Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082261

Identifier: 99082261

GI number: 99082261

Start: 2562244

End: 2562522

Strand: Direct

Name: 99082261

Synonym: TM1040_2421

Alternate gene names: NA

Gene position: 2562244-2562522 (Clockwise)

Preceding gene: 99082260

Following gene: 99082262

Centisome position: 80.05

GC content: 60.57

Gene sequence:

>279_bases
ATGTTGAGCTGGATGGCCTGGACCTGGCCCACCGCCCTTGTCTTCATCGGGATCTTCTCTGCCATTGGCGTTCTGATCCT
CTTGGAAATCCGCAACCCCGGCGGGGATGCCCGCAAAGGTGTGCTTGGCCTCACCACAACACGCGGTGACCGGCTGTTCA
TCAGCCTCCTTGGCACCTCCTACATCTTCCTGGCCTGGCTGGGCCTGATGGGGATGCCGCTCTGGACACCGCTAGGGCTC
GCGATTGCATGGGGCATCTTCTGTTTCTGGAAGGTGTGA

Upstream 100 bases:

>100_bases
TTGGCAGCCGCAGGCACCTTGACCATCATTCCGGGCGCCATCGTGATCTATTTCGTCCGCAACTACATCGCGAAGGGCTT
CGCGATGGGGAGAGTTTGAT

Downstream 100 bases:

>100_bases
CCGCCCGCACGGCAAAGTCAAAACCGGTCCTGAGGGCACGTCTGCCCCTCAGGACCACCCCAGCCCCAACAAAAGCCCCC
TGCGCCATAACCGGACATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLSWMAWTWPTALVFIGIFSAIGVLILLEIRNPGGDARKGVLGLTTTRGDRLFISLLGTSYIFLAWLGLMGMPLWTPLGL
AIAWGIFCFWKV

Sequences:

>Translated_92_residues
MLSWMAWTWPTALVFIGIFSAIGVLILLEIRNPGGDARKGVLGLTTTRGDRLFISLLGTSYIFLAWLGLMGMPLWTPLGL
AIAWGIFCFWKV
>Mature_92_residues
MLSWMAWTWPTALVFIGIFSAIGVLILLEIRNPGGDARKGVLGLTTTRGDRLFISLLGTSYIFLAWLGLMGMPLWTPLGL
AIAWGIFCFWKV

Specific function: Unknown

COG id: COG5477

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10202; Mature: 10202

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSWMAWTWPTALVFIGIFSAIGVLILLEIRNPGGDARKGVLGLTTTRGDRLFISLLGTS
CCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHH
YIFLAWLGLMGMPLWTPLGLAIAWGIFCFWKV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSWMAWTWPTALVFIGIFSAIGVLILLEIRNPGGDARKGVLGLTTTRGDRLFISLLGTS
CCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHH
YIFLAWLGLMGMPLWTPLGLAIAWGIFCFWKV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA