Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082343

Identifier: 99082343

GI number: 99082343

Start: 2645583

End: 2646305

Strand: Direct

Name: 99082343

Synonym: TM1040_2503

Alternate gene names: NA

Gene position: 2645583-2646305 (Clockwise)

Preceding gene: 99082336

Following gene: 99082344

Centisome position: 82.65

GC content: 58.51

Gene sequence:

>723_bases
ATGATTTGGATCGAGCGCCTGAGCCAGTTTTCTACGTGGGATTTCATAAGCCTGGCCTGCTATTTGCTGGGCTGGCTCTG
GATTGGCTGGCGCATCGAAAATCCCAGCAAATCGCGCCCGTCCGTCTCGATCCTGATGGCAGATTTTCGACGCGAGTGGA
TGAAAGAGATGGTGACGCGCTCGCCCCGGATATTTGATTCGCAAGTCATCTCCTCCCTGCGCCAAGCCACGGCATTCTTC
GCGTCGGCCACCATGCTCGCGCTTGGGGCGGGGCTTGCGCTCATTGGCAACACAGATCAGCTTGCAGGTGTTGCGCAGGA
TCTGGCACTCGGGCAAACCCCGGATTTTGTCTGGGAGATCAAGATCATCCTCGTTCTGGCTGCGCTCACCAATGCGTTTC
TCTCTTTTGTCTGGTCGCATCGGCTCTTTGGCTATTGTTCGGTGCTGATGGCCGCCGTCCCCAATGAACCGAGCGACCCC
CGTGCCTATCCGCGCGCCTGCCAAGCCGCAGAGATCAACATCACTGCCGCGCGCAGCTTCAATCGCGGTCTGCGCGCCAC
GTATTTTTCACTGGCCGGACTGGCATGGCTGGTGAGCGCCGAAGCCCTCATTATCGCCACGGTCATCACGCTGGCCGTGC
TCTACAGGCGAGAGTTCATTTCCCGGTCACGTCGCATCCTGATGCAATCAAAACCCGAAACCACGTCGCCCACCGAATTG
TGA

Upstream 100 bases:

>100_bases
TGGGGGGTGGCATCTCCATGCGGGCTCTCCTCTTTGGTAAAATAATATTACCAATCTATCACCTCTGGCAAGGCTGAACT
GACTAAGCTAGGGTCGCCCT

Downstream 100 bases:

>100_bases
CCTGCACAGGTCGCAACATCGGCTAGACTGGCCCCATGCTGAGATATGTCCTGATCCCGTTCTTGGGCCTGGCCGGCCCA
TTTGCTGCCCATGCTGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIWIERLSQFSTWDFISLACYLLGWLWIGWRIENPSKSRPSVSILMADFRREWMKEMVTRSPRIFDSQVISSLRQATAFF
ASATMLALGAGLALIGNTDQLAGVAQDLALGQTPDFVWEIKIILVLAALTNAFLSFVWSHRLFGYCSVLMAAVPNEPSDP
RAYPRACQAAEINITAARSFNRGLRATYFSLAGLAWLVSAEALIIATVITLAVLYRREFISRSRRILMQSKPETTSPTEL

Sequences:

>Translated_240_residues
MIWIERLSQFSTWDFISLACYLLGWLWIGWRIENPSKSRPSVSILMADFRREWMKEMVTRSPRIFDSQVISSLRQATAFF
ASATMLALGAGLALIGNTDQLAGVAQDLALGQTPDFVWEIKIILVLAALTNAFLSFVWSHRLFGYCSVLMAAVPNEPSDP
RAYPRACQAAEINITAARSFNRGLRATYFSLAGLAWLVSAEALIIATVITLAVLYRREFISRSRRILMQSKPETTSPTEL
>Mature_240_residues
MIWIERLSQFSTWDFISLACYLLGWLWIGWRIENPSKSRPSVSILMADFRREWMKEMVTRSPRIFDSQVISSLRQATAFF
ASATMLALGAGLALIGNTDQLAGVAQDLALGQTPDFVWEIKIILVLAALTNAFLSFVWSHRLFGYCSVLMAAVPNEPSDP
RAYPRACQAAEINITAARSFNRGLRATYFSLAGLAWLVSAEALIIATVITLAVLYRREFISRSRRILMQSKPETTSPTEL

Specific function: Unknown

COG id: COG3821

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26918; Mature: 26918

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWIERLSQFSTWDFISLACYLLGWLWIGWRIENPSKSRPSVSILMADFRREWMKEMVTR
CCHHHHHHHCCCHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
SPRIFDSQVISSLRQATAFFASATMLALGAGLALIGNTDQLAGVAQDLALGQTPDFVWEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCCHHHHH
KIILVLAALTNAFLSFVWSHRLFGYCSVLMAAVPNEPSDPRAYPRACQAAEINITAARSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEHHHH
NRGLRATYFSLAGLAWLVSAEALIIATVITLAVLYRREFISRSRRILMQSKPETTSPTEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIWIERLSQFSTWDFISLACYLLGWLWIGWRIENPSKSRPSVSILMADFRREWMKEMVTR
CCHHHHHHHCCCHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
SPRIFDSQVISSLRQATAFFASATMLALGAGLALIGNTDQLAGVAQDLALGQTPDFVWEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCCHHHHH
KIILVLAALTNAFLSFVWSHRLFGYCSVLMAAVPNEPSDPRAYPRACQAAEINITAARSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEHHHH
NRGLRATYFSLAGLAWLVSAEALIIATVITLAVLYRREFISRSRRILMQSKPETTSPTEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA