| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082302
Identifier: 99082302
GI number: 99082302
Start: 2604162
End: 2604518
Strand: Direct
Name: 99082302
Synonym: TM1040_2462
Alternate gene names: NA
Gene position: 2604162-2604518 (Clockwise)
Preceding gene: 99082301
Following gene: 99082303
Centisome position: 81.36
GC content: 60.5
Gene sequence:
>357_bases GTGATTGCAGTCATATTCGAAGTTACCCCCGCAGACGGCATGACCGACGCCTACCTCGATCATGCAGCAACGCTGCGGCC CCTGTTTGAGGATATGGAGGGCTTTATCTCAGTGGAGAGATTTCAGAGCCTCACGACGCCCGGCAAACTCTTGTCGCTGT CCTTCTGGGAAGATGAAGCGGCGCTGGCGCGCTGGCGCAAGATGGAGAAGCACCGGGCCGCGCAGGCAAAAGGACGGAGC GGCTATTTTGCGGACTACCGGTTGCGCGTGGCAGGTGTGATCCGGGACTACGGCATGATGGAGCGTGAGCAGGCTCCAGA GGACAGCCGCGCCCTGCATGATCGACCCGGGACATAA
Upstream 100 bases:
>100_bases AGAACTACGCATTTGCGCAAAAGGAAAAGTTCATTTTGCGCGAGGACCGCACATGGCTCACACTGGCGTCCAATCCCCAC GGCAGCGCAGGAGACAGAGC
Downstream 100 bases:
>100_bases AAACGGACAACTGACCGTCGGTCAGGAATGCATCACAGATCCATCAAACTCCCGTTCGGGGCCGCACCACGCTGCGGTCG CTGCCCTTATGGCGCCGACG
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Monooxygenase; Antibiotic Biosynthesis Monooxygenase Domain Protein; Extracellular Polysaccharide Biosynthesis Protein; Antibiotic Biosynthesis Monooxygenase Family
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MIAVIFEVTPADGMTDAYLDHAATLRPLFEDMEGFISVERFQSLTTPGKLLSLSFWEDEAALARWRKMEKHRAAQAKGRS GYFADYRLRVAGVIRDYGMMEREQAPEDSRALHDRPGT
Sequences:
>Translated_118_residues MIAVIFEVTPADGMTDAYLDHAATLRPLFEDMEGFISVERFQSLTTPGKLLSLSFWEDEAALARWRKMEKHRAAQAKGRS GYFADYRLRVAGVIRDYGMMEREQAPEDSRALHDRPGT >Mature_118_residues MIAVIFEVTPADGMTDAYLDHAATLRPLFEDMEGFISVERFQSLTTPGKLLSLSFWEDEAALARWRKMEKHRAAQAKGRS GYFADYRLRVAGVIRDYGMMEREQAPEDSRALHDRPGT
Specific function: Unknown
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13440; Mature: 13440
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVIFEVTPADGMTDAYLDHAATLRPLFEDMEGFISVERFQSLTTPGKLLSLSFWEDEA CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH ALARWRKMEKHRAAQAKGRSGYFADYRLRVAGVIRDYGMMEREQAPEDSRALHDRPGT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCHHHCCCCCCC >Mature Secondary Structure MIAVIFEVTPADGMTDAYLDHAATLRPLFEDMEGFISVERFQSLTTPGKLLSLSFWEDEA CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH ALARWRKMEKHRAAQAKGRSGYFADYRLRVAGVIRDYGMMEREQAPEDSRALHDRPGT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA