| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is mdxG [H]
Identifier: 99082260
GI number: 99082260
Start: 2561445
End: 2562242
Strand: Direct
Name: mdxG [H]
Synonym: TM1040_2420
Alternate gene names: 99082260
Gene position: 2561445-2562242 (Clockwise)
Preceding gene: 99082259
Following gene: 99082261
Centisome position: 80.02
GC content: 57.64
Gene sequence:
>798_bases ATGCAAAAACGATCCATCGTCCCCATCGTCTATATTCTCTTCCTCATGCTGCCGATCTATTGGCTCGTGGCGATGAGCTT TAAGACCACAAATGAGATCCTCTCCGGTTTCTCGCTCTTCCCGCAGACCTTTACGCTCGAAAACTACAAGGTGATCTTCA CCGACCCGAGCTGGTACTGGGGCTACATAAACTCGATCCTTTACGTGTCGATCAACACGGTGATTTCCGTCGCGGTGGCG CTGCCTGCGGCCTATGCCTTCTCGCGCTATCGGTTCTTGGGCGACAAGCAGCTGTTCTTCTGGCTCTTGACCAACCGGAT GGCCCCGGCCGCCGTTTTCGCCCTGCCCTTCTTTCAGCTCTATTCGGCTGTGGGGCTCTTTGACACGCATCTGGCTGTGG CACTGGCGCATTGCCTCTTTAACATTCCGCTGGCGGTCTGGATCCTCGAGGGCTTCATGGGTGGCGTGCCGAAAGAGCTG GATGAGACGGCCTATGTGGACGGCTATTCCTTCCCGCGCTTCTTCGTGTCGATCTTCTTGCCCGCCATCAAGGCTGGCGT GGGCGTGGCGGCGTTCTTCTGCTTCATGTTCTCCTGGGTGGAGCTCTTGCTGGCAAAGACCCTGACGGCCGTGGCTGCAA AGCCCATCGCGGCCACCATGACAAAGACCGCATCCTCTGCGGGCTATGAGCTGGGGCTTTTGGCAGCCGCAGGCACCTTG ACCATCATTCCGGGCGCCATCGTGATCTATTTCGTCCGCAACTACATCGCGAAGGGCTTCGCGATGGGGAGAGTTTGA
Upstream 100 bases:
>100_bases CCGCCGCGATGTCGCTCATCTACTTTGCAATCACGCTTCTGGTCAGCTGGCTGTTCTACACGCTGATGACCAAAGACGAC CAGAACTAAGGGAGGGTATG
Downstream 100 bases:
>100_bases TATGTTGAGCTGGATGGCCTGGACCTGGCCCACCGCCCTTGTCTTCATCGGGATCTTCTCTGCCATTGGCGTTCTGATCC TCTTGGAAATCCGCAACCCC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYWGYINSILYVSINTVISVAVA LPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQLYSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKEL DETAYVDGYSFPRFFVSIFLPAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL TIIPGAIVIYFVRNYIAKGFAMGRV
Sequences:
>Translated_265_residues MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYWGYINSILYVSINTVISVAVA LPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQLYSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKEL DETAYVDGYSFPRFFVSIFLPAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL TIIPGAIVIYFVRNYIAKGFAMGRV >Mature_265_residues MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYWGYINSILYVSINTVISVAVA LPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQLYSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKEL DETAYVDGYSFPRFFVSIFLPAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL TIIPGAIVIYFVRNYIAKGFAMGRV
Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=261, Percent_Identity=26.4367816091954, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1790464, Length=278, Percent_Identity=25.8992805755396, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29410; Mature: 29410
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHH GYINSILYVSINTVISVAVALPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH YSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKELDETAYVDGYSFPRFFVSIFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHCCCCCCHHHHHHHHHH PAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHCCHH TIIPGAIVIYFVRNYIAKGFAMGRV HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTFTLENYKVIFTDPSWYW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHH GYINSILYVSINTVISVAVALPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH YSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKELDETAYVDGYSFPRFFVSIFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHCCCCCCHHHHHHHHHH PAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAATMTKTASSAGYELGLLAAAGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHCCHH TIIPGAIVIYFVRNYIAKGFAMGRV HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]