| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082411
Identifier: 99082411
GI number: 99082411
Start: 2712865
End: 2713323
Strand: Direct
Name: 99082411
Synonym: TM1040_2571
Alternate gene names: NA
Gene position: 2712865-2713323 (Clockwise)
Preceding gene: 99082410
Following gene: 99082412
Centisome position: 84.75
GC content: 64.27
Gene sequence:
>459_bases ATGTTTCGCGGCATTCCCGCAGCGCCGCTCGCGCTTGGCCTCGCTGGCCTCATTCCTTTTGTGTGGGGCGCCCTGACGCT GCTGGTGCCTGCATTGCAGTCGTGGGGGATCAGCGCGCTTGGCCCACGCTTTGTCGGTCCCTATGTGCAGCTGTTTTACG GCTCGGTGATCCTAAGCTTCATGTCCGGTGTGCTCTGGGGGTATGCCACGCGTGCCTCTGGCCGCCTGCAATCGGCGGCC TGCTACGCGCTTTCGGTGATCCCGGCGCTCTGGGCCTTCTTTATGACCGGCGGCGGCCCCGTCAGCGCGGGACTCAACCT GATCTGGGGCTTCCTCGGCCTGTTGCTCTTGGACATGATGTTCAGCCTGTGGCGCCTGACGCCCGCGTGGTGGGTTCGAC TGCGCGTGCTGCTCACCGCTATTGTGGTCCTGAGCCTCAGCATCGGCGTCTTCCTATGA
Upstream 100 bases:
>100_bases GCCTCATTCTTGGCTCCGAGCGCGTAGTGACATGGCTCAATCGCAGCTTTGCCGCCATCTTTGCAGCTCTCGCGCTGCGC TTGGCAATGGAGCGCAGCTG
Downstream 100 bases:
>100_bases GCGACAAGCAAACCATGGCGGTCTATGCAAAGGCCGCAGAAGACTACGCCAAGGGATTTGCCCGCACCAAGGACACCGTT CACGATCGCGATTATGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSFMSGVLWGYATRASGRLQSAA CYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMMFSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL
Sequences:
>Translated_152_residues MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSFMSGVLWGYATRASGRLQSAA CYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMMFSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL >Mature_152_residues MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSFMSGVLWGYATRASGRLQSAA CYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMMFSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16347; Mature: 16347
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHH MSGVLWGYATRASGRLQSAACYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMM HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH FSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHH MSGVLWGYATRASGRLQSAACYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMM HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH FSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA