| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is leuE [H]
Identifier: 99082410
GI number: 99082410
Start: 2712248
End: 2712865
Strand: Direct
Name: leuE [H]
Synonym: TM1040_2570
Alternate gene names: 99082410
Gene position: 2712248-2712865 (Clockwise)
Preceding gene: 99082409
Following gene: 99082411
Centisome position: 84.73
GC content: 60.52
Gene sequence:
>618_bases TTGATTTCCCTGCAATTTCTCCTGACCGCATTTGTCGTGGTCCTCGCGCCGGGTACCGGTGTGATCTACACTCTGGCTTT GGGTCTGGGGCGCGGACGCCGGGCCGCCCTCTGGGCCGCAGTAGGCTGTACTTTCGGTATCCTGCCGCATCTGATGGCCG CCACACTGGGGCTTGCGGCGGTGCTGCATTCCTCGGCCGTGCTGTTCCAAGGCATCAAGATCGCAGGTGTTCTCTACTTG CTCTACCTCGCTTGGCAGATGCTGAAATCCGATGGCGCGCTCTCGGTCTCTGCGGCACAGCCTGCCTCACAGCCGGGGAT TACGATCGCCAAACGTGGCGCCCTGATCAACATTCTGAATCCCAAGCTCTCGATCTTCTTTCTGGCACTGCTGCCGCCGT TCCTCTCCGGCAATACAGCCACCGCCACGCAGGAAATGGTCGCACTTGGTGGGATCTTCATGGCGATGACCTTTGCCGTC TTTGCGCTCTACGGTCTTTTTGCCGCGCAGGCCCGCAGCCTCATTCTTGGCTCCGAGCGCGTAGTGACATGGCTCAATCG CAGCTTTGCCGCCATCTTTGCAGCTCTCGCGCTGCGCTTGGCAATGGAGCGCAGCTGA
Upstream 100 bases:
>100_bases CTCTCGGGGCGCGAAGGGTGCTTGCAACTTCACCACGCGTGGCTACCTTGAAAGACACGCACCTAGGGCGTCACACGTCG TTTTCAGAGGAACAGCTGCT
Downstream 100 bases:
>100_bases TGTTTCGCGGCATTCCCGCAGCGCCGCTCGCGCTTGGCCTCGCTGGCCTCATTCCTTTTGTGTGGGGCGCCCTGACGCTG CTGGTGCCTGCATTGCAGTC
Product: lysine exporter protein LysE/YggA
Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MISLQFLLTAFVVVLAPGTGVIYTLALGLGRGRRAALWAAVGCTFGILPHLMAATLGLAAVLHSSAVLFQGIKIAGVLYL LYLAWQMLKSDGALSVSAAQPASQPGITIAKRGALINILNPKLSIFFLALLPPFLSGNTATATQEMVALGGIFMAMTFAV FALYGLFAAQARSLILGSERVVTWLNRSFAAIFAALALRLAMERS
Sequences:
>Translated_205_residues MISLQFLLTAFVVVLAPGTGVIYTLALGLGRGRRAALWAAVGCTFGILPHLMAATLGLAAVLHSSAVLFQGIKIAGVLYL LYLAWQMLKSDGALSVSAAQPASQPGITIAKRGALINILNPKLSIFFLALLPPFLSGNTATATQEMVALGGIFMAMTFAV FALYGLFAAQARSLILGSERVVTWLNRSFAAIFAALALRLAMERS >Mature_205_residues MISLQFLLTAFVVVLAPGTGVIYTLALGLGRGRRAALWAAVGCTFGILPHLMAATLGLAAVLHSSAVLFQGIKIAGVLYL LYLAWQMLKSDGALSVSAAQPASQPGITIAKRGALINILNPKLSIFFLALLPPFLSGNTATATQEMVALGGIFMAMTFAV FALYGLFAAQARSLILGSERVVTWLNRSFAAIFAALALRLAMERS
Specific function: Exporter of leucine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI48994979, Length=199, Percent_Identity=28.1407035175879, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI48994978, Length=215, Percent_Identity=27.4418604651163, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1786522, Length=193, Percent_Identity=25.9067357512953, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21556; Mature: 21556
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLQFLLTAFVVVLAPGTGVIYTLALGLGRGRRAALWAAVGCTFGILPHLMAATLGLAA CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLHSSAVLFQGIKIAGVLYLLYLAWQMLKSDGALSVSAAQPASQPGITIAKRGALINILN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCEEEECC PKLSIFFLALLPPFLSGNTATATQEMVALGGIFMAMTFAVFALYGLFAAQARSLILGSER CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VVTWLNRSFAAIFAALALRLAMERS HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MISLQFLLTAFVVVLAPGTGVIYTLALGLGRGRRAALWAAVGCTFGILPHLMAATLGLAA CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLHSSAVLFQGIKIAGVLYLLYLAWQMLKSDGALSVSAAQPASQPGITIAKRGALINILN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCEEEECC PKLSIFFLALLPPFLSGNTATATQEMVALGGIFMAMTFAVFALYGLFAAQARSLILGSER CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VVTWLNRSFAAIFAALALRLAMERS HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA