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The map label for this gene is ydgD [C]

Identifier: 99082339

GI number: 99082339

Start: 2640633

End: 2641487

Strand: Reverse

Name: ydgD [C]

Synonym: TM1040_2499

Alternate gene names: 99082339

Gene position: 2641487-2640633 (Counterclockwise)

Preceding gene: 99082340

Following gene: 99082338

Centisome position: 82.52

GC content: 61.75

Gene sequence:

>855_bases
ATGTGGAGTTTGCCCGTGCTGCCGATTAAGAAATTGATTGTTAGTGGTGTTTTATGCGTGTTGTCTGCTGCTGCGGTGGC
GGGCACAACACTGCGCGGCAATGATACGCGTCTTAAAAGTCTTGAAACCACAGATGCAGGCCGAGACTGGGAAGCGGTAG
GGCGGCTGGATCGTGCGGGCGAGGGGTTCTGCACCGGGGCCTTGATTGCTCCGGATATCGTGCTGACGGCGGCGCATTGC
CTTTATGATCGCGACACCATGGCCCAGATCGACCCGACCTCAATCGAGTTTTTGGCGGGATGGCGCAACGGCCGAGCCTC
GGCCTATCGCGCGGTGAAGCGGGCGGTCCTGCATCCGCGCTATGTCTATGACGGGACACTGTCGGCAAAACGAGTCCGGA
ACGACATTGCCCTGTTGCAACTGCAACGCCCCATTCGCAACACTACCGTCACGCCATTTGAAACCGACGCGCGCCCCCGC
GAGGGGGCCCGGGTCGGTGTGGTGTCCTACGCGCAGGACCGCTCCGAGGCGCCCTCGCTCCAAGAGGTCTGCAAGGTGAT
TGCTCGTCAGGATGGTGTCCTGGTGATGTCCTGTGACGTGGACTTCGGGGCCTCTGGCGCCCCTGTGTTTTCGTTTGACG
CTGGACGCCCGCGGATCGTATCGGTGGTCTCAGCCAAGGCGCGTGTCGAGGGTTCTGCCGTTTCTCTGGGCGCGTCGCTG
GCCGAGGAACTGGCGCTTTTGCAGTCACAGCTGACCGGGGCCCATGTCGGCAGCCGGATGCCTCAGGGGGTTGGTCGCGT
TCAGGTCGGGGAACCGCGCCGCAGCGACATTGGTGCAAAATTCATTTCCAACTGA

Upstream 100 bases:

>100_bases
TGCGCTGAAGCTGCACAGGCGGCATCACAGAAAGGCGCGCGGAATCGTCCTTCTGCGCCCAACTTTTGCCCGAAGCGTTG
GCTAGGCTGTCGCATAGGGG

Downstream 100 bases:

>100_bases
ATTCGCCCCCTCTTGAAACAAAAATGACCCTTCATACATGGGAGGTACCCAAGGCGCCAAAGACTGGGCCTTGGATCAAT
CCACCCGTCCCGTGTTGGGA

Product: peptidase S1 and S6, chymotrypsin/Hap

Products: NA

Alternate protein names: Trypsin Domain Protein; Trypsin Domain-Containing Protein; Protease; Trypsin; Protease YdgD; S1/S6 Family Peptidase

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MWSLPVLPIKKLIVSGVLCVLSAAAVAGTTLRGNDTRLKSLETTDAGRDWEAVGRLDRAGEGFCTGALIAPDIVLTAAHC
LYDRDTMAQIDPTSIEFLAGWRNGRASAYRAVKRAVLHPRYVYDGTLSAKRVRNDIALLQLQRPIRNTTVTPFETDARPR
EGARVGVVSYAQDRSEAPSLQEVCKVIARQDGVLVMSCDVDFGASGAPVFSFDAGRPRIVSVVSAKARVEGSAVSLGASL
AEELALLQSQLTGAHVGSRMPQGVGRVQVGEPRRSDIGAKFISN

Sequences:

>Translated_284_residues
MWSLPVLPIKKLIVSGVLCVLSAAAVAGTTLRGNDTRLKSLETTDAGRDWEAVGRLDRAGEGFCTGALIAPDIVLTAAHC
LYDRDTMAQIDPTSIEFLAGWRNGRASAYRAVKRAVLHPRYVYDGTLSAKRVRNDIALLQLQRPIRNTTVTPFETDARPR
EGARVGVVSYAQDRSEAPSLQEVCKVIARQDGVLVMSCDVDFGASGAPVFSFDAGRPRIVSVVSAKARVEGSAVSLGASL
AEELALLQSQLTGAHVGSRMPQGVGRVQVGEPRRSDIGAKFISN
>Mature_284_residues
MWSLPVLPIKKLIVSGVLCVLSAAAVAGTTLRGNDTRLKSLETTDAGRDWEAVGRLDRAGEGFCTGALIAPDIVLTAAHC
LYDRDTMAQIDPTSIEFLAGWRNGRASAYRAVKRAVLHPRYVYDGTLSAKRVRNDIALLQLQRPIRNTTVTPFETDARPR
EGARVGVVSYAQDRSEAPSLQEVCKVIARQDGVLVMSCDVDFGASGAPVFSFDAGRPRIVSVVSAKARVEGSAVSLGASL
AEELALLQSQLTGAHVGSRMPQGVGRVQVGEPRRSDIGAKFISN

Specific function: Unknown

COG id: COG3591

COG function: function code E; V8-like Glu-specific endopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 30358; Mature: 30358

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSLPVLPIKKLIVSGVLCVLSAAAVAGTTLRGNDTRLKSLETTDAGRDWEAVGRLDRAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEECCCCCCCCHHHHHHHHCCC
EGFCTGALIAPDIVLTAAHCLYDRDTMAQIDPTSIEFLAGWRNGRASAYRAVKRAVLHPR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
YVYDGTLSAKRVRNDIALLQLQRPIRNTTVTPFETDARPREGARVGVVSYAQDRSEAPSL
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCH
QEVCKVIARQDGVLVMSCDVDFGASGAPVFSFDAGRPRIVSVVSAKARVEGSAVSLGASL
HHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCCEEHHHHHHHHCCCCHHHHHHHH
AEELALLQSQLTGAHVGSRMPQGVGRVQVGEPRRSDIGAKFISN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHCHHHHCC
>Mature Secondary Structure
MWSLPVLPIKKLIVSGVLCVLSAAAVAGTTLRGNDTRLKSLETTDAGRDWEAVGRLDRAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEECCCCCCCCHHHHHHHHCCC
EGFCTGALIAPDIVLTAAHCLYDRDTMAQIDPTSIEFLAGWRNGRASAYRAVKRAVLHPR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
YVYDGTLSAKRVRNDIALLQLQRPIRNTTVTPFETDARPREGARVGVVSYAQDRSEAPSL
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCH
QEVCKVIARQDGVLVMSCDVDFGASGAPVFSFDAGRPRIVSVVSAKARVEGSAVSLGASL
HHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCCEEHHHHHHHHCCCCHHHHHHHH
AEELALLQSQLTGAHVGSRMPQGVGRVQVGEPRRSDIGAKFISN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA