Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082463

Identifier: 99082463

GI number: 99082463

Start: 2756189

End: 2757139

Strand: Direct

Name: 99082463

Synonym: TM1040_2623

Alternate gene names: NA

Gene position: 2756189-2757139 (Clockwise)

Preceding gene: 99082462

Following gene: 99082464

Centisome position: 86.11

GC content: 62.46

Gene sequence:

>951_bases
ATGGCCAAGGCCTTCGCATCCCAAGGCGACATGAGCGAAAAGAAAATCTCCTTCACCGAGGTGGGCGAGGGACTTTATGC
CTTCACCGCCGAGGGCGACCCGAATTCAGGTGTGATCATCGGCGATGACTCGGTGATGATCGTCGAGGCGCAGGCAACCC
CGCGTCTGGCCAACAAGGTGATCGAATGTGTGCGCTCCGTGACCGACAAACCGATCAGCCATGTGGTGCTCACCCACTAC
CACGCGGTGCGTGTGCTCGGGGCCTCGGCCTTTGGGGCCCAGAACATCATCATGTCCGACACGGCACGCGCCATGGTCGT
CGAGCGCGGCCAGGAAGACTGGGACAGCGAATTCCAGCGATTCCCGCGCCTGTTCGAGGGTCATGAAAGCATCCCCGGCC
TCACATGGCCGACGACCACGTTTTCGGACAGCATGACCGTCTACCTCGGCAACCGCCGTGTCGACATCAAGCATCTGGGC
CGCGCCCATACCGCTGGCGACGCCGTGATCCATGTGCCGGATCAGAACGTCATGTTCACCGGCGACATCGTTGAATATCA
CTCCGCCTGCTACTGCGGCGACGGGCATTTTGGCGACTGGGGCAAGACGCTCGACAACATCAAAGCCTATGACGTGGACG
CCATCGCCCCCGGTCGTGGTGACGCGCTGGTCGGCAAGGACATGGTCAACGCCGCCATTGAAAACACCCGCGACTTTGTG
GAAAGCACCTATCGCCCCGCAGCCAAGGTTGCCGCGCGTGGCGGATCGCTCAAGGAAGCATGGGACGCGGTGCGCGACGC
CTGTGACCCCAAGTTCAAGGACTACGCGATCTACGAACACTGCCTGCCGTTCAACGTCGCCCGCGCCTATGACGAGGCCC
GTGGCATCGACACCCCCCGCATCTGGACCGCCCAGCGCGATCTGGAGATGTGGGAGGCGCTGCAGTCCTGA

Upstream 100 bases:

>100_bases
GATCCGTTTGCACGCTGACGGTTCCATCTTTCCTCAAATACCTCCGCCGGAGGCACCCCAACCTGACCTCCGGCGGACCA
GACAAAAAGGATACGCAACC

Downstream 100 bases:

>100_bases
TATCAGTCTCTAACCCATGGGTTAGAGACACATCACAGCCATTGGCGGCCTTGACCGCCCCTGCACCGGTCCCCCACCGA
GGGACCGGCCCAGTACCCGC

Product: beta-lactamase-like

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta Lactamase; Cyclase; Beta-Lactamase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Class B; Polyketide Cyclase; Secreted Hydrolase; Metallo-Beta-Lactamase; Zn-Dependent Hydrolase; Dehydrase; Metallo-Beta-Lactamase Superfamily; Beta Lactamase SoxH-Like Protein; Zn-Dependent Hydrolase Glyoxylase; Glyoxylase-Like Zinc-Dependent Hydrolase; Na-Translocating NADH-Quinone Reductase Subunit A; Metallo-Beta-Lactamase Domain-Containing Protein; Cyclase/Dehydrase; Bifunctional HHDD Isomerase/Cyclase/Dehydrase; Beta-Lactamase Domain Containing Protein; Rhodanese Domain Protein

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MAKAFASQGDMSEKKISFTEVGEGLYAFTAEGDPNSGVIIGDDSVMIVEAQATPRLANKVIECVRSVTDKPISHVVLTHY
HAVRVLGASAFGAQNIIMSDTARAMVVERGQEDWDSEFQRFPRLFEGHESIPGLTWPTTTFSDSMTVYLGNRRVDIKHLG
RAHTAGDAVIHVPDQNVMFTGDIVEYHSACYCGDGHFGDWGKTLDNIKAYDVDAIAPGRGDALVGKDMVNAAIENTRDFV
ESTYRPAAKVAARGGSLKEAWDAVRDACDPKFKDYAIYEHCLPFNVARAYDEARGIDTPRIWTAQRDLEMWEALQS

Sequences:

>Translated_316_residues
MAKAFASQGDMSEKKISFTEVGEGLYAFTAEGDPNSGVIIGDDSVMIVEAQATPRLANKVIECVRSVTDKPISHVVLTHY
HAVRVLGASAFGAQNIIMSDTARAMVVERGQEDWDSEFQRFPRLFEGHESIPGLTWPTTTFSDSMTVYLGNRRVDIKHLG
RAHTAGDAVIHVPDQNVMFTGDIVEYHSACYCGDGHFGDWGKTLDNIKAYDVDAIAPGRGDALVGKDMVNAAIENTRDFV
ESTYRPAAKVAARGGSLKEAWDAVRDACDPKFKDYAIYEHCLPFNVARAYDEARGIDTPRIWTAQRDLEMWEALQS
>Mature_315_residues
AKAFASQGDMSEKKISFTEVGEGLYAFTAEGDPNSGVIIGDDSVMIVEAQATPRLANKVIECVRSVTDKPISHVVLTHYH
AVRVLGASAFGAQNIIMSDTARAMVVERGQEDWDSEFQRFPRLFEGHESIPGLTWPTTTFSDSMTVYLGNRRVDIKHLGR
AHTAGDAVIHVPDQNVMFTGDIVEYHSACYCGDGHFGDWGKTLDNIKAYDVDAIAPGRGDALVGKDMVNAAIENTRDFVE
STYRPAAKVAARGGSLKEAWDAVRDACDPKFKDYAIYEHCLPFNVARAYDEARGIDTPRIWTAQRDLEMWEALQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34830; Mature: 34699

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAFASQGDMSEKKISFTEVGEGLYAFTAEGDPNSGVIIGDDSVMIVEAQATPRLANKV
CCCCCCCCCCCCHHEEEHHHHCCCEEEEEECCCCCCCEEECCCCEEEEECCCCHHHHHHH
IECVRSVTDKPISHVVLTHYHAVRVLGASAFGAQNIIMSDTARAMVVERGQEDWDSEFQR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCHHHHHHHH
FPRLFEGHESIPGLTWPTTTFSDSMTVYLGNRRVDIKHLGRAHTAGDAVIHVPDQNVMFT
HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEEHHHCCCCCCCCCEEEEECCCCEEEE
GDIVEYHSACYCGDGHFGDWGKTLDNIKAYDVDAIAPGRGDALVGKDMVNAAIENTRDFV
CHHHHHCCEEEECCCCCCCHHHHHHCCEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHH
ESTYRPAAKVAARGGSLKEAWDAVRDACDPKFKDYAIYEHCLPFNVARAYDEARGIDTPR
HHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCC
IWTAQRDLEMWEALQS
EEECHHHHHHHHHHCC
>Mature Secondary Structure 
AKAFASQGDMSEKKISFTEVGEGLYAFTAEGDPNSGVIIGDDSVMIVEAQATPRLANKV
CCCCCCCCCCCHHEEEHHHHCCCEEEEEECCCCCCCEEECCCCEEEEECCCCHHHHHHH
IECVRSVTDKPISHVVLTHYHAVRVLGASAFGAQNIIMSDTARAMVVERGQEDWDSEFQR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCHHHHHHHH
FPRLFEGHESIPGLTWPTTTFSDSMTVYLGNRRVDIKHLGRAHTAGDAVIHVPDQNVMFT
HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEEHHHCCCCCCCCCEEEEECCCCEEEE
GDIVEYHSACYCGDGHFGDWGKTLDNIKAYDVDAIAPGRGDALVGKDMVNAAIENTRDFV
CHHHHHCCEEEECCCCCCCHHHHHHCCEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHH
ESTYRPAAKVAARGGSLKEAWDAVRDACDPKFKDYAIYEHCLPFNVARAYDEARGIDTPR
HHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCC
IWTAQRDLEMWEALQS
EEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA