| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is entD [H]
Identifier: 99082243
GI number: 99082243
Start: 2540264
End: 2540974
Strand: Direct
Name: entD [H]
Synonym: TM1040_2403
Alternate gene names: 99082243
Gene position: 2540264-2540974 (Clockwise)
Preceding gene: 99082242
Following gene: 99082244
Centisome position: 79.36
GC content: 60.9
Gene sequence:
>711_bases ATGATTGCACCCCGACCCGCGCCACAGGATATCTCGCAGCAGCGCCAGCACGCGCTGCGCCAACTCTTGTCAGATCCGAT CGCAATCGCCACCTGCGACCCACATGGTGACCTCCCGGAACCCTTTGCCGAAGAAAGCGCCTGCTTGTCGCCCAATGCCG TGGAAAAGCGGCGGCGCGAATTTGCCGCCGGGCGCGCCTCGGCGCATCAGGCGATGCGCGCGTTGGACCAACCCTGTGCG CCGATCCTTATCGGGCCGAAACGCGCGCCTCTTTGGCCAGAGGGTCTGACCGGCAGCATCACGCATTGTGCCTCCTGCGC CATGGCGGCGGTTGGGTTTACACGCGACTTTACCGGCATCGGCGTCGATGTCGAAGAGGACACCCCTCTGTCGCGCGACC TGTGGGACAGCATCGCAAGCCCCGCCGAACAGACCTGGATCGCTGCACAGCCTGACCCCGGCCAAGCTGGCAAACTGCTG TTTTCTGCGAAAGAAGCCGCCTACAAGGCTCAGTATTCCCGTTCAGAGCGCTTTTTCGGCTTCAGTGGGCTCGAACTTGT CTTTGACACAAACAAAGGGCAGTTCACGGCCTGTTTCACCTCGGATCAATTGCCTTACCGCAGCGGAGATCTCCTCCGGG GTCGATTTGCGATCACCACTGGGGTAATCATCACCGCGGTTGAAATCTCAAAGAATGAGCTGTGCCCATGA
Upstream 100 bases:
>100_bases ACACCACGGTTGCGGAGACGTCCCCTGCCGCCCCGGCAGGGCGTGCAGACACCATGTCCAAACGCCGCGCAATGCGCGCC AATCGCAAAGCCCGCTCTGG
Downstream 100 bases:
>100_bases TGAATCGCCTGCGCCATCTGCCGCGCCGCGCTTTGCTGCTGATCTGCGCCGCCCTACCGGTTGGCGCGCTCACGCTTTGG TCTCTGGGATCGCGCGGCTC
Product: 4'-phosphopantetheinyl transferase
Products: pyrophosphate; AMP; enterobactin; aryl carrier protein/isochorismatase; 3',5'-ADP; serine activating enzyme + [C]
Alternate protein names: Enterobactin synthase component D; Enterochelin synthase D [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MIAPRPAPQDISQQRQHALRQLLSDPIAIATCDPHGDLPEPFAEESACLSPNAVEKRRREFAAGRASAHQAMRALDQPCA PILIGPKRAPLWPEGLTGSITHCASCAMAAVGFTRDFTGIGVDVEEDTPLSRDLWDSIASPAEQTWIAAQPDPGQAGKLL FSAKEAAYKAQYSRSERFFGFSGLELVFDTNKGQFTACFTSDQLPYRSGDLLRGRFAITTGVIITAVEISKNELCP
Sequences:
>Translated_236_residues MIAPRPAPQDISQQRQHALRQLLSDPIAIATCDPHGDLPEPFAEESACLSPNAVEKRRREFAAGRASAHQAMRALDQPCA PILIGPKRAPLWPEGLTGSITHCASCAMAAVGFTRDFTGIGVDVEEDTPLSRDLWDSIASPAEQTWIAAQPDPGQAGKLL FSAKEAAYKAQYSRSERFFGFSGLELVFDTNKGQFTACFTSDQLPYRSGDLLRGRFAITTGVIITAVEISKNELCP >Mature_236_residues MIAPRPAPQDISQQRQHALRQLLSDPIAIATCDPHGDLPEPFAEESACLSPNAVEKRRREFAAGRASAHQAMRALDQPCA PILIGPKRAPLWPEGLTGSITHCASCAMAAVGFTRDFTGIGVDVEEDTPLSRDLWDSIASPAEQTWIAAQPDPGQAGKLL FSAKEAAYKAQYSRSERFFGFSGLELVFDTNKGQFTACFTSDQLPYRSGDLLRGRFAITTGVIITAVEISKNELCP
Specific function: Catalyzes the transfer of the 4'-phosphopantetheine moiety from coenzyme A to apo-domains of both entB (an ArCP domain) and entF (a PCP domain). Plays an essential role in the assembly of the enterobactin [H]
COG id: COG2977
COG function: function code Q; Phosphopantetheinyl transferase component of siderophore synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. EntD family [H]
Homologues:
Organism=Escherichia coli, GI1786797, Length=199, Percent_Identity=32.1608040201005, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR003542 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 25575; Mature: 25575
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPRPAPQDISQQRQHALRQLLSDPIAIATCDPHGDLPEPFAEESACLSPNAVEKRRRE CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHH FAAGRASAHQAMRALDQPCAPILIGPKRAPLWPEGLTGSITHCASCAMAAVGFTRDFTGI HHHCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC GVDVEEDTPLSRDLWDSIASPAEQTWIAAQPDPGQAGKLLFSAKEAAYKAQYSRSERFFG CCCCCCCCCCCHHHHHHHCCCHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC FSGLELVFDTNKGQFTACFTSDQLPYRSGDLLRGRFAITTGVIITAVEISKNELCP CCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHEECCEEEEEEEECCCCCCC >Mature Secondary Structure MIAPRPAPQDISQQRQHALRQLLSDPIAIATCDPHGDLPEPFAEESACLSPNAVEKRRRE CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHH FAAGRASAHQAMRALDQPCAPILIGPKRAPLWPEGLTGSITHCASCAMAAVGFTRDFTGI HHHCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC GVDVEEDTPLSRDLWDSIASPAEQTWIAAQPDPGQAGKLLFSAKEAAYKAQYSRSERFFG CCCCCCCCCCCHHHHHHHCCCHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC FSGLELVFDTNKGQFTACFTSDQLPYRSGDLLRGRFAITTGVIITAVEISKNELCP CCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHEECCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate; Coenzyme A; apo-EntB; apo-serine activating enzyme [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin Coenzyme A + apo-EntB = aryl carrier protein/isochorismatase + 3',5'-ADP Coenzyme A + apo-serine activating enzyme = 3',5'-ADP + serine activating enzyme [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]