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The map label for this gene is yaeJ [C]

Identifier: 99082506

GI number: 99082506

Start: 2801738

End: 2802157

Strand: Direct

Name: yaeJ [C]

Synonym: TM1040_2666

Alternate gene names: 99082506

Gene position: 2801738-2802157 (Clockwise)

Preceding gene: 99082505

Following gene: 99082507

Centisome position: 87.53

GC content: 64.29

Gene sequence:

>420_bases
ATGCTACGCATAAACGACGATATCACCCTGCAAGACTGGGAACTGACCGAGAGCTTCATGCGCGCCTCTGGCCCCGGTGG
GCAGAACGTCAACAAGGTTTCATCGGCCGTTGAGCTGCGCTTTGAGGCCGAACGCTCTCCGCATCTGCCCGGCCCGGTCA
AAACCCGCCTGCGCCGCATTGCCGGGCGGCGCTGGACCAATGACGGCGCGCTGATCCTGCAATGTGACGAGACCCGCTCG
CAGGCGCGCAATCGCGAGATCATCCGCGAGCGTCTCGCAGAGCTCATTCGCCGTGCCCTGATAAAACCCAAGCGCCGTAT
CGCCACCAAACCCACCCGTGGCAGCGTCGAACGCCGCCTCAAGGCCAAGAAAACCCGCGCCGAGGTGAAATCCCTGCGCG
GGCGGGTGGACGGCGACTGA

Upstream 100 bases:

>100_bases
CCAGGTTCCCACTTTTGCGCGACATGCTCTTGGTAATGCCGCATGTCTGAGGTCGCAAAACCGGTTCCCACTTTTGCGCG
ACATGCTCTATGGTCCGCCC

Downstream 100 bases:

>100_bases
ATTTCACAATTGCGTCCGCATGTGAGGCGGGCCACCCTGCACAAAGTTGCGCCAGAACGCCAAACGGCGCGGCAGCGCTA
AGACTGTGCGCCCGGAACGG

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLRINDDITLQDWELTESFMRASGPGGQNVNKVSSAVELRFEAERSPHLPGPVKTRLRRIAGRRWTNDGALILQCDETRS
QARNREIIRERLAELIRRALIKPKRRIATKPTRGSVERRLKAKKTRAEVKSLRGRVDGD

Sequences:

>Translated_139_residues
MLRINDDITLQDWELTESFMRASGPGGQNVNKVSSAVELRFEAERSPHLPGPVKTRLRRIAGRRWTNDGALILQCDETRS
QARNREIIRERLAELIRRALIKPKRRIATKPTRGSVERRLKAKKTRAEVKSLRGRVDGD
>Mature_139_residues
MLRINDDITLQDWELTESFMRASGPGGQNVNKVSSAVELRFEAERSPHLPGPVKTRLRRIAGRRWTNDGALILQCDETRS
QARNREIIRERLAELIRRALIKPKRRIATKPTRGSVERRLKAKKTRAEVKSLRGRVDGD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Homo sapiens, GI4557657, Length=146, Percent_Identity=33.5616438356164, Blast_Score=63, Evalue=8e-11,
Organism=Escherichia coli, GI1786389, Length=136, Percent_Identity=39.7058823529412, Blast_Score=96, Evalue=6e-22,
Organism=Drosophila melanogaster, GI19921098, Length=128, Percent_Identity=31.25, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15966; Mature: 15966

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRINDDITLQDWELTESFMRASGPGGQNVNKVSSAVELRFEAERSPHLPGPVKTRLRRI
CEECCCCCEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AGRRWTNDGALILQCDETRSQARNREIIRERLAELIRRALIKPKRRIATKPTRGSVERRL
HCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHH
KAKKTRAEVKSLRGRVDGD
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLRINDDITLQDWELTESFMRASGPGGQNVNKVSSAVELRFEAERSPHLPGPVKTRLRRI
CEECCCCCEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AGRRWTNDGALILQCDETRSQARNREIIRERLAELIRRALIKPKRRIATKPTRGSVERRL
HCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHH
KAKKTRAEVKSLRGRVDGD
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]