Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yjaB [C]

Identifier: 99082226

GI number: 99082226

Start: 2506257

End: 2506721

Strand: Direct

Name: yjaB [C]

Synonym: TM1040_2386

Alternate gene names: 99082226

Gene position: 2506257-2506721 (Clockwise)

Preceding gene: 99082225

Following gene: 99082227

Centisome position: 78.3

GC content: 60.0

Gene sequence:

>465_bases
GTGAGCTCTGTCCTGCGCCCCGCCACACCATTGGATGCCAGCAAGCTTGGCGAGATACTCTATCGGTTTGAGCATGAGAC
ACCCTGGATGCCCAAAGAGCACTCGCTGGCGGAGACCATCGCCTTTTGCGACCGCATGATCGCTCAAGGGTGGATCACAG
TCGCGCAGGACCCCGCATCCGGGCAGATCCTCGGCTTTTGCGCAAAGGACGGGCCGGAAATCTGCGCGCTTTACTTGCTG
CCAGAGCACACCGGGCTCGGCGTTGGCAAACAGCTGCTCGATCAGGCCAAGGAGACAAGCCCCGAGCTGCAACTCTGGAC
GTTTGAGGCCAATCATGCCGCACAGCGCTTTTACAGGCGCGAGGGCTTTGTCGAAACGCAGCGCACCAATGGTCACCGCA
ACAGTGAGGGCCTGCCCGACATCGAATATCGCTGGCAGGTCAAAGAGATGGAGCATGCCACATGA

Upstream 100 bases:

>100_bases
CCATGCGCTTCGCGCCACAACCGCTGACCCTGAAACCCGGCGACGGGCCACCGCATATTCGGCTGGATCGCGCGGCCGAA
TTTCTGATCGGAGACCGTTT

Downstream 100 bases:

>100_bases
GCCGCGACCCGATAGTTTTCGACGTCGAAGACGATGACTCCGCCGCCCCGCATGTCAGCGATGCGCCCCCGGTGCCTGAT
CTCGACACCCCCACAGCGGT

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase; Acetyltransferase Gnat Family Protein; Acetyltransferase Protein

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSSVLRPATPLDASKLGEILYRFEHETPWMPKEHSLAETIAFCDRMIAQGWITVAQDPASGQILGFCAKDGPEICALYLL
PEHTGLGVGKQLLDQAKETSPELQLWTFEANHAAQRFYRREGFVETQRTNGHRNSEGLPDIEYRWQVKEMEHAT

Sequences:

>Translated_154_residues
MSSVLRPATPLDASKLGEILYRFEHETPWMPKEHSLAETIAFCDRMIAQGWITVAQDPASGQILGFCAKDGPEICALYLL
PEHTGLGVGKQLLDQAKETSPELQLWTFEANHAAQRFYRREGFVETQRTNGHRNSEGLPDIEYRWQVKEMEHAT
>Mature_153_residues
SSVLRPATPLDASKLGEILYRFEHETPWMPKEHSLAETIAFCDRMIAQGWITVAQDPASGQILGFCAKDGPEICALYLLP
EHTGLGVGKQLLDQAKETSPELQLWTFEANHAAQRFYRREGFVETQRTNGHRNSEGLPDIEYRWQVKEMEHAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.- [C]

Molecular weight: Translated: 17485; Mature: 17354

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVLRPATPLDASKLGEILYRFEHETPWMPKEHSLAETIAFCDRMIAQGWITVAQDPAS
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC
GQILGFCAKDGPEICALYLLPEHTGLGVGKQLLDQAKETSPELQLWTFEANHAAQRFYRR
CCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHH
EGFVETQRTNGHRNSEGLPDIEYRWQVKEMEHAT
CCCEEECCCCCCCCCCCCCCCCEEEEEHHHCCCC
>Mature Secondary Structure 
SSVLRPATPLDASKLGEILYRFEHETPWMPKEHSLAETIAFCDRMIAQGWITVAQDPAS
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC
GQILGFCAKDGPEICALYLLPEHTGLGVGKQLLDQAKETSPELQLWTFEANHAAQRFYRR
CCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHH
EGFVETQRTNGHRNSEGLPDIEYRWQVKEMEHAT
CCCEEECCCCCCCCCCCCCCCCEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA