| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082332
Identifier: 99082332
GI number: 99082332
Start: 2632860
End: 2633645
Strand: Reverse
Name: 99082332
Synonym: TM1040_2492
Alternate gene names: NA
Gene position: 2633645-2632860 (Counterclockwise)
Preceding gene: 99082334
Following gene: 99082331
Centisome position: 82.28
GC content: 59.29
Gene sequence:
>786_bases ATGGAACTCGACGACGCCTATGCCAACGGAGCCTATATCGAAGGAGCCGCAGACTATCCTCCGCGCTGGGCGGCCTCCGC AGAAGATTTCCGCAACAGTCTGCAGGACCGGGCGCGCTTGAACCTTTCTTATGGCGAAGGTGACCGACACAAGTTTGATT TGTTCCTGCCCGAAGGCACCCCCGTGGGGCTGTTTGTCTTTGTGCATGGCGGGTACTGGATGGCATTCGATAAATCGAGC TGGTCGCATCTGGCGGTTGGGGCGCTCTCAAAAGGATGGGCGGTGGCGATGCCGTCATACGAACTTTGCCCCGAGGTGCG CATTTCCGAGATCACGCAGCAGATTTCGCAGGCTGTAACGGCAGCTGCAAAAGAGATCGATGGTCCGATCGTTCTGGCGG GCCACTCCGCCGGGGGGCATCTGGTTGCGCGGATGCTTGACCCCGAAGTGCTGCCGGAGGCCGTTGGGGCACGTATTCGC AACGTTGTGCCGATCTCTCCACTCTCAGATCTGCGTCCATTGCTGCGCACCTCGATGAACGAGAAGTTCAAGATGGACGC CGACGCCGCCATTGCTGAGAGCCCGGTCGAGATGCAAAACCGCTATGACGCCAAAGTGACCGTCTGGGTCGGCGGGGCGG AGCGGCCCGCATTTCTTGATCAGGCGATCTGGCTGGTGGAAGCCTGGGATGCGGATCACGTCATCGCCTTTGAAAAACAC CATTTCAACGTGATCGAACCGCTTGCGGACCCAGAAAGCGATCTGGTTGCGGTGATAACCGCCTGA
Upstream 100 bases:
>100_bases TTCCTCCGCAAATTCGAGTCTCGCAAATCAAAAGCAGTTGGGCCTAATGTTGTCCAGTGACACCGATAAGTCCATAAGCT TAACATATTAAGGGAAAATG
Downstream 100 bases:
>100_bases GGATCTGCCTTGCCCGGAGTATGCTTCGGGCAAGGAAAAAAAGCGCTTGCCGCATGCGGAGATTCCTCGCATCATCCCGC CAGAACCAGCGATGGCGTCG
Product: putative esterase/lipase/thioesterase
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; Lipase/Esterase; N-Acetylanthranilate Amidase; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Lipase; Alpha/Beta Hydrolase; Carboxylesterase Family Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MELDDAYANGAYIEGAADYPPRWAASAEDFRNSLQDRARLNLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSS WSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIR NVVPISPLSDLRPLLRTSMNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDADHVIAFEKH HFNVIEPLADPESDLVAVITA
Sequences:
>Translated_261_residues MELDDAYANGAYIEGAADYPPRWAASAEDFRNSLQDRARLNLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSS WSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIR NVVPISPLSDLRPLLRTSMNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDADHVIAFEKH HFNVIEPLADPESDLVAVITA >Mature_261_residues MELDDAYANGAYIEGAADYPPRWAASAEDFRNSLQDRARLNLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSS WSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIR NVVPISPLSDLRPLLRTSMNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDADHVIAFEKH HFNVIEPLADPESDLVAVITA
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=237, Percent_Identity=27.4261603375527, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI224465228, Length=242, Percent_Identity=26.8595041322314, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI19920830, Length=236, Percent_Identity=30.0847457627119, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28613; Mature: 28613
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDDAYANGAYIEGAADYPPRWAASAEDFRNSLQDRARLNLSYGEGDRHKFDLFLPEGT CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCC PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVT CEEEEEEEECCEEEEECCCCCCEEEEECCCCCEEEECCCHHHCCCCHHHHHHHHHHHHHH AAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMN HHHHHCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC EKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDADHVIAFEKH CCEECCCCHHHHCCCHHHHCCCCCEEEEEECCCCCCHHHHHHEEEEEECCCCCEEEEECC HFNVIEPLADPESDLVAVITA CCEEECCCCCCCCCEEEEEEC >Mature Secondary Structure MELDDAYANGAYIEGAADYPPRWAASAEDFRNSLQDRARLNLSYGEGDRHKFDLFLPEGT CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCC PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVT CEEEEEEEECCEEEEECCCCCCEEEEECCCCCEEEECCCHHHCCCCHHHHHHHHHHHHHH AAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMN HHHHHCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC EKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDADHVIAFEKH CCEECCCCHHHHCCCHHHHCCCCCEEEEEECCCCCCHHHHHHEEEEEECCCCCEEEEECC HFNVIEPLADPESDLVAVITA CCEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA