| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082462
Identifier: 99082462
GI number: 99082462
Start: 2754850
End: 2756106
Strand: Direct
Name: 99082462
Synonym: TM1040_2622
Alternate gene names: NA
Gene position: 2754850-2756106 (Clockwise)
Preceding gene: 99082461
Following gene: 99082463
Centisome position: 86.06
GC content: 62.53
Gene sequence:
>1257_bases ATGCCTTTGAAAAAGTCCTGGGTGACGTCGGCCAATTCCGCTGACCACCCTTTTCCGCTGAACAACCTTCCCTATGGCGT GTTTTCAACCCCCGACAGTGATCCGCGCTGTGGGGTCGCCATCGGCGATATGATCCTCGATCTTGCTGCGGCAGAGGCGG CGGGGCTGATCGACCTCGCAGATGAGCCAATGTTCGAAATGCCCTTCTGGAACGAGTTTATGGAAGAAGGCCCCGCGGTC TGGGCCGCGTTGCGCACCCGCCTGATCGCGCTTCTGGAAGAGGGCTCGGACGCGCAAAACAAGGTCGAGCCTTGTCTCGT ACCGATGTCAGGCGCTGAGATGCATATGCCAATCATGGTGTCGGAATACACCGATTTCTATGCCGGGCGTCATCACGCCA CCAATGTCGGCACCATGTTTCGGGGCGCCGAGAACGCGCTGCCGCCAAACTGGCTGCATATTCCGATCGGATACAATGGT CGTGCCTCCTCGGTTGTGGTCTCCGGCACCGATGTGCGCCGTCCCTGGGGTCAGCTCAAGGGGCCAAATGACGACGCACC CCGTTGGGCCCCCTGTGCGCGCTTTGACATCGAACTGGAGATGGGAGCCATCGTCGGGACACCCTCCGACGGGCCGATCA CGGTGCAGGACGCGGACGATCACATCTTTGGCTATGTGCTGCTGAACGACTGGTCCGCCCGCGATATTCAGGCTTGGGAA TACCAGCCGCTCGGCCCTTTTCAGGCCAAGGCGACCGCCACCACCATCAGCCCCTGGATCGTCACCAAGGCCGCATTGGA GCCCTTCCGCTGCGACACCCCCGCGCGGGAGGTCGAGCTTCTCGATCACCTCAAGGACTGTGGCCCGATGCTCTATGACA TCGACCTTGCCGTGACCCTGCGCCCCGAGGGGGGCGAAGAGGCCACCATCGCACGCACCAACTACAAGGAAATGTACTAT TCCGCCGCGCAGCAACTGGCCCATCACACCACATCGGGCTGCCCGATGAACGCGGGCGACCTGCTGGGTTCCGGCACCAT CTCCGGTCCGAACAAGGACGAACGCGGCTCGCTCCTCGAACTCAGCTGGGGTGGCAAGGAGCCTCTCACCCTGCCTTCGG GCGATACCCGCAGCTTTATCGAGGATGGCGACACGCTGACCCTCAAAGGCGCGGCCAAGGGCGAGGGCTACACCATCGGC TTTGGCGACTGCACCGGCACGGTGCTGCCCGCCCTCAGCGATCCGTTTGCACGCTGA
Upstream 100 bases:
>100_bases CCCCCTCTGCGGCCCCAATTGGGGCCGCATTCACCCCCGAGATATTTGTAAAAAGCTGAAGGAGGGCCAGCAGAGCCCTC ACCACCAAAAAGGAACGCGC
Downstream 100 bases:
>100_bases CGGTTCCATCTTTCCTCAAATACCTCCGCCGGAGGCACCCCAACCTGACCTCCGGCGGACCAGACAAAAAGGATACGCAA CCATGGCCAAGGCCTTCGCA
Product: fumarylacetoacetate hydrolase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MPLKKSWVTSANSADHPFPLNNLPYGVFSTPDSDPRCGVAIGDMILDLAAAEAAGLIDLADEPMFEMPFWNEFMEEGPAV WAALRTRLIALLEEGSDAQNKVEPCLVPMSGAEMHMPIMVSEYTDFYAGRHHATNVGTMFRGAENALPPNWLHIPIGYNG RASSVVVSGTDVRRPWGQLKGPNDDAPRWAPCARFDIELEMGAIVGTPSDGPITVQDADDHIFGYVLLNDWSARDIQAWE YQPLGPFQAKATATTISPWIVTKAALEPFRCDTPAREVELLDHLKDCGPMLYDIDLAVTLRPEGGEEATIARTNYKEMYY SAAQQLAHHTTSGCPMNAGDLLGSGTISGPNKDERGSLLELSWGGKEPLTLPSGDTRSFIEDGDTLTLKGAAKGEGYTIG FGDCTGTVLPALSDPFAR
Sequences:
>Translated_418_residues MPLKKSWVTSANSADHPFPLNNLPYGVFSTPDSDPRCGVAIGDMILDLAAAEAAGLIDLADEPMFEMPFWNEFMEEGPAV WAALRTRLIALLEEGSDAQNKVEPCLVPMSGAEMHMPIMVSEYTDFYAGRHHATNVGTMFRGAENALPPNWLHIPIGYNG RASSVVVSGTDVRRPWGQLKGPNDDAPRWAPCARFDIELEMGAIVGTPSDGPITVQDADDHIFGYVLLNDWSARDIQAWE YQPLGPFQAKATATTISPWIVTKAALEPFRCDTPAREVELLDHLKDCGPMLYDIDLAVTLRPEGGEEATIARTNYKEMYY SAAQQLAHHTTSGCPMNAGDLLGSGTISGPNKDERGSLLELSWGGKEPLTLPSGDTRSFIEDGDTLTLKGAAKGEGYTIG FGDCTGTVLPALSDPFAR >Mature_417_residues PLKKSWVTSANSADHPFPLNNLPYGVFSTPDSDPRCGVAIGDMILDLAAAEAAGLIDLADEPMFEMPFWNEFMEEGPAVW AALRTRLIALLEEGSDAQNKVEPCLVPMSGAEMHMPIMVSEYTDFYAGRHHATNVGTMFRGAENALPPNWLHIPIGYNGR ASSVVVSGTDVRRPWGQLKGPNDDAPRWAPCARFDIELEMGAIVGTPSDGPITVQDADDHIFGYVLLNDWSARDIQAWEY QPLGPFQAKATATTISPWIVTKAALEPFRCDTPAREVELLDHLKDCGPMLYDIDLAVTLRPEGGEEATIARTNYKEMYYS AAQQLAHHTTSGCPMNAGDLLGSGTISGPNKDERGSLLELSWGGKEPLTLPSGDTRSFIEDGDTLTLKGAAKGEGYTIGF GDCTGTVLPALSDPFAR
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=417, Percent_Identity=48.6810551558753, Blast_Score=386, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17568863, Length=420, Percent_Identity=48.5714285714286, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI24657182, Length=416, Percent_Identity=46.1538461538462, Blast_Score=374, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 45275; Mature: 45144
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKKSWVTSANSADHPFPLNNLPYGVFSTPDSDPRCGVAIGDMILDLAAAEAAGLIDLA CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEHHHHHHHHHHHHHCCEEECC DEPMFEMPFWNEFMEEGPAVWAALRTRLIALLEEGSDAQNKVEPCLVPMSGAEMHMPIMV CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEECCEEE SEYTDFYAGRHHATNVGTMFRGAENALPPNWLHIPIGYNGRASSVVVSGTDVRRPWGQLK ECHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHCC GPNDDAPRWAPCARFDIELEMGAIVGTPSDGPITVQDADDHIFGYVLLNDWSARDIQAWE CCCCCCCCCCCCEEEEEEEEECEEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCCEE YQPLGPFQAKATATTISPWIVTKAALEPFRCDTPAREVELLDHLKDCGPMLYDIDLAVTL CCCCCCCCCCCEEEECCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEE RPEGGEEATIARTNYKEMYYSAAQQLAHHTTSGCPMNAGDLLGSGTISGPNKDERGSLLE CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEE LSWGGKEPLTLPSGDTRSFIEDGDTLTLKGAAKGEGYTIGFGDCTGTVLPALSDPFAR EECCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCEEEEECCCCCCHHHCCCCCCCC >Mature Secondary Structure PLKKSWVTSANSADHPFPLNNLPYGVFSTPDSDPRCGVAIGDMILDLAAAEAAGLIDLA CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEHHHHHHHHHHHHHCCEEECC DEPMFEMPFWNEFMEEGPAVWAALRTRLIALLEEGSDAQNKVEPCLVPMSGAEMHMPIMV CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEECCEEE SEYTDFYAGRHHATNVGTMFRGAENALPPNWLHIPIGYNGRASSVVVSGTDVRRPWGQLK ECHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHCC GPNDDAPRWAPCARFDIELEMGAIVGTPSDGPITVQDADDHIFGYVLLNDWSARDIQAWE CCCCCCCCCCCCEEEEEEEEECEEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCCEE YQPLGPFQAKATATTISPWIVTKAALEPFRCDTPAREVELLDHLKDCGPMLYDIDLAVTL CCCCCCCCCCCEEEECCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEE RPEGGEEATIARTNYKEMYYSAAQQLAHHTTSGCPMNAGDLLGSGTISGPNKDERGSLLE CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEE LSWGGKEPLTLPSGDTRSFIEDGDTLTLKGAAKGEGYTIGFGDCTGTVLPALSDPFAR EECCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCEEEEECCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA