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The map label for this gene is ypdF [C]

Identifier: 99082331

GI number: 99082331

Start: 2631472

End: 2632680

Strand: Reverse

Name: ypdF [C]

Synonym: TM1040_2491

Alternate gene names: 99082331

Gene position: 2632680-2631472 (Counterclockwise)

Preceding gene: 99082332

Following gene: 99082330

Centisome position: 82.25

GC content: 58.4

Gene sequence:

>1209_bases
ATGACTGCTCGTCCTGAAATGTATCGCTTCCATAACGGTGAAAAAGCGCCGTTGCAGTTCTCTGTCGCGGAATACGAAGA
GCGCATCGCGCGCTTGCGCAGCACCATGTCCGATCTGGGAGTGGAGGCCGCTGTCTTCACCTCCATGCACAATATCTCTT
ATTACTCGGGGTTTACCTATTGCGCCTTCGGGCGACCCTATGGGCTGGTGGTCACGGCGGATCAGGCGGTGACCATCAGT
GCGGGGATCGACGCGGGCCAGCCGTGGCGGCGCTGTTTTTGTGACAACATCACCTACACCGACTGGCAGCGTGACAACTT
CTGGCGGGCTATTCTGTCGGTGGTGGGCGCGCAACGCGTTGTCGGCATCGAAGGTGATCATCTGACGCTGTTGCAACGCG
GCAAGCTCGACCATTTCCTCGCCCCTGCAAAAGTGGTGGACCTCTACGAGGCGACCATGGTGCAGCGCATGCACAAATCA
CCGGCAGAGCTCGAGATGATCCGCGCCGGTGCTGCGGTGGCTGATGTGGGCGGGTTTGCTATTCGCGACGCGGTAAAGGC
CGGTGTGAGAGAAATCGATGTTGCCATGGCCGGGCGGGACGCAATGGAACTGGAGATCGCACGCCGCTTCCCTGATGCGG
AGTATCGCGACACTTGGGTTTGGTTCCAATCTGGCCTGAACACCGATGGAGCGCATAACCCGGTCACCGCACGCCAGCTG
CAGCGTGGAGACATCCTGTCGCTCAATACATTCCCGATGATTTCGGGCTATTACACTGCCCTGGAACGGACGATGTTTGT
GCAGGAGGTCGACCCCGCGAGCCTCAAGATCTGGGAGGCCAATGTCGCGGCGCATGAATATGGCATGTCGCTTCTGAAGC
CCGGCGCGAGCTGCGCGGAGATCACGCATAAGATCAACCGCTTCTTTGAAGAGCGCGACCTGCTGCAATATCGCACGTTT
GGCTACGGGCATTCCTTTGGGGTTTTGTCGCACTACTACGGCCGAGAGGCGGGGCTTGAGCTGCGCGAAGACATCGACAC
TGTGCTGGAGCCGGGCATGGTGATCTCGATGGAGCCCATGCTGACAATTGCTCACGGCGAACCTGGTGCAGGGGGCTATC
GCGAGCATGATATTCTCATCATTACCGAAGACGGCAATGAAAATATCACCAAATATCCCTACGGGCCCGAGTTCAACGTT
GTGGGCTAA

Upstream 100 bases:

>100_bases
CCAGAACCAGCGATGGCGTCGCGCGTGGTTTGGCCACGGGTTCAACATCTCAAAAAACATCCTGTACGCCGGGATCTTCT
TGTCAAAAGGAGGGTCCAGC

Downstream 100 bases:

>100_bases
TCCCTGATAAAACCCTTGACCGGCGCGCGCGGGACTTGCATCCAACGCGGGCCGGTGCTGAGCCCTGATCTCGGGCTCAG
TCGCCGCAAAATTTCGCCTT

Product: creatinase

Products: NA

Alternate protein names: Creatine amidinohydrolase [H]

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTARPEMYRFHNGEKAPLQFSVAEYEERIARLRSTMSDLGVEAAVFTSMHNISYYSGFTYCAFGRPYGLVVTADQAVTIS
AGIDAGQPWRRCFCDNITYTDWQRDNFWRAILSVVGAQRVVGIEGDHLTLLQRGKLDHFLAPAKVVDLYEATMVQRMHKS
PAELEMIRAGAAVADVGGFAIRDAVKAGVREIDVAMAGRDAMELEIARRFPDAEYRDTWVWFQSGLNTDGAHNPVTARQL
QRGDILSLNTFPMISGYYTALERTMFVQEVDPASLKIWEANVAAHEYGMSLLKPGASCAEITHKINRFFEERDLLQYRTF
GYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVISMEPMLTIAHGEPGAGGYREHDILIITEDGNENITKYPYGPEFNV
VG

Sequences:

>Translated_402_residues
MTARPEMYRFHNGEKAPLQFSVAEYEERIARLRSTMSDLGVEAAVFTSMHNISYYSGFTYCAFGRPYGLVVTADQAVTIS
AGIDAGQPWRRCFCDNITYTDWQRDNFWRAILSVVGAQRVVGIEGDHLTLLQRGKLDHFLAPAKVVDLYEATMVQRMHKS
PAELEMIRAGAAVADVGGFAIRDAVKAGVREIDVAMAGRDAMELEIARRFPDAEYRDTWVWFQSGLNTDGAHNPVTARQL
QRGDILSLNTFPMISGYYTALERTMFVQEVDPASLKIWEANVAAHEYGMSLLKPGASCAEITHKINRFFEERDLLQYRTF
GYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVISMEPMLTIAHGEPGAGGYREHDILIITEDGNENITKYPYGPEFNV
VG
>Mature_401_residues
TARPEMYRFHNGEKAPLQFSVAEYEERIARLRSTMSDLGVEAAVFTSMHNISYYSGFTYCAFGRPYGLVVTADQAVTISA
GIDAGQPWRRCFCDNITYTDWQRDNFWRAILSVVGAQRVVGIEGDHLTLLQRGKLDHFLAPAKVVDLYEATMVQRMHKSP
AELEMIRAGAAVADVGGFAIRDAVKAGVREIDVAMAGRDAMELEIARRFPDAEYRDTWVWFQSGLNTDGAHNPVTARQLQ
RGDILSLNTFPMISGYYTALERTMFVQEVDPASLKIWEANVAAHEYGMSLLKPGASCAEITHKINRFFEERDLLQYRTFG
YGHSFGVLSHYYGREAGLELREDIDTVLEPGMVISMEPMLTIAHGEPGAGGYREHDILIITEDGNENITKYPYGPEFNVV
G

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24 family. Creatinase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788728, Length=251, Percent_Identity=27.8884462151394, Blast_Score=86, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24583427, Length=181, Percent_Identity=27.6243093922652, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000587
- InterPro:   IPR000994 [H]

Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]

EC number: =3.5.3.3 [H]

Molecular weight: Translated: 45068; Mature: 44936

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARPEMYRFHNGEKAPLQFSVAEYEERIARLRSTMSDLGVEAAVFTSMHNISYYSGFTY
CCCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCEE
CAFGRPYGLVVTADQAVTISAGIDAGQPWRRCFCDNITYTDWQRDNFWRAILSVVGAQRV
EECCCCEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHE
VGIEGDHLTLLQRGKLDHFLAPAKVVDLYEATMVQRMHKSPAELEMIRAGAAVADVGGFA
EECCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCHH
IRDAVKAGVREIDVAMAGRDAMELEIARRFPDAEYRDTWVWFQSGLNTDGAHNPVTARQL
HHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
QRGDILSLNTFPMISGYYTALERTMFVQEVDPASLKIWEANVAAHEYGMSLLKPGASCAE
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCHHHHCCCCHHHH
ITHKINRFFEERDLLQYRTFGYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVISMEPM
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCE
LTIAHGEPGAGGYREHDILIITEDGNENITKYPYGPEFNVVG
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TARPEMYRFHNGEKAPLQFSVAEYEERIARLRSTMSDLGVEAAVFTSMHNISYYSGFTY
CCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCEE
CAFGRPYGLVVTADQAVTISAGIDAGQPWRRCFCDNITYTDWQRDNFWRAILSVVGAQRV
EECCCCEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHE
VGIEGDHLTLLQRGKLDHFLAPAKVVDLYEATMVQRMHKSPAELEMIRAGAAVADVGGFA
EECCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCHH
IRDAVKAGVREIDVAMAGRDAMELEIARRFPDAEYRDTWVWFQSGLNTDGAHNPVTARQL
HHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
QRGDILSLNTFPMISGYYTALERTMFVQEVDPASLKIWEANVAAHEYGMSLLKPGASCAE
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCHHHHCCCCHHHH
ITHKINRFFEERDLLQYRTFGYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVISMEPM
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCE
LTIAHGEPGAGGYREHDILIITEDGNENITKYPYGPEFNVVG
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368564 [H]