Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yflP [H]

Identifier: 99082572

GI number: 99082572

Start: 2875403

End: 2876383

Strand: Reverse

Name: yflP [H]

Synonym: TM1040_2732

Alternate gene names: 99082572

Gene position: 2876383-2875403 (Counterclockwise)

Preceding gene: 99082576

Following gene: 99082571

Centisome position: 89.86

GC content: 61.77

Gene sequence:

>981_bases
ATGACATCTTTTGCACTGGGTCGTCGCACCCTGATGGCTGCTGCTGCTGCGGCTCTGACTTTCGGCTCTCCGGTGATGGC
CGAGCAGGCGCTCGATAAGCTGCACTTTCTGATCCCCGGTGGCGCCGGTGGTGGCTGGGACGGTACCGCCCGTGGCACGG
GTGAGGCGCTGACCAAATCCGGTCTTGTGGGCACCGCATCCTATGAAAACATGTCCGGCGGTGGCGGTGGCAAGGCCATC
GGGTATCTCATCGAGAACGCCGAGAGCCTTGAAGACACGCTGATGGTGAACTCCACCCCGATCGTGATCCGCTCCCTGAC
CGGCGTGTTCCCGCACAACTTCCGTGACCTGACGCTGGTTGCGGGCACCATTGGCGACTACGCGGCACTGGTCGTGGCCA
AGGACAGCCCGATCAACAACATGGAAGAGTTCCTTGCGGCCTACCGTGAAGATCCGCGCGGCACTGCTGTCGGCGGTGGC
TCGGTTCCCGGCGGCATGGATCACCTTGTTGCAGCGATGGTGATGCAGTCTGCGGGCGAAGATCCGACCGCGCTGAAATA
CATCCCCTATGATGCGGGCGGCAAGGCGATGGCTGCGCTCCTGTCTGGCGAAATCAAGGCGCTCTCCACCGGGTTCTCCG
AGGCGATCGCATTGGCCGAAGCCGGCGAAGTGAAAATCCTCGGCGTGACCGCGGATGAGCGCGTCCCGGCCTACGATGCA
GCCGCTACTATGAAAGAGCAGGGTCTGGACACGACCTTTGTGAACTGGCGTGGGTTCTTTGGCGCGCCGGGCCTGTCTGA
AGACAAGGTTGCCGCCTATCAGGACGTGCTGGCCAAGATGTATGACACCCCCGAGTGGGAAGACGTGCGCGCGCGCAACG
GCTGGGTCAACATCCACAACTCCGGCGATGAGTTCAAAGCCTTCCTTGAAGGTCAGGAAAAGGTCATCGGCGACCTGATG
AAGCAACTGGGCTTCCTCTAA

Upstream 100 bases:

>100_bases
CGGCGAAACATCTGCTCCGTGTCAGGTTTGTGTCAGCTTGGGCCGGAATACCATGATTCATGATCGCGCTTTTGCGCGTT
TGTCAAATGGGAGGAACATT

Downstream 100 bases:

>100_bases
TCTTCGAGCAGTGACCTTAGGTCCGGCGCCACTCCCGGCGCCGGACCCTTTCCCGTACCCCCTCACATCAAAAACAGGAG
GAGATCATGGCGCTCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTSFALGRRTLMAAAAAALTFGSPVMAEQALDKLHFLIPGGAGGGWDGTARGTGEALTKSGLVGTASYENMSGGGGGKAI
GYLIENAESLEDTLMVNSTPIVIRSLTGVFPHNFRDLTLVAGTIGDYAALVVAKDSPINNMEEFLAAYREDPRGTAVGGG
SVPGGMDHLVAAMVMQSAGEDPTALKYIPYDAGGKAMAALLSGEIKALSTGFSEAIALAEAGEVKILGVTADERVPAYDA
AATMKEQGLDTTFVNWRGFFGAPGLSEDKVAAYQDVLAKMYDTPEWEDVRARNGWVNIHNSGDEFKAFLEGQEKVIGDLM
KQLGFL

Sequences:

>Translated_326_residues
MTSFALGRRTLMAAAAAALTFGSPVMAEQALDKLHFLIPGGAGGGWDGTARGTGEALTKSGLVGTASYENMSGGGGGKAI
GYLIENAESLEDTLMVNSTPIVIRSLTGVFPHNFRDLTLVAGTIGDYAALVVAKDSPINNMEEFLAAYREDPRGTAVGGG
SVPGGMDHLVAAMVMQSAGEDPTALKYIPYDAGGKAMAALLSGEIKALSTGFSEAIALAEAGEVKILGVTADERVPAYDA
AATMKEQGLDTTFVNWRGFFGAPGLSEDKVAAYQDVLAKMYDTPEWEDVRARNGWVNIHNSGDEFKAFLEGQEKVIGDLM
KQLGFL
>Mature_325_residues
TSFALGRRTLMAAAAAALTFGSPVMAEQALDKLHFLIPGGAGGGWDGTARGTGEALTKSGLVGTASYENMSGGGGGKAIG
YLIENAESLEDTLMVNSTPIVIRSLTGVFPHNFRDLTLVAGTIGDYAALVVAKDSPINNMEEFLAAYREDPRGTAVGGGS
VPGGMDHLVAAMVMQSAGEDPTALKYIPYDAGGKAMAALLSGEIKALSTGFSEAIALAEAGEVKILGVTADERVPAYDAA
ATMKEQGLDTTFVNWRGFFGAPGLSEDKVAAYQDVLAKMYDTPEWEDVRARNGWVNIHNSGDEFKAFLEGQEKVIGDLMK
QLGFL

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34100; Mature: 33969

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFALGRRTLMAAAAAALTFGSPVMAEQALDKLHFLIPGGAGGGWDGTARGTGEALTKS
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHC
GLVGTASYENMSGGGGGKAIGYLIENAESLEDTLMVNSTPIVIRSLTGVFPHNFRDLTLV
CCEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHEEECCCCHHHHHHHCCCCCCCCEEEEE
AGTIGDYAALVVAKDSPINNMEEFLAAYREDPRGTAVGGGSVPGGMDHLVAAMVMQSAGE
EECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
DPTALKYIPYDAGGKAMAALLSGEIKALSTGFSEAIALAEAGEVKILGVTADERVPAYDA
CCCEEEEEECCCCHHHHHHHHHCCHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCHHH
AATMKEQGLDTTFVNWRGFFGAPGLSEDKVAAYQDVLAKMYDTPEWEDVRARNGWVNIHN
HHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECC
SGDEFKAFLEGQEKVIGDLMKQLGFL
CCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSFALGRRTLMAAAAAALTFGSPVMAEQALDKLHFLIPGGAGGGWDGTARGTGEALTKS
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHC
GLVGTASYENMSGGGGGKAIGYLIENAESLEDTLMVNSTPIVIRSLTGVFPHNFRDLTLV
CCEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHEEECCCCHHHHHHHCCCCCCCCEEEEE
AGTIGDYAALVVAKDSPINNMEEFLAAYREDPRGTAVGGGSVPGGMDHLVAAMVMQSAGE
EECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
DPTALKYIPYDAGGKAMAALLSGEIKALSTGFSEAIALAEAGEVKILGVTADERVPAYDA
CCCEEEEEECCCCHHHHHHHHHCCHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCHHH
AATMKEQGLDTTFVNWRGFFGAPGLSEDKVAAYQDVLAKMYDTPEWEDVRARNGWVNIHN
HHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECC
SGDEFKAFLEGQEKVIGDLMKQLGFL
CCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]