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The map label for this gene is hspB [H]

Identifier: 99082338

GI number: 99082338

Start: 2640025

End: 2640492

Strand: Reverse

Name: hspB [H]

Synonym: TM1040_2498

Alternate gene names: 99082338

Gene position: 2640492-2640025 (Counterclockwise)

Preceding gene: 99082339

Following gene: 99082337

Centisome position: 82.49

GC content: 59.19

Gene sequence:

>468_bases
ATGCGTACGTTTGATTTTGCTCCGCTGCACCGTGCAACTGTCGGCTTCGACCAGATTGCCGATTTAATGGACCGGGTGAT
GAGCTCGGATCTCCAGCAGCCAAGCTACCCCCCATACAACATTGAAAAAACCTCGGACGATGCCTACCGCATCTCGATCG
CTGTCGCGGGCTTTTCCGAAGACGAGTTGAACGTCGAGGTAAAAGAGCACGCCCTGGTCGTGTCCGCGCGCAAGTCCGAA
GAGAACGGCGAGCGCACCTACCTGCATCGCGGGATTGCAACCCGAGCCTTTGAACGCCGTTTCACCCTTGCAGATCATGT
GCGGGTGCAGGGCGCCAGCCACGGCGACGGCATGCTCCATATCGATCTCGTGCGAGAAGTGCCTGAGGCGCTGAAGCCGC
GCCGGATCGAGATTTCCTCCGCTGCGGCGTCCAAGCCCAAGGAAATTTCGGGCTCGACCGTGAACTGA

Upstream 100 bases:

>100_bases
GGAGGTACCCAAGGCGCCAAAGACTGGGCCTTGGATCAATCCACCCGTCCCGTGTTGGGAGGGCTTTATAGCAGTTATCG
CTCAAAGATGAGGATGAACC

Downstream 100 bases:

>100_bases
TCTGACGCAGGATGCGAGTTGCGTCCTATTCCGAGGGCTCCCGGCTGGTTAGACGGGAGCTCTTTTTATTCATGGATTTA
CGTTATTTACCAAGCGGTAG

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRTFDFAPLHRATVGFDQIADLMDRVMSSDLQQPSYPPYNIEKTSDDAYRISIAVAGFSEDELNVEVKEHALVVSARKSE
ENGERTYLHRGIATRAFERRFTLADHVRVQGASHGDGMLHIDLVREVPEALKPRRIEISSAAASKPKEISGSTVN

Sequences:

>Translated_155_residues
MRTFDFAPLHRATVGFDQIADLMDRVMSSDLQQPSYPPYNIEKTSDDAYRISIAVAGFSEDELNVEVKEHALVVSARKSE
ENGERTYLHRGIATRAFERRFTLADHVRVQGASHGDGMLHIDLVREVPEALKPRRIEISSAAASKPKEISGSTVN
>Mature_155_residues
MRTFDFAPLHRATVGFDQIADLMDRVMSSDLQQPSYPPYNIEKTSDDAYRISIAVAGFSEDELNVEVKEHALVVSARKSE
ENGERTYLHRGIATRAFERRFTLADHVRVQGASHGDGMLHIDLVREVPEALKPRRIEISSAAASKPKEISGSTVN

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=139, Percent_Identity=48.2014388489209, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI87082316, Length=143, Percent_Identity=39.8601398601399, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17311; Mature: 17311

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFDFAPLHRATVGFDQIADLMDRVMSSDLQQPSYPPYNIEKTSDDAYRISIAVAGFSE
CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
DELNVEVKEHALVVSARKSEENGERTYLHRGIATRAFERRFTLADHVRVQGASHGDGMLH
CCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCEEE
IDLVREVPEALKPRRIEISSAAASKPKEISGSTVN
HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTFDFAPLHRATVGFDQIADLMDRVMSSDLQQPSYPPYNIEKTSDDAYRISIAVAGFSE
CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
DELNVEVKEHALVVSARKSEENGERTYLHRGIATRAFERRFTLADHVRVQGASHGDGMLH
CCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCEEE
IDLVREVPEALKPRRIEISSAAASKPKEISGSTVN
HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8808920; 12597275 [H]