Percent_Identity=25.8555133079848, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24653245, Length=263, Percent_Identity=25.8555133079848, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24648314, Length=250, Percent_Identity=27.2, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24659289, Length=227, Percent_Identity=29.5154185022026, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17136662, Length=216, Percent_Identity=27.3148148148148, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI85726357, Length=253, Percent_Identity=25.6916996047431, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI45552363, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552345, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552353, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552343, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552335, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24583969, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552351, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552347, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552357, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552359, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45550972, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552339, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552337, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552355, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552349, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552341, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552361, Length=224, Percent_Identity=28.125, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221500365, Length=216, Percent_Identity=27.3148148148148, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI116007184, Length=216, Percent_Identity=27.3148148148148, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574150, Length=219, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007328, Length=219, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45552437, Length=245, Percent_Identity=26.9387755102041, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585557, Length=245, Percent_Identity=26.9387755102041, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221512771, Length=218, Percent_Identity=26.1467889908257, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24666092, Length=213, Percent_Identity=25.8215962441315, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585091, Length=230, Percent_Identity=27.8260869565217, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643674, Length=216, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24582014, Length=250, Percent_Identity=25.2, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24582012, Length=250, Percent_Identity=25.2, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 29933; Mature: 29802

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALLSVEGLRVDYLTAGAPFTAVRDISFEIQPNEILGLAGESGCGKSTVAYALMRLHKP
CCCCEEECCCEEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCC
PALVRRGRILFEGRDVLSFSDKDLRAWRWSEVSMVFQSAMNSLSPVMTIFRQFYDMLRAH
HHHHHCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTITKADAMARTADMLEMVGIPADRMHAHPHQLSGGMRQRVALALALTLQPKLIIMDEPT
CCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCHHHHHHHHHHHEECCCEEEEEECCC
TALDVVVQREILQEVLRLKDKLGFSVLFITHDIALMAQISDRIGIMRAGEIVEIGTAAQI
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCEEECCCEEEECCCEEE
VTNPSHDYTRSLWEAMPILAKRPEGARHAV
EECCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SALLSVEGLRVDYLTAGAPFTAVRDISFEIQPNEILGLAGESGCGKSTVAYALMRLHKP
CCCEEECCCEEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCC
PALVRRGRILFEGRDVLSFSDKDLRAWRWSEVSMVFQSAMNSLSPVMTIFRQFYDMLRAH
HHHHHCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTITKADAMARTADMLEMVGIPADRMHAHPHQLSGGMRQRVALALALTLQPKLIIMDEPT
CCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCHHHHHHHHHHHEECCCEEEEEECCC
TALDVVVQREILQEVLRLKDKLGFSVLFITHDIALMAQISDRIGIMRAGEIVEIGTAAQI
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCEEECCCEEEECCCEEE
VTNPSHDYTRSLWEAMPILAKRPEGARHAV
EECCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]