Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is sam [H]

Identifier: 99082336

GI number: 99082336

Start: 2638410

End: 2639303

Strand: Direct

Name: sam [H]

Synonym: TM1040_2496

Alternate gene names: 99082336

Gene position: 2638410-2639303 (Clockwise)

Preceding gene: 99082335

Following gene: 99082343

Centisome position: 82.43

GC content: 59.96

Gene sequence:

>894_bases
ATGACTCAATCGCTTCCTACCCCGCTCAAGGCGGCTGGCCTCATGGTCATCGCCGGAGCCTGCTTTGCGCTGGTGAACAC
CGCACTGCAATCGGCCACGATGCTGCATGGGGCCTCTGCTCCGATGGTGACCTTCTGGCAGTATCTGATCGCGCTTCTGT
TTTACATCCCATGGATCTGGCGCAACTGGACTGCCGTTCTGTCGACCCGGCAAATGATCACCCATGTGATCCGGGTCGTG
CTGGCCGTTGCCGGTGTGCAACTCTGGACGCTTGGGCTGGCCCATGTGCCAATCTGGCAGGCGATTGCCTTGATCTTGCT
TTCGCCCTTTTTTGTCACCATCGGCGCGGGTCTTTTCCTCGGCGAAGATGTTTCCTTGCACCGCTGGGGCGCTGTTGTTG
TGGGCATCTTTGGTGGCATGGTGATCCTGGCCCCGTGGTCAGATCGCTTCCAGATCGCGGCCCTTCTGCCAGTCGCTGCG
GCGGCCTTTTGGGCTGCGAGTTCCGTTGTGACCAAGCACCTCACACGGCGCGATAGCACCGAGACGGTCACGATCTATCT
GCTGCTGCTCCTCAGCCCTGCAAATGCGCTCCTGTCACTTGGTGGCGGCTTTGCACTGCCAGAAGGCACTATCTGGCTTG
TGATTGGCGCGGGACTGTTGACGGCTCTGGCGCAGCATAGCCTGGTGCGGGCCTACACGCTGGCAGACGCAGCGTTCCTT
CAACCCTTTGATCACCTGAAACTGGTCTTCAACGTGGGGCTGGGCGCAGTTGTCTTTGGGTTCTTGCCGGATGGCAACAT
GTGGCTGGGCACCGCGCTGATCATTGTTGCAAGCGCCTATCTGCTGAACAGAGAGGCCCGTGCTAAACCGGGTTCAGCCG
CGCAAAACGCCTGA

Upstream 100 bases:

>100_bases
GAGAATGGAGAGACCCGCGCCCTTCGCCATGTGCAGGAGGGCTTTGGGTCTATTCGTTTGCCTTGGGTCAATTGCGGACC
GAGGAAAGGACAACACGCAG

Downstream 100 bases:

>100_bases
GACCATCTCGGCAAATGGGGCGCGGGCCTGAACCTTAGCCGTACTCAGCACGCTGGCATCGTAATATCGCCCCCAGGCGT
CGTGCGTACATCCCATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTQSLPTPLKAAGLMVIAGACFALVNTALQSATMLHGASAPMVTFWQYLIALLFYIPWIWRNWTAVLSTRQMITHVIRVV
LAVAGVQLWTLGLAHVPIWQAIALILLSPFFVTIGAGLFLGEDVSLHRWGAVVVGIFGGMVILAPWSDRFQIAALLPVAA
AAFWAASSVVTKHLTRRDSTETVTIYLLLLLSPANALLSLGGGFALPEGTIWLVIGAGLLTALAQHSLVRAYTLADAAFL
QPFDHLKLVFNVGLGAVVFGFLPDGNMWLGTALIIVASAYLLNREARAKPGSAAQNA

Sequences:

>Translated_297_residues
MTQSLPTPLKAAGLMVIAGACFALVNTALQSATMLHGASAPMVTFWQYLIALLFYIPWIWRNWTAVLSTRQMITHVIRVV
LAVAGVQLWTLGLAHVPIWQAIALILLSPFFVTIGAGLFLGEDVSLHRWGAVVVGIFGGMVILAPWSDRFQIAALLPVAA
AAFWAASSVVTKHLTRRDSTETVTIYLLLLLSPANALLSLGGGFALPEGTIWLVIGAGLLTALAQHSLVRAYTLADAAFL
QPFDHLKLVFNVGLGAVVFGFLPDGNMWLGTALIIVASAYLLNREARAKPGSAAQNA
>Mature_296_residues
TQSLPTPLKAAGLMVIAGACFALVNTALQSATMLHGASAPMVTFWQYLIALLFYIPWIWRNWTAVLSTRQMITHVIRVVL
AVAGVQLWTLGLAHVPIWQAIALILLSPFFVTIGAGLFLGEDVSLHRWGAVVVGIFGGMVILAPWSDRFQIAALLPVAAA
AFWAASSVVTKHLTRRDSTETVTIYLLLLLSPANALLSLGGGFALPEGTIWLVIGAGLLTALAQHSLVRAYTLADAAFLQ
PFDHLKLVFNVGLGAVVFGFLPDGNMWLGTALIIVASAYLLNREARAKPGSAAQNA

Specific function: Transports S-adenosylmethionine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31707; Mature: 31576

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSLPTPLKAAGLMVIAGACFALVNTALQSATMLHGASAPMVTFWQYLIALLFYIPWIW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RNWTAVLSTRQMITHVIRVVLAVAGVQLWTLGLAHVPIWQAIALILLSPFFVTIGAGLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHC
GEDVSLHRWGAVVVGIFGGMVILAPWSDRFQIAALLPVAAAAFWAASSVVTKHLTRRDST
CCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ETVTIYLLLLLSPANALLSLGGGFALPEGTIWLVIGAGLLTALAQHSLVRAYTLADAAFL
CHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
QPFDHLKLVFNVGLGAVVFGFLPDGNMWLGTALIIVASAYLLNREARAKPGSAAQNA
CHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC
>Mature Secondary Structure 
TQSLPTPLKAAGLMVIAGACFALVNTALQSATMLHGASAPMVTFWQYLIALLFYIPWIW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RNWTAVLSTRQMITHVIRVVLAVAGVQLWTLGLAHVPIWQAIALILLSPFFVTIGAGLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHC
GEDVSLHRWGAVVVGIFGGMVILAPWSDRFQIAALLPVAAAAFWAASSVVTKHLTRRDST
CCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ETVTIYLLLLLSPANALLSLGGGFALPEGTIWLVIGAGLLTALAQHSLVRAYTLADAAFL
CHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
QPFDHLKLVFNVGLGAVVFGFLPDGNMWLGTALIIVASAYLLNREARAKPGSAAQNA
CHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA