Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082404

Identifier: 99082404

GI number: 99082404

Start: 2706314

End: 2707018

Strand: Reverse

Name: 99082404

Synonym: TM1040_2564

Alternate gene names: NA

Gene position: 2707018-2706314 (Counterclockwise)

Preceding gene: 99082405

Following gene: 99082403

Centisome position: 84.57

GC content: 61.28

Gene sequence:

>705_bases
TTGGTATTCAGGCGCCGAGACAGACGCCCGCCGCTACGGGCGGCTGCGGAGTTTCTCTGGCCTCGCGGGGGCTGGGGAAG
GGCGTTTTTGTACGTCAAGCATCGGATCCGGCGCTTGCCTGACCATCCAGAACGCATCGCGCGCGGCATCTGGGCCGGGC
TTTTCACCACTTTTACGCCCTTTTACGGGGTTCACTTCATCGTTGCGGCCACCATTGCGCGGGTGATGAACGGCAATATG
CTTGCCGCACTCTCGGCGACGTTTTTTGGCAATCCGCTGACCTATGTGCCCATTGGGGTGATCTCGCTTCAGACCGGGCA
TTGGTTGTTGGGCAGCCAACCGGTGGCAGAGGTCGATGACACGCTTGCGGACAAGTTTCTCGCGGCAGGGTGGGATCTTT
GGTACAACGTCTATGCGGTGGCGACCGGGACACCGGTGGACTGGACCGGGCTCAAGGTCTTTTATGACGAGGTCTTTTAT
CCCTACATGATCGGCGGCATCATTCCGGGGATAATTGTGGCCACGGTGGGGTATATGCTCTCGGTGCCGGTGATCCGCAC
CTATCAGCAGCGCCGCCGTCGCAAGATCAAGGCGAAGTTCGACGCCATCAAGAAGCGGGCCGAGCTGGAGGCTGTGAACA
GTCCGCACCCGCCGCGCGGCACCCAACCTCCAAACCGCACCCCCAAGATCGGGCGCACGGAGTAG

Upstream 100 bases:

>100_bases
AGCTGAAAGCGACGTCGCCGCGGTCGCGCGCTACCGGGAAACGCCTGGAACGCAAGCCCGCACGATCTAGCCTCGTTAGA
CGAAGAATAGGGACGATTCT

Downstream 100 bases:

>100_bases
CCCCCCCGATACCGAGGCCGAGATGGCGGAGAATTGTATCACTTCGCCCCTTGTGCCTTGCCTCTTTGGCCTTCACCGCT
AGGGTCTGCTGCAACAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MVFRRRDRRPPLRAAAEFLWPRGGWGRAFLYVKHRIRRLPDHPERIARGIWAGLFTTFTPFYGVHFIVAATIARVMNGNM
LAALSATFFGNPLTYVPIGVISLQTGHWLLGSQPVAEVDDTLADKFLAAGWDLWYNVYAVATGTPVDWTGLKVFYDEVFY
PYMIGGIIPGIIVATVGYMLSVPVIRTYQQRRRRKIKAKFDAIKKRAELEAVNSPHPPRGTQPPNRTPKIGRTE

Sequences:

>Translated_234_residues
MVFRRRDRRPPLRAAAEFLWPRGGWGRAFLYVKHRIRRLPDHPERIARGIWAGLFTTFTPFYGVHFIVAATIARVMNGNM
LAALSATFFGNPLTYVPIGVISLQTGHWLLGSQPVAEVDDTLADKFLAAGWDLWYNVYAVATGTPVDWTGLKVFYDEVFY
PYMIGGIIPGIIVATVGYMLSVPVIRTYQQRRRRKIKAKFDAIKKRAELEAVNSPHPPRGTQPPNRTPKIGRTE
>Mature_234_residues
MVFRRRDRRPPLRAAAEFLWPRGGWGRAFLYVKHRIRRLPDHPERIARGIWAGLFTTFTPFYGVHFIVAATIARVMNGNM
LAALSATFFGNPLTYVPIGVISLQTGHWLLGSQPVAEVDDTLADKFLAAGWDLWYNVYAVATGTPVDWTGLKVFYDEVFY
PYMIGGIIPGIIVATVGYMLSVPVIRTYQQRRRRKIKAKFDAIKKRAELEAVNSPHPPRGTQPPNRTPKIGRTE

Specific function: Unknown

COG id: COG3216

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26511; Mature: 26511

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFRRRDRRPPLRAAAEFLWPRGGWGRAFLYVKHRIRRLPDHPERIARGIWAGLFTTFTP
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FYGVHFIVAATIARVMNGNMLAALSATFFGNPLTYVPIGVISLQTGHWLLGSQPVAEVDD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCEECCCCCHHHHHH
TLADKFLAAGWDLWYNVYAVATGTPVDWTGLKVFYDEVFYPYMIGGIIPGIIVATVGYML
HHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVPVIRTYQQRRRRKIKAKFDAIKKRAELEAVNSPHPPRGTQPPNRTPKIGRTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVFRRRDRRPPLRAAAEFLWPRGGWGRAFLYVKHRIRRLPDHPERIARGIWAGLFTTFTP
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FYGVHFIVAATIARVMNGNMLAALSATFFGNPLTYVPIGVISLQTGHWLLGSQPVAEVDD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCEECCCCCHHHHHH
TLADKFLAAGWDLWYNVYAVATGTPVDWTGLKVFYDEVFYPYMIGGIIPGIIVATVGYML
HHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVPVIRTYQQRRRRKIKAKFDAIKKRAELEAVNSPHPPRGTQPPNRTPKIGRTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA