Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082244

Identifier: 99082244

GI number: 99082244

Start: 2540971

End: 2541936

Strand: Direct

Name: 99082244

Synonym: TM1040_2404

Alternate gene names: NA

Gene position: 2540971-2541936 (Clockwise)

Preceding gene: 99082243

Following gene: 99082245

Centisome position: 79.38

GC content: 62.22

Gene sequence:

>966_bases
ATGATGAATCGCCTGCGCCATCTGCCGCGCCGCGCTTTGCTGCTGATCTGCGCCGCCCTACCGGTTGGCGCGCTCACGCT
TTGGTCTCTGGGATCGCGCGGCTCCAGCCCAGTCGAGGTCCCACCACTTCCAGCCCCGCAGGCCCCATTGACGGTGTATC
ACCTCGGACACTCACTGGTGGGCGCGGATATTCCGCATTTCCTGGCGCAGTTTGCAGGCTCCGGCCACGCCTACAATGTC
CAGCGCGGCTCAGGTACAGCGCTGAGAGCGCATTGGGAAGAAAGCGAGCCGATCCTCGACTTTGACAAGGTCAACGCCGC
TCCGATCTGGCGGGACCCCAAAGAGGCGCTCTCCACGACGGACTATGATGCTGTGATCTTCACCGAAATGGTGGAGCTGC
GCGATGCGATCAAGTATTTCGACGGTGCACGCTATCTCAATCGGTGGGCCGATCTGGCACGCAAAGGCAACCCGAACGCC
CGGCTCTATCTGTATGAGACATGGCACCGGCTCGACGATGCCGAAGGGTGGCTCAATCGTATTGACGCCGATCTGGAGGC
GCTGTGGTTGGATGAACTCGCTGCCCGCGATGACCGCGCGGCCTCGGACCAGCCCTTGTATCTCATCCCCGGAGGCCAGG
TGCTTGCCGCCGTTACACGCGCAGCCGAAGCCGGGGAGATCAACGGCTTCTCAGACCGCGAGGCGCTGTTTGATCTGCTG
CCGGACGGCACGCGCGACCAGATCCATCTTAGCCCGCTTGGCGCCTATATCGTCGCGCTTACGCATTATGCGGTGCTTTA
TCATCGCACTCCTGAGGGCCTGCCCCACAGGGTAGCCCTTGCCGATGGTACGGAATTCAAAGCACTCGACGCAGAAACCG
CCCGCCAGTTGCAATCCATCGTATGGCGCACCGTCACCCACCTGCCCCGCACCGGCGTAGCAAGTGCCAAATCGGAGGCA
TCATGA

Upstream 100 bases:

>100_bases
AATTGCCTTACCGCAGCGGAGATCTCCTCCGGGGTCGATTTGCGATCACCACTGGGGTAATCATCACCGCGGTTGAAATC
TCAAAGAATGAGCTGTGCCC

Downstream 100 bases:

>100_bases
GCACGGAGGCCCTCATCACTGCCGTGATGATGATTGGGCATTCTCTGATCGGTCCTGAAAATCCGCGCATGCTGCAACAG
CTTCTTCAGGCCGGGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MMNRLRHLPRRALLLICAALPVGALTLWSLGSRGSSPVEVPPLPAPQAPLTVYHLGHSLVGADIPHFLAQFAGSGHAYNV
QRGSGTALRAHWEESEPILDFDKVNAAPIWRDPKEALSTTDYDAVIFTEMVELRDAIKYFDGARYLNRWADLARKGNPNA
RLYLYETWHRLDDAEGWLNRIDADLEALWLDELAARDDRAASDQPLYLIPGGQVLAAVTRAAEAGEINGFSDREALFDLL
PDGTRDQIHLSPLGAYIVALTHYAVLYHRTPEGLPHRVALADGTEFKALDAETARQLQSIVWRTVTHLPRTGVASAKSEA
S

Sequences:

>Translated_321_residues
MMNRLRHLPRRALLLICAALPVGALTLWSLGSRGSSPVEVPPLPAPQAPLTVYHLGHSLVGADIPHFLAQFAGSGHAYNV
QRGSGTALRAHWEESEPILDFDKVNAAPIWRDPKEALSTTDYDAVIFTEMVELRDAIKYFDGARYLNRWADLARKGNPNA
RLYLYETWHRLDDAEGWLNRIDADLEALWLDELAARDDRAASDQPLYLIPGGQVLAAVTRAAEAGEINGFSDREALFDLL
PDGTRDQIHLSPLGAYIVALTHYAVLYHRTPEGLPHRVALADGTEFKALDAETARQLQSIVWRTVTHLPRTGVASAKSEA
S
>Mature_321_residues
MMNRLRHLPRRALLLICAALPVGALTLWSLGSRGSSPVEVPPLPAPQAPLTVYHLGHSLVGADIPHFLAQFAGSGHAYNV
QRGSGTALRAHWEESEPILDFDKVNAAPIWRDPKEALSTTDYDAVIFTEMVELRDAIKYFDGARYLNRWADLARKGNPNA
RLYLYETWHRLDDAEGWLNRIDADLEALWLDELAARDDRAASDQPLYLIPGGQVLAAVTRAAEAGEINGFSDREALFDLL
PDGTRDQIHLSPLGAYIVALTHYAVLYHRTPEGLPHRVALADGTEFKALDAETARQLQSIVWRTVTHLPRTGVASAKSEA
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35464; Mature: 35464

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRLRHLPRRALLLICAALPVGALTLWSLGSRGSSPVEVPPLPAPQAPLTVYHLGHSLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH
GADIPHFLAQFAGSGHAYNVQRGSGTALRAHWEESEPILDFDKVNAAPIWRDPKEALSTT
HCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCHHCCCCCCCCCCHHHHHCCC
DYDAVIFTEMVELRDAIKYFDGARYLNRWADLARKGNPNARLYLYETWHRLDDAEGWLNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHH
IDADLEALWLDELAARDDRAASDQPLYLIPGGQVLAAVTRAAEAGEINGFSDREALFDLL
HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHC
PDGTRDQIHLSPLGAYIVALTHYAVLYHRTPEGLPHRVALADGTEFKALDAETARQLQSI
CCCCCCEEEECHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCEECCHHHHHHHHHH
VWRTVTHLPRTGVASAKSEAS
HHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNRLRHLPRRALLLICAALPVGALTLWSLGSRGSSPVEVPPLPAPQAPLTVYHLGHSLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH
GADIPHFLAQFAGSGHAYNVQRGSGTALRAHWEESEPILDFDKVNAAPIWRDPKEALSTT
HCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCHHCCCCCCCCCCHHHHHCCC
DYDAVIFTEMVELRDAIKYFDGARYLNRWADLARKGNPNARLYLYETWHRLDDAEGWLNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHH
IDADLEALWLDELAARDDRAASDQPLYLIPGGQVLAAVTRAAEAGEINGFSDREALFDLL
HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHC
PDGTRDQIHLSPLGAYIVALTHYAVLYHRTPEGLPHRVALADGTEFKALDAETARQLQSI
CCCCCCEEEECHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCEECCHHHHHHHHHH
VWRTVTHLPRTGVASAKSEAS
HHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA