BacMap

Definition	Ruegeria sp. TM1040, complete genome.
Accession	NC_008044
Length	3,200,938

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The map label for this gene is gabD [H]

Identifier: 99082333

GI number: 99082333

Start: 2633749

End: 2635221

Strand: Direct

Name: gabD [H]

Synonym: TM1040_2493

Alternate gene names: 99082333

Gene position: 2633749-2635221 (Clockwise)

Preceding gene: 99082328

Following gene: 99082335

Centisome position: 82.28

GC content: 58.72

Gene sequence:

>1473_bases
ATGCTCGACGCGACAACCGACCTGAAATCCCTTCTGGCGGACCCCACCCTGCTGGAAGACCGGGCCTACATCAATGGCGC
TTTTGTCGCTGGCGAGGGCACATTTGAAGTGACCAACCCGGCGCGCGGTGATGTGATCGCCAATGTGGCGGATGTCAGCC
GCATGCAAGCCCGCGACGCCATTGCAGCAGCACAGGGCGCGCAAAAGGAATGGGCGAAATGGACTGGCAAGGAGCGCGCA
GGCGTTCTGCGCAAATGGTTCGACCTGATGATGGCCCATCAGGAAGATCTCGCCGTGATCCTGACGGCTGAAATGGGCAA
GCCGCTGGCCGAGGCACGCGGCGAAATCGCCTACGGTGCCTCTTTCATTGAATTCTTTGCCGAAGAGGCCAAGCGCGTCT
ATGGCGAAACCATTCCTGGTCACCAACGCGACAAACGGATCACCGTGATCAAGCAACCCATTGGCGTTGCCGCTTCGATC
ACGCCATGGAATTTCCCCAACGCCATGATCACCCGCAAGGCAGGGCCGGCACTGGCGGCCGGCTGTGCCTTTGTGGCGCG
CCCGGCCTCTGAAACACCGCTCTCCGCCACCGCACTCGCCGTATTGGCAGAACGCGCGGGCATCCCTGCGGGTGTTTTCA
ATGTCATCCCCGCTTCGGACGCCTCCGGCATTGGCAAGGAATTCTGCGAGAACCCGATTGTGCGCAAGCTGACGTTTACC
GGGTCAACCAACGTCGGTCGAATCCTGCTCCGCCAAGCAGCGGATCAGGTGATGAAATGCTCCATGGAGCTCGGCGGCAA
CGCACCTTTCATCGTGTTCGATGACGCCGATCTCGATGCGGCGGTCGAGGGCGCCATCATGTGCAAGTTCCGCAATAATG
GCCAAACCTGCGTCTGTGCCAACCGGATCTATGTGCAGTCTGGGATCTATGATGCGTTTGCCGCCAAGCTGAAGGAAAAA
GTCGAGGCCATGAAGGTCGGAGACGGGCTTGAGGATGGCACGCACTTTGGCCCATTGATCTCTGAGGCTGCAGTCAAGAA
GGTCGAAGACCACATCGCGGATGCCATGGACAAGGGTGCCGAGGTAATCCTAGGCGGCGCGCCATCAGAGCTCGGTGGCA
CCTTCTTTGAACCCACCATCGTGACCGGCGCGACACCGGACATGGCTTTCGCGCAGGATGAGACCTTTGGCCCGCTCGCG
CCGCTCTTCAAGTTTGAGACCGAAGACGAGGTGATCGAGATGGCGAATGACACCATCTTTGGCCTTGCATCCTATTTCTA
TGCCAAGGATCTGAGCCGCGTGTACAAGGTCGCCGAGGCGCTGGAATACGGAATTGTGGGGATCAATACAGGGATTATTT
CTACCGAGCTTGCGCCCTTTGGAGGTGTAAAACAATCCGGGCTTGGACGGGAAGGCAGCCATCACGGCATCGAGGACTAT
CTCGAAATGAAGTACCTCTGCATGTCCGTTTAA

Upstream 100 bases:

>100_bases
TTTCCCTTAATATGTTAAGCTTATGGACTTATCGGTGTCACTGGACAACATTAGGCCCAACTGCTTTTGATTTGCGAGAC
TCGAATTTGCGGAGGAACCG

Downstream 100 bases:

>100_bases
ACCCCTTGACCGTAAAATGAATCTCAGGCGGCTGGGGGTTCGATCCCGGCCGCCAACGCCCGACACAGACGACCAATTGC
ATTGTCCCAGGCAGAAACCT

Product: succinate semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MLDATTDLKSLLADPTLLEDRAYINGAFVAGEGTFEVTNPARGDVIANVADVSRMQARDAIAAAQGAQKEWAKWTGKERA
GVLRKWFDLMMAHQEDLAVILTAEMGKPLAEARGEIAYGASFIEFFAEEAKRVYGETIPGHQRDKRITVIKQPIGVAASI
TPWNFPNAMITRKAGPALAAGCAFVARPASETPLSATALAVLAERAGIPAGVFNVIPASDASGIGKEFCENPIVRKLTFT
GSTNVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIMCKFRNNGQTCVCANRIYVQSGIYDAFAAKLKEK
VEAMKVGDGLEDGTHFGPLISEAAVKKVEDHIADAMDKGAEVILGGAPSELGGTFFEPTIVTGATPDMAFAQDETFGPLA
PLFKFETEDEVIEMANDTIFGLASYFYAKDLSRVYKVAEALEYGIVGINTGIISTELAPFGGVKQSGLGREGSHHGIEDY
LEMKYLCMSV

Sequences:

>Translated_490_residues
MLDATTDLKSLLADPTLLEDRAYINGAFVAGEGTFEVTNPARGDVIANVADVSRMQARDAIAAAQGAQKEWAKWTGKERA
GVLRKWFDLMMAHQEDLAVILTAEMGKPLAEARGEIAYGASFIEFFAEEAKRVYGETIPGHQRDKRITVIKQPIGVAASI
TPWNFPNAMITRKAGPALAAGCAFVARPASETPLSATALAVLAERAGIPAGVFNVIPASDASGIGKEFCENPIVRKLTFT
GSTNVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIMCKFRNNGQTCVCANRIYVQSGIYDAFAAKLKEK
VEAMKVGDGLEDGTHFGPLISEAAVKKVEDHIADAMDKGAEVILGGAPSELGGTFFEPTIVTGATPDMAFAQDETFGPLA
PLFKFETEDEVIEMANDTIFGLASYFYAKDLSRVYKVAEALEYGIVGINTGIISTELAPFGGVKQSGLGREGSHHGIEDY
LEMKYLCMSV
>Mature_490_residues
MLDATTDLKSLLADPTLLEDRAYINGAFVAGEGTFEVTNPARGDVIANVADVSRMQARDAIAAAQGAQKEWAKWTGKERA
GVLRKWFDLMMAHQEDLAVILTAEMGKPLAEARGEIAYGASFIEFFAEEAKRVYGETIPGHQRDKRITVIKQPIGVAASI
TPWNFPNAMITRKAGPALAAGCAFVARPASETPLSATALAVLAERAGIPAGVFNVIPASDASGIGKEFCENPIVRKLTFT
GSTNVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIMCKFRNNGQTCVCANRIYVQSGIYDAFAAKLKEK
VEAMKVGDGLEDGTHFGPLISEAAVKKVEDHIADAMDKGAEVILGGAPSELGGTFFEPTIVTGATPDMAFAQDETFGPLA
PLFKFETEDEVIEMANDTIFGLASYFYAKDLSRVYKVAEALEYGIVGINTGIISTELAPFGGVKQSGLGREGSHHGIEDY
LEMKYLCMSV

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=474, Percent_Identity=54.6413502109705, Blast_Score=505, Evalue=1e-143,
Organism=Homo sapiens, GI25777721, Length=487, Percent_Identity=52.9774127310062, Blast_Score=494, Evalue=1e-140,
Organism=Homo sapiens, GI238814322, Length=480, Percent_Identity=35.8333333333333, Blast_Score=292, Evalue=6e-79,
Organism=Homo sapiens, GI21614513, Length=478, Percent_Identity=36.1924686192469, Blast_Score=290, Evalue=2e-78,
Organism=Homo sapiens, GI115387104, Length=470, Percent_Identity=34.0425531914894, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI25777730, Length=490, Percent_Identity=35.7142857142857, Blast_Score=282, Evalue=6e-76,
Organism=Homo sapiens, GI21361176, Length=496, Percent_Identity=34.6774193548387, Blast_Score=271, Evalue=1e-72,
Organism=Homo sapiens, GI153266822, Length=463, Percent_Identity=35.6371490280778, Blast_Score=270, Evalue=3e-72,
Organism=Homo sapiens, GI12007648, Length=478, Percent_Identity=31.7991631799163, Blast_Score=268, Evalue=1e-71,
Organism=Homo sapiens, GI25777732, Length=488, Percent_Identity=33.1967213114754, Blast_Score=265, Evalue=5e-71,
Organism=Homo sapiens, GI25777724, Length=498, Percent_Identity=34.5381526104418, Blast_Score=265, Evalue=7e-71,
Organism=Homo sapiens, GI25777728, Length=415, Percent_Identity=35.9036144578313, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI25777726, Length=490, Percent_Identity=31.8367346938775, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI25952152, Length=471, Percent_Identity=28.2377919320594, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI188035924, Length=472, Percent_Identity=28.6016949152542, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI310128093, Length=470, Percent_Identity=28.936170212766, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI310128103, Length=472, Percent_Identity=28.6016949152542, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI11095441, Length=476, Percent_Identity=26.890756302521, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI310128091, Length=470, Percent_Identity=27.8723404255319, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI301500698, Length=270, Percent_Identity=33.7037037037037, Blast_Score=177, Evalue=3e-44,
Organism=Homo sapiens, GI310128089, Length=331, Percent_Identity=29.607250755287, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI223972651, Length=473, Percent_Identity=27.6955602536998, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=34, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI206597441, Length=401, Percent_Identity=27.431421446384, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI206597439, Length=401, Percent_Identity=27.431421446384, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI22907049, Length=401, Percent_Identity=27.431421446384, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI310128095, Length=260, Percent_Identity=32.6923076923077, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI73466520, Length=333, Percent_Identity=26.1261261261261, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI25777736, Length=468, Percent_Identity=26.7094017094017, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI25777734, Length=468, Percent_Identity=26.7094017094017, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI238859541, Length=468, Percent_Identity=26.7094017094017, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI4557303, Length=333, Percent_Identity=26.1261261261261, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI4502043, Length=335, Percent_Identity=26.865671641791, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI238814371, Length=335, Percent_Identity=26.865671641791, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI71773324, Length=335, Percent_Identity=26.865671641791, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI73695881, Length=359, Percent_Identity=27.0194986072423, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI73695879, Length=359, Percent_Identity=27.0194986072423, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI223972653, Length=473, Percent_Identity=24.9471458773784, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI310128087, Length=290, Percent_Identity=26.551724137931, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI310128099, Length=234, Percent_Identity=25.2136752136752, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI310128101, Length=234, Percent_Identity=25.2136752136752, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1789015, Length=481, Percent_Identity=63.4095634095634, Blast_Score=627, Evalue=0.0,
Organism=Escherichia coli, GI1787684, Length=470, Percent_Identity=36.5957446808511, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI1787715, Length=476, Percent_Identity=38.0252100840336, Blast_Score=292, Evalue=3e-80,
Organism=Escherichia coli, GI1786504, Length=478, Percent_Identity=36.8200836820084, Blast_Score=288, Evalue=4e-79,
Organism=Escherichia coli, GI87081896, Length=477, Percent_Identity=33.9622641509434, Blast_Score=278, Evalue=4e-76,
Organism=Escherichia coli, GI1787558, Length=486, Percent_Identity=34.7736625514403, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI87081926, Length=446, Percent_Identity=30.9417040358744, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI87082295, Length=491, Percent_Identity=32.3828920570265, Blast_Score=231, Evalue=7e-62,
Organism=Escherichia coli, GI1788042, Length=473, Percent_Identity=32.76955602537, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1787250, Length=451, Percent_Identity=28.159645232816, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787653, Length=273, Percent_Identity=25.6410256410256, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17534119, Length=466, Percent_Identity=47.6394849785408, Blast_Score=415, Evalue=1e-116,
Organism=Caenorhabditis elegans, GI25144435, Length=475, Percent_Identity=37.6842105263158, Blast_Score=300, Evalue=8e-82,
Organism=Caenorhabditis elegans, GI25143876, Length=485, Percent_Identity=36.701030927835, Blast_Score=295, Evalue=4e-80,
Organism=Caenorhabditis elegans, GI25143874, Length=485, Percent_Identity=36.4948453608247, Blast_Score=294, Evalue=6e-80,
Organism=Caenorhabditis elegans, GI17562198, Length=475, Percent_Identity=37.4736842105263, Blast_Score=292, Evalue=2e-79,
Organism=Caenorhabditis elegans, GI133930964, Length=482, Percent_Identity=36.3070539419087, Blast_Score=282, Evalue=3e-76,
Organism=Caenorhabditis elegans, GI71995606, Length=479, Percent_Identity=35.6993736951983, Blast_Score=274, Evalue=7e-74,
Organism=Caenorhabditis elegans, GI32564736, Length=415, Percent_Identity=37.8313253012048, Blast_Score=270, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI71995613, Length=417, Percent_Identity=35.7314148681055, Blast_Score=241, Evalue=5e-64,
Organism=Caenorhabditis elegans, GI17551164, Length=492, Percent_Identity=30.0813008130081, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI115534176, Length=483, Percent_Identity=29.399585921325, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI71986308, Length=486, Percent_Identity=29.6296296296296, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI25146391, Length=339, Percent_Identity=27.7286135693215, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI32566756, Length=339, Percent_Identity=27.7286135693215, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI25146394, Length=339, Percent_Identity=27.7286135693215, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17564084, Length=412, Percent_Identity=27.1844660194175, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17534447, Length=447, Percent_Identity=26.1744966442953, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI32564151, Length=400, Percent_Identity=26.25, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI115532534, Length=342, Percent_Identity=27.1929824561404, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71990744, Length=285, Percent_Identity=25.6140350877193, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6319478, Length=483, Percent_Identity=50.9316770186335, Blast_Score=488, Evalue=1e-138,
Organism=Saccharomyces cerevisiae, GI6320917, Length=471, Percent_Identity=38.2165605095541, Blast_Score=317, Evalue=2e-87,
Organism=Saccharomyces cerevisiae, GI6324950, Length=471, Percent_Identity=34.6072186836518, Blast_Score=267, Evalue=3e-72,
Organism=Saccharomyces cerevisiae, GI6325196, Length=468, Percent_Identity=34.8290598290598, Blast_Score=263, Evalue=5e-71,
Organism=Saccharomyces cerevisiae, GI6323821, Length=479, Percent_Identity=35.4906054279749, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6323822, Length=479, Percent_Identity=35.0730688935282, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6321828, Length=474, Percent_Identity=26.7932489451477, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6321826, Length=464, Percent_Identity=26.9396551724138, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6323757, Length=332, Percent_Identity=27.4096385542169, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI281362580, Length=478, Percent_Identity=52.3012552301255, Blast_Score=518, Evalue=1e-147,
Organism=Drosophila melanogaster, GI62472918, Length=478, Percent_Identity=52.3012552301255, Blast_Score=518, Evalue=1e-147,
Organism=Drosophila melanogaster, GI62472926, Length=478, Percent_Identity=52.3012552301255, Blast_Score=518, Evalue=1e-147,
Organism=Drosophila melanogaster, GI62472936, Length=478, Percent_Identity=52.3012552301255, Blast_Score=518, Evalue=1e-147,
Organism=Drosophila melanogaster, GI21356737, Length=478, Percent_Identity=52.3012552301255, Blast_Score=518, Evalue=1e-147,
Organism=Drosophila melanogaster, GI24650465, Length=489, Percent_Identity=37.2188139059305, Blast_Score=298, Evalue=5e-81,
Organism=Drosophila melanogaster, GI24585660, Length=479, Percent_Identity=35.4906054279749, Blast_Score=288, Evalue=5e-78,
Organism=Drosophila melanogaster, GI20129399, Length=485, Percent_Identity=34.639175257732, Blast_Score=277, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24666674, Length=456, Percent_Identity=29.1666666666667, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24638878, Length=479, Percent_Identity=27.7661795407098, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24638876, Length=479, Percent_Identity=27.7661795407098, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24668425, Length=441, Percent_Identity=25.1700680272109, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24668417, Length=441, Percent_Identity=25.1700680272109, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24668413, Length=441, Percent_Identity=25.1700680272109, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281360303, Length=462, Percent_Identity=22.2943722943723, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI45552499, Length=343, Percent_Identity=23.9067055393586, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI281360301, Length=462, Percent_Identity=22.0779220779221, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281360299, Length=343, Percent_Identity=23.6151603498542, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281360297, Length=343, Percent_Identity=23.6151603498542, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281360295, Length=343, Percent_Identity=23.6151603498542, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24586250, Length=343, Percent_Identity=23.6151603498542, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28571798, Length=458, Percent_Identity=22.0524017467249, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571796, Length=458, Percent_Identity=22.0524017467249, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571794, Length=458, Percent_Identity=22.0524017467249, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571806, Length=458, Percent_Identity=22.0524017467249, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571802, Length=458, Percent_Identity=22.0524017467249, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28571800, Length=458, Percent_Identity=22.0524017467249, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28574525, Length=450, Percent_Identity=22.2222222222222, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52362; Mature: 52362

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDATTDLKSLLADPTLLEDRAYINGAFVAGEGTFEVTNPARGDVIANVADVSRMQARDA
CCCCHHHHHHHHCCCCEECCCCEECEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHH
IAAAQGAQKEWAKWTGKERAGVLRKWFDLMMAHQEDLAVILTAEMGKPLAEARGEIAYGA
HHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCCHHHH
SFIEFFAEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPNAMITRKAGPALAA
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCEECCCCCHHHH
GCAFVARPASETPLSATALAVLAERAGIPAGVFNVIPASDASGIGKEFCENPIVRKLTFT
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHEECCCCCCCCCHHHHHCCCCEEEEEEC
GSTNVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIMCKFRNNGQTCVCA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEE
NRIYVQSGIYDAFAAKLKEKVEAMKVGDGLEDGTHFGPLISEAAVKKVEDHIADAMDKGA
CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
EVILGGAPSELGGTFFEPTIVTGATPDMAFAQDETFGPLAPLFKFETEDEVIEMANDTIF
EEEECCCCHHHCCCEECCEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCHHH
GLASYFYAKDLSRVYKVAEALEYGIVGINTGIISTELAPFGGVKQSGLGREGSHHGIEDY
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
LEMKYLCMSV
HHHHHHHHCC
>Mature Secondary Structure
MLDATTDLKSLLADPTLLEDRAYINGAFVAGEGTFEVTNPARGDVIANVADVSRMQARDA
CCCCHHHHHHHHCCCCEECCCCEECEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHH
IAAAQGAQKEWAKWTGKERAGVLRKWFDLMMAHQEDLAVILTAEMGKPLAEARGEIAYGA
HHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCCHHHH
SFIEFFAEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPNAMITRKAGPALAA
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCEECCCCCHHHH
GCAFVARPASETPLSATALAVLAERAGIPAGVFNVIPASDASGIGKEFCENPIVRKLTFT
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHEECCCCCCCCCHHHHHCCCCEEEEEEC
GSTNVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIMCKFRNNGQTCVCA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEE
NRIYVQSGIYDAFAAKLKEKVEAMKVGDGLEDGTHFGPLISEAAVKKVEDHIADAMDKGA
CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
EVILGGAPSELGGTFFEPTIVTGATPDMAFAQDETFGPLAPLFKFETEDEVIEMANDTIF
EEEECCCCHHHCCCEECCEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCHHH
GLASYFYAKDLSRVYKVAEALEYGIVGINTGIISTELAPFGGVKQSGLGREGSHHGIEDY
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
LEMKYLCMSV
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]