Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082335

Identifier: 99082335

GI number: 99082335

Start: 2635844

End: 2638015

Strand: Direct

Name: 99082335

Synonym: TM1040_2495

Alternate gene names: NA

Gene position: 2635844-2638015 (Clockwise)

Preceding gene: 99082333

Following gene: 99082336

Centisome position: 82.35

GC content: 59.02

Gene sequence:

>2172_bases
ATGTCCCTGCGCCTAGTGTGCCTGACCTCCGCCCTCGCGCTGACCGCCGGTTTTGCGCAGGCTGAAAAAGCCTTCAACCG
GATCGCGTCTTTCCCCGTCATCAAGAACATGGCCGAAGGTGCCGACCAGAGCCGCGAAAGCTCGCCCGAGATCATCGACG
TGACCGCCGATGGCATGACGCTGGTCTATACCGACAGCCCGCTGGGCGCGCTTGGGATGATCGACATCACCGATGCCGCC
AACCCGGTGCCCAAAGGCAATATCGCCCTTCCGGGCGAGCCCACCTCGGTCGCAGTGGTCGGTACCATCGCATATGTCGG
GGTCAACACCTCGGAGAGCTACACCCAGCCTTCCGGGCAAGTCATGGCCTTTGACACCGCAACAGGCGCGGAACTTGCCT
CCTGTGATTTGGGCGGTCAGCCGGACTCCCTCGCAAAATCCAAGGACGGCGCCTTCCTGTCCATCGCAATCGAAAACGAA
CGCGACGAAGACCTGAATGACGGGATCATTCCGCAATTGCCCGCAGGCAACCTCGTTATGATCAACACCACGCAAGACGG
CCTGAACTGCGCCAGCATGAAGATGGTGGATCTGACCGGTCTGGCCGAGATCGCAGGATCGGACCCGGAGCCAGAGTATG
TCTCGATCAACAACCTCGACGAGACGGTTGTGACGCTGCAAGAGAACAACCACATGGTCGTCGTGTCCAGGGATGGTGAG
ATTCTCAGTCACTTCTCCGCAGGCGCCGTGGACCTCGATGGCATTGATGCCACCGACGAGCGCGGTGCACTGATCTTTGA
CGAAAGCCAGAAGGGGCGCCTGCGCGAACCTGATGCTGTGACCTGGATTGACGCAGATCACTTTGCCACCGCAAACGAGG
GGGACTACAACGGCGGTTCGCGCGGTTGGACCATCTTCCACAAAGACGGCTCTGTGGTCTATGACTCTGGCGTTTCTTTT
GAGCATGCGATCATCCAGATCGGCCACTACCCGGACAAGCGTTCCGATGCCAAAGGTGTCGAACCGGAATCTGTGACCTT
CGCAGAGTTTGACGGCACACCTTTCGTGTTTGTCGGGGCAGAGCGCGCTTCGGTTGTTGGCGTCTATGACGTCACCGACC
CGGCAAAACCGGTTCTGACACAGTTGCTGCCCTCTGGTACCGGCCCCGAAGGCTATGTGACCATTCCCGAGCGCGGCCTT
CTTGTTTCAGCCAACGAGAAAGACCTCCTCGAAGACGGTGGCGCACGGGCGCATGTGATGCTCTTTGAGCTTCAGGATGG
CGCAGCCACATATCCTCATCTGACCTCGGCAGGAGCCAAAGAGCTGATCGGCTGGGGCGCCATCTCCGGCATGGTTGCGG
ATGAAGACGGTATGATCTGGGCGGTCAATGATAGCTTTTACGGCTTCCAGCCCTCGATCTTCAAGATTGACCCCTCTCAG
ACCCCAGCGCGCATCACCGATGTGATCCGCATTCATCGCGCCAATGGCGACGCTGCGCAAAAACTCGACCTCGAAGGGAT
CACGCTTGATGGCGAAGGCGGCTTCTATGTGGCGTCCGAGGGCCGCACGGAACGCGCGATCCCGCACGCGATCTATCACG
TCAGCGCCGAGGGCCTGATCAAAACCAACAAGGGTGAAATCGCGATCCCCGCAGAGCTGCAGTCCGTCGAGAAGCGCTTT
GGCTTTGAAGGCATCACCAAGGTTGGCAACACGCTCTGGATGGCGGTGCAGCGTGAGTGGAAAGACGATCCCGAAAACCA
TGTAAAGCTGGTTTCCTACAATCTGGATACCAAGGAATGGGGCGCCGTTCTTTATCCAAAGGCAGCGCCGGCCACCGGCT
GGGTTGGTCTGTCGGAAATCGTGGCGCATGGCGATCATGTCTATGTGATTGAGCGCGACAACCAGCATGATGACCGCGCA
GTCACCAAGAAGATCTATCGCATTGCGCTCTCGGATATGGTTCCTGCCCCGCTTGGCAGCGATCTCCCTGTCGTGACAAA
GGAAGAGGTCCGCGACCTGCTGCCTGACCTGAAATCCACCGGCGGCTATGTGCTCGACAAGGTTGAAGGTTTGGCCATCC
TGGCAGACGGCACCGCTTGGGTGTCGACCGACAATGACGGTGTCGATGACAGCTCTGGCGAGACGATGTTCTGGTCGTTC
AAGGTCGACTGA

Upstream 100 bases:

>100_bases
GCTTACACAGACGTCACGAAACATACAAAAAACCGTTGCGAATAGTTTGCACAGCGCGGGCATGGCCTTGGCATCGATTT
CATTCCTACAGGAGCTGCCG

Downstream 100 bases:

>100_bases
TCCGACCCGCGATCTGTCCGGCGCCTGCCATCATGGCGCCGACGTCGCCGCACAGCAAAGGGGTCCCTAGCGGGGCCTCT
TTTTTGCATCTTACGTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein; Endonuclease/Exonuclease/Phosphatase; Alkaline Phosphatase-Like Protein; Alkaline Phosphatase Protein; 5-Nucleotidase Domain-Containing Protein; Atypical Alkaline Phosphatase With Phytase-Like Insertion; 5-Nucleotidase Domain Protein

Number of amino acids: Translated: 723; Mature: 722

Protein sequence:

>723_residues
MSLRLVCLTSALALTAGFAQAEKAFNRIASFPVIKNMAEGADQSRESSPEIIDVTADGMTLVYTDSPLGALGMIDITDAA
NPVPKGNIALPGEPTSVAVVGTIAYVGVNTSESYTQPSGQVMAFDTATGAELASCDLGGQPDSLAKSKDGAFLSIAIENE
RDEDLNDGIIPQLPAGNLVMINTTQDGLNCASMKMVDLTGLAEIAGSDPEPEYVSINNLDETVVTLQENNHMVVVSRDGE
ILSHFSAGAVDLDGIDATDERGALIFDESQKGRLREPDAVTWIDADHFATANEGDYNGGSRGWTIFHKDGSVVYDSGVSF
EHAIIQIGHYPDKRSDAKGVEPESVTFAEFDGTPFVFVGAERASVVGVYDVTDPAKPVLTQLLPSGTGPEGYVTIPERGL
LVSANEKDLLEDGGARAHVMLFELQDGAATYPHLTSAGAKELIGWGAISGMVADEDGMIWAVNDSFYGFQPSIFKIDPSQ
TPARITDVIRIHRANGDAAQKLDLEGITLDGEGGFYVASEGRTERAIPHAIYHVSAEGLIKTNKGEIAIPAELQSVEKRF
GFEGITKVGNTLWMAVQREWKDDPENHVKLVSYNLDTKEWGAVLYPKAAPATGWVGLSEIVAHGDHVYVIERDNQHDDRA
VTKKIYRIALSDMVPAPLGSDLPVVTKEEVRDLLPDLKSTGGYVLDKVEGLAILADGTAWVSTDNDGVDDSSGETMFWSF
KVD

Sequences:

>Translated_723_residues
MSLRLVCLTSALALTAGFAQAEKAFNRIASFPVIKNMAEGADQSRESSPEIIDVTADGMTLVYTDSPLGALGMIDITDAA
NPVPKGNIALPGEPTSVAVVGTIAYVGVNTSESYTQPSGQVMAFDTATGAELASCDLGGQPDSLAKSKDGAFLSIAIENE
RDEDLNDGIIPQLPAGNLVMINTTQDGLNCASMKMVDLTGLAEIAGSDPEPEYVSINNLDETVVTLQENNHMVVVSRDGE
ILSHFSAGAVDLDGIDATDERGALIFDESQKGRLREPDAVTWIDADHFATANEGDYNGGSRGWTIFHKDGSVVYDSGVSF
EHAIIQIGHYPDKRSDAKGVEPESVTFAEFDGTPFVFVGAERASVVGVYDVTDPAKPVLTQLLPSGTGPEGYVTIPERGL
LVSANEKDLLEDGGARAHVMLFELQDGAATYPHLTSAGAKELIGWGAISGMVADEDGMIWAVNDSFYGFQPSIFKIDPSQ
TPARITDVIRIHRANGDAAQKLDLEGITLDGEGGFYVASEGRTERAIPHAIYHVSAEGLIKTNKGEIAIPAELQSVEKRF
GFEGITKVGNTLWMAVQREWKDDPENHVKLVSYNLDTKEWGAVLYPKAAPATGWVGLSEIVAHGDHVYVIERDNQHDDRA
VTKKIYRIALSDMVPAPLGSDLPVVTKEEVRDLLPDLKSTGGYVLDKVEGLAILADGTAWVSTDNDGVDDSSGETMFWSF
KVD
>Mature_722_residues
SLRLVCLTSALALTAGFAQAEKAFNRIASFPVIKNMAEGADQSRESSPEIIDVTADGMTLVYTDSPLGALGMIDITDAAN
PVPKGNIALPGEPTSVAVVGTIAYVGVNTSESYTQPSGQVMAFDTATGAELASCDLGGQPDSLAKSKDGAFLSIAIENER
DEDLNDGIIPQLPAGNLVMINTTQDGLNCASMKMVDLTGLAEIAGSDPEPEYVSINNLDETVVTLQENNHMVVVSRDGEI
LSHFSAGAVDLDGIDATDERGALIFDESQKGRLREPDAVTWIDADHFATANEGDYNGGSRGWTIFHKDGSVVYDSGVSFE
HAIIQIGHYPDKRSDAKGVEPESVTFAEFDGTPFVFVGAERASVVGVYDVTDPAKPVLTQLLPSGTGPEGYVTIPERGLL
VSANEKDLLEDGGARAHVMLFELQDGAATYPHLTSAGAKELIGWGAISGMVADEDGMIWAVNDSFYGFQPSIFKIDPSQT
PARITDVIRIHRANGDAAQKLDLEGITLDGEGGFYVASEGRTERAIPHAIYHVSAEGLIKTNKGEIAIPAELQSVEKRFG
FEGITKVGNTLWMAVQREWKDDPENHVKLVSYNLDTKEWGAVLYPKAAPATGWVGLSEIVAHGDHVYVIERDNQHDDRAV
TKKIYRIALSDMVPAPLGSDLPVVTKEEVRDLLPDLKSTGGYVLDKVEGLAILADGTAWVSTDNDGVDDSSGETMFWSFK
VD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77328; Mature: 77197

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRLVCLTSALALTAGFAQAEKAFNRIASFPVIKNMAEGADQSRESSPEIIDVTADGMT
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCEE
LVYTDSPLGALGMIDITDAANPVPKGNIALPGEPTSVAVVGTIAYVGVNTSESYTQPSGQ
EEEECCCCCCEEEEEECCCCCCCCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
VMAFDTATGAELASCDLGGQPDSLAKSKDGAFLSIAIENERDEDLNDGIIPQLPAGNLVM
EEEEECCCCCCEEECCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE
INTTQDGLNCASMKMVDLTGLAEIAGSDPEPEYVSINNLDETVVTLQENNHMVVVSRDGE
EECCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCH
ILSHFSAGAVDLDGIDATDERGALIFDESQKGRLREPDAVTWIDADHFATANEGDYNGGS
HHHHCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
RGWTIFHKDGSVVYDSGVSFEHAIIQIGHYPDKRSDAKGVEPESVTFAEFDGTPFVFVGA
CCEEEEECCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC
ERASVVGVYDVTDPAKPVLTQLLPSGTGPEGYVTIPERGLLVSANEKDLLEDGGARAHVM
CCCEEEEEEECCCCHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCHHHHHCCCCEEEEE
LFELQDGAATYPHLTSAGAKELIGWGAISGMVADEDGMIWAVNDSFYGFQPSIFKIDPSQ
EEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCEEEEECCCCCCCCCEEEEECCCC
TPARITDVIRIHRANGDAAQKLDLEGITLDGEGGFYVASEGRTERAIPHAIYHVSAEGLI
CCHHHEEEEEEEECCCCHHHEEECCEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCEE
KTNKGEIAIPAELQSVEKRFGFEGITKVGNTLWMAVQREWKDDPENHVKLVSYNLDTKEW
EECCCCEEECHHHHHHHHHHCCHHHHHHCCEEEEEEHHHCCCCCCCCEEEEEEECCCHHC
GAVLYPKAAPATGWVGLSEIVAHGDHVYVIERDNQHDDRAVTKKIYRIALSDMVPAPLGS
CEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
DLPVVTKEEVRDLLPDLKSTGGYVLDKVEGLAILADGTAWVSTDNDGVDDSSGETMFWSF
CCCEECHHHHHHHHHHHHHCCCEEEECCCCEEEEECCEEEEECCCCCCCCCCCCEEEEEE
KVD
EEC
>Mature Secondary Structure 
SLRLVCLTSALALTAGFAQAEKAFNRIASFPVIKNMAEGADQSRESSPEIIDVTADGMT
CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCEE
LVYTDSPLGALGMIDITDAANPVPKGNIALPGEPTSVAVVGTIAYVGVNTSESYTQPSGQ
EEEECCCCCCEEEEEECCCCCCCCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
VMAFDTATGAELASCDLGGQPDSLAKSKDGAFLSIAIENERDEDLNDGIIPQLPAGNLVM
EEEEECCCCCCEEECCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE
INTTQDGLNCASMKMVDLTGLAEIAGSDPEPEYVSINNLDETVVTLQENNHMVVVSRDGE
EECCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCH
ILSHFSAGAVDLDGIDATDERGALIFDESQKGRLREPDAVTWIDADHFATANEGDYNGGS
HHHHCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
RGWTIFHKDGSVVYDSGVSFEHAIIQIGHYPDKRSDAKGVEPESVTFAEFDGTPFVFVGA
CCEEEEECCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC
ERASVVGVYDVTDPAKPVLTQLLPSGTGPEGYVTIPERGLLVSANEKDLLEDGGARAHVM
CCCEEEEEEECCCCHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCHHHHHCCCCEEEEE
LFELQDGAATYPHLTSAGAKELIGWGAISGMVADEDGMIWAVNDSFYGFQPSIFKIDPSQ
EEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCEEEEECCCCCCCCCEEEEECCCC
TPARITDVIRIHRANGDAAQKLDLEGITLDGEGGFYVASEGRTERAIPHAIYHVSAEGLI
CCHHHEEEEEEEECCCCHHHEEECCEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCEE
KTNKGEIAIPAELQSVEKRFGFEGITKVGNTLWMAVQREWKDDPENHVKLVSYNLDTKEW
EECCCCEEECHHHHHHHHHHCCHHHHHHCCEEEEEEHHHCCCCCCCCEEEEEEECCCHHC
GAVLYPKAAPATGWVGLSEIVAHGDHVYVIERDNQHDDRAVTKKIYRIALSDMVPAPLGS
CEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
DLPVVTKEEVRDLLPDLKSTGGYVLDKVEGLAILADGTAWVSTDNDGVDDSSGETMFWSF
CCCEECHHHHHHHHHHHHHCCCEEEECCCCEEEEECCEEEEECCCCCCCCCCCCEEEEEE
KVD
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA