Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082437

Identifier: 99082437

GI number: 99082437

Start: 2735291

End: 2735620

Strand: Direct

Name: 99082437

Synonym: TM1040_2597

Alternate gene names: NA

Gene position: 2735291-2735620 (Clockwise)

Preceding gene: 99082429

Following gene: 99082440

Centisome position: 85.45

GC content: 59.39

Gene sequence:

>330_bases
ATGAACGACACTCTTGATACAGTCTTTGCGGCCCTGGCAGATCCGACCCGGCGGGCGATCCTGTCGATGCTGCTCGAAGA
CGATATGGCCGTCACCGATGTGGCCGAGCCTTTCGAGATGTCCTTGGCGGCGATTTCAAAGCATCTCACCATCCTCACCC
GCGCGGGCCTCATTCAGCAGGAAAAACGCGGACGGGTGAAGTGGTGCAAGCTACAACCGGACGCCTTGCGGGCAGCCTCG
GTCTGGATGCAGGGTTTTGGTCAGTTCGAGCCGGTGAACCTCGATGCATTCGAGCGCTTTCTCGAGGAAGAACTTCGCGA
CGGCGAGTGA

Upstream 100 bases:

>100_bases
TCTGCGCGCTCCTTAAATACGTCCGCAAACAATAGAGCGCCTTTGTGCGCACACGCTTCGGGATTGTCGACCCGCCTCTT
GCGCTTTAGGAGGTATCGGT

Downstream 100 bases:

>100_bases
GGGCCCGCAAACACCCTTCAGCCGAGCGAAGTCACACGTCGCCTATCCGTGCTCATCCTTCAACAGCAGCCAGAGCGCCA
CGATGGTGAGGCCAATGCCA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; ArsR Family Regulatory; Transcriptional Regulator ArsR Family Protein; Transcription Regulator ArsR; Transcriptional Regulator Arsr Family; ArsR Family Transcriptional Regulatory Protein; Arsenical Resistance Operon Repressor; Transcriptional Regulatory Protein; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; ArsR Family xin-Antitoxin System Antitoxin Component; Transcriptional Regulator Protein; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQEKRGRVKWCKLQPDALRAAS
VWMQGFGQFEPVNLDAFERFLEEELRDGE

Sequences:

>Translated_109_residues
MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQEKRGRVKWCKLQPDALRAAS
VWMQGFGQFEPVNLDAFERFLEEELRDGE
>Mature_109_residues
MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQEKRGRVKWCKLQPDALRAAS
VWMQGFGQFEPVNLDAFERFLEEELRDGE

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12312; Mature: 12312

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQ
CCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EKRGRVKWCKLQPDALRAASVWMQGFGQFEPVNLDAFERFLEEELRDGE
HHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQ
CCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EKRGRVKWCKLQPDALRAASVWMQGFGQFEPVNLDAFERFLEEELRDGE
HHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA