Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is mdxG [H]

Identifier: 99082260

GI number: 99082260

Start: 2561445

End: 2562242

Strand: Direct

Name: mdxG [H]

Synonym: TM1040_2420

Alternate gene names: 99082260

Gene position: 2561445-2562242 (Clockwise)

Preceding gene: 99082259

Following gene: 99082261

Centisome position: 80.02

GC content: 57.64

Gene sequence:

>798_bases
ATGCAAAAACGATCCATCGTCCCCATCGTCTATATTCTCTTCCTCATGCTGCCGATCTATTGGCTCGTGGCGATGAGCTT
TAAGACCACAAATGAGATCCTCTCCGGTTTCTCGCTCTTCCCGCAGACCTTTACGCTCGAAAACTACAAGGTGATCTTCA
CCGACCCGAGCTGGTACTGGGGCTACATAAACTCGATCCTTTACGTGTCGATCAACACGGTGATTTCCGTCGCGGTGGCG
CTGCCTGCGGCCTATGCCTTCTCGCGCTATCGGTTCTTGGGCGACAAGCAGCTGTTCTTCTGGCTCTTGACCAACCGGAT
GGCCCCGGCCGCCGTTTTCGCCCTGCCCTTCTTTCAGCTCTATTCGGCTGTGGGGCTCTTTGACACGCATCTGGCTGTGG
CACTGGCGCATTGCCTCTTTAACATTCCGCTGGCGGTCTGGATCCTCGAGGGCTTCATGGGTGGCGTGCCGAAAGAGCTG
GATGAGACGGCCTATGTGGACGGCTATTCCTTCCCGCGCTTCTTCGTGTCGATCTTCTTGCCCGCCATCAAGGCTGGCGT
GGGCGTGGCGGCGTTCTTCTGCTTCATGTTCTCCTGGGTGGAGCTCTTGCTGGCAAAGACCCTGACGGCCGTGGCTGCAA
AGCCCATCGCGGCCACCATGACAAAGACCGCATCCTCTGCGGGCTATGAGCTGGGGCTTTTGGCAGCCGCAGGCACCTTG
ACCATCATTCCGGGCGCCATCGTGATCTATTTCGTCCGCAACTACATCGCGAAGGGCTTCGCGATGGGGAGAGTTTGA

Upstream 100 bases:

>100_bases
CCGCCGCGATGTCGCTCATCTACTTTGCAATCACGCTTCTGGTCAGCTGGCTGTTCTACACGCTGATGACCAAAGACGAC
CAGAACTAAGGGAGGGTATG

Downstream 100 bases:

>100_bases
TATGTTGAGCTGGATGGCCTGGACCTGGCCCACCGCCCTTGTCTTCATCGGGATCTTCTCTGCCATTGGCGTTCTGATCC
TCTTGGAAATCCGCAACCCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYWGYINSILYVSINTVISVAVA
LPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQLYSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKEL
DETAYVDGYSFPRFFVSIFLPAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL
TIIPGAIVIYFVRNYIAKGFAMGRV

Sequences:

>Translated_265_residues
MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYWGYINSILYVSINTVISVAVA
LPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQLYSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKEL
DETAYVDGYSFPRFFVSIFLPAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL
TIIPGAIVIYFVRNYIAKGFAMGRV
>Mature_265_residues
MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYWGYINSILYVSINTVISVAVA
LPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQLYSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKEL
DETAYVDGYSFPRFFVSIFLPAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL
TIIPGAIVIYFVRNYIAKGFAMGRV

Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=261, Percent_Identity=26.4367816091954, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1790464, Length=278, Percent_Identity=25.8992805755396, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29410; Mature: 29410

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHH
GYINSILYVSINTVISVAVALPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
YSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKELDETAYVDGYSFPRFFVSIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHCCCCCCHHHHHHHHHH
PAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHCCHH
TIIPGAIVIYFVRNYIAKGFAMGRV
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHH
GYINSILYVSINTVISVAVALPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
YSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKELDETAYVDGYSFPRFFVSIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHCCCCCCHHHHHHHHHH
PAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHCCHH
TIIPGAIVIYFVRNYIAKGFAMGRV
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]