| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yeaS [C]
Identifier: 99082303
GI number: 99082303
Start: 2604785
End: 2605372
Strand: Direct
Name: yeaS [C]
Synonym: TM1040_2463
Alternate gene names: 99082303
Gene position: 2604785-2605372 (Clockwise)
Preceding gene: 99082302
Following gene: 99082308
Centisome position: 81.38
GC content: 56.29
Gene sequence:
>588_bases TTGATCCTGCCCCTTATGATTTTTCTGGCTCCGCTCGCCTATAGTCCGGGACCGGGCAATCTCTTTTTCGCCGCAGCTGC CGCCAGACTAGGGCTGCGTGCGACCCTGTTGGCCCTGGCCGGATATCACATTGCCACCCTCATCATCACCCTTGCGATCG GGATGGGCGGATTTGCTGCTCTCGCGCAACGGCCCATGGCCTTCGAGATCATCAAGACCACGGGCGCAGCCTATGTCCTC TGGCTGGCTTGGCGGTTTTTTCGCGCCACTCCGATAGAGGGGGACCAACCGCAATCAACTGTCCGCTTCTCCGACGGGGT TTGGCTGTTGCTGCTCAACCCCAAGGCTTATGTGATCATCTCGTTGATGTTCTCGCAGTTCCTCTCGCTTGATGCTGGAC ACAGATGGCACGAGATCTGGATCATCAGTCTGGTGTTTACGTTGAACAATCTTCTTGCATTCACAGTTTGGATTCTTGCG GGGACGCAACTGCGGCGCGTCTTTTGCCATTCTGTGCAAGCGCGAGGGATCAACACCGCCTTTGCATGCCTCTTGGTCGG GATCGCAATATGGATGCTTTTCGGATGA
Upstream 100 bases:
>100_bases CAGCGGGCACGCCTAGAATGCGCAAGCTTCGGGTCGGCATGGGATCAGACACTGTGGCAGAGGAGACAGATCCCATCTGT CTCTCGTCGGAGAACTAAGC
Downstream 100 bases:
>100_bases TGTGTGCTCAGGGGCGCACCAGAACCGCCTCGACGCGGCGGTTGATTTCGCGCCCCTCCTCGGAAGTGTTGGGCGCCAAG GGAGCCATATATCCGGCCCC
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: Lysine Exporter Protein LysE/YggA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MILPLMIFLAPLAYSPGPGNLFFAAAAARLGLRATLLALAGYHIATLIITLAIGMGGFAALAQRPMAFEIIKTTGAAYVL WLAWRFFRATPIEGDQPQSTVRFSDGVWLLLLNPKAYVIISLMFSQFLSLDAGHRWHEIWIISLVFTLNNLLAFTVWILA GTQLRRVFCHSVQARGINTAFACLLVGIAIWMLFG
Sequences:
>Translated_195_residues MILPLMIFLAPLAYSPGPGNLFFAAAAARLGLRATLLALAGYHIATLIITLAIGMGGFAALAQRPMAFEIIKTTGAAYVL WLAWRFFRATPIEGDQPQSTVRFSDGVWLLLLNPKAYVIISLMFSQFLSLDAGHRWHEIWIISLVFTLNNLLAFTVWILA GTQLRRVFCHSVQARGINTAFACLLVGIAIWMLFG >Mature_195_residues MILPLMIFLAPLAYSPGPGNLFFAAAAARLGLRATLLALAGYHIATLIITLAIGMGGFAALAQRPMAFEIIKTTGAAYVL WLAWRFFRATPIEGDQPQSTVRFSDGVWLLLLNPKAYVIISLMFSQFLSLDAGHRWHEIWIISLVFTLNNLLAFTVWILA GTQLRRVFCHSVQARGINTAFACLLVGIAIWMLFG
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21483; Mature: 21483
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILPLMIFLAPLAYSPGPGNLFFAAAAARLGLRATLLALAGYHIATLIITLAIGMGGFAA CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LAQRPMAFEIIKTTGAAYVLWLAWRFFRATPIEGDQPQSTVRFSDGVWLLLLNPKAYVII HHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCHHHHH SLMFSQFLSLDAGHRWHEIWIISLVFTLNNLLAFTVWILAGTQLRRVFCHSVQARGINTA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FACLLVGIAIWMLFG HHHHHHHHHHHHHCC >Mature Secondary Structure MILPLMIFLAPLAYSPGPGNLFFAAAAARLGLRATLLALAGYHIATLIITLAIGMGGFAA CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LAQRPMAFEIIKTTGAAYVLWLAWRFFRATPIEGDQPQSTVRFSDGVWLLLLNPKAYVII HHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCHHHHH SLMFSQFLSLDAGHRWHEIWIISLVFTLNNLLAFTVWILAGTQLRRVFCHSVQARGINTA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FACLLVGIAIWMLFG HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA