Click here to switch to the map view.

The map label for this gene is ycjX [H]

Identifier: 99082225

GI number: 99082225

Start: 2504863

End: 2506260

Strand: Direct

Name: ycjX [H]

Synonym: TM1040_2385

Alternate gene names: 99082225

Gene position: 2504863-2506260 (Clockwise)

Preceding gene: 99082223

Following gene: 99082226

Centisome position: 78.25

GC content: 64.81

Gene sequence:

>1398_bases
ATGGCGGATGGCGTGCTGCGCGGGGCAGAAACACTCGGCGACGCCCTCACGAGCCCATTTGCAGCGCCTTCGCTGAGGCT
GGGTGTGACCGGGCTAGCGCGTGCAGGCAAGACGGTGTTTATCACCTCGCTGGTCGCCAACCTGATCGACAGGGGACGGA
TGTCGCAGCTCTCGGCCCATCGTGACGGGCGCATCGAGGCTGCCTATCTGCAACCCCAACCCGATGACACCGTGCCCCGG
TTTGATTTTGAAAACCATCTCGCCGCCCTGACCGGGCCGAGCCCACATTGGCCAGAGAGCACCCGGGCCGTCTCCGAACT
GCGCCTGAGCCTGCGGATGCGCCCCGGCGGTATGTTCGGCGGTCTGACCGGCCCGCGCATCCTGCATCTCGACATCATTG
ATTATCCGGGCGAGTGGCTCTTGGATCTGTCCTTAATGGACAAGGACTACCTCAGCTGGTCCGAGGATGTGCTGCGCCGC
ATCAAGACCCGTGCGGAGGCTCAAGCGTTCTTGCGCGCGGCAGAGGCTGCATCCCCCGCCGAGAGCCATGACGAACCGCT
GGCGCAGGGGCTGGCGCAGGCCTTCGCAGACTATCTGCAGGAGGCGCGCAACGCCGGGTATTACGATTGTACACCCGGCA
GGTTCTTGTTGCCGGGGGATCTCGCGGGCTCTCCCGTTTTGACATTCGCCCCCCTGCCGCCGAGCGAGGCCCCGCGCGGC
AGCCTCGCGCGCGAAATGGCACGCCGCTTTGAGGCCTATAAGTCGCAGGTGGTGCGCCCGTTCTTTCGCGATCACTTCTC
GCGGATCGACAGGCAAGTGGTCTTGGTGGACGCTCTTGGTGCGCTGCATTCCGGCCCCCCCGCCATGGAGGATCTGCGCC
GCGCCATGACGGATATCCTCAGCACCTTCCGCCCCGGGTCCAACCGTTTTCTGAGTCAGTTGCTACGGGGGAAACGCGTC
GAGAAGATCCTCTTTGCCGCCACCAAGGCCGACCACCTCCACCATCAACAACACCCGCAACTCACGGCAATCATCGAAGC
CTTAACTCATGAAGCCCGTGAGCGGGCGCAATTTGCGGGCGCTGAGACGGCGGCCCTCTCGCTGGCAGCGTTGCGCGCCA
CCACTGAGGAGCTCCGCATGCATGAGGGGGTGGAGTTGCCCTGCGTGCGCGGCATTCTAGCCGACAGCGGCAAGCCGGCT
GCGCTTTATCCCGGCCGCCTGCCCGAAGATCCGCGGCATCTGCTGACGCCAGCCCGACAAGGAGCTGATACCTGGCTTGA
TGGCAGCTACGCCTCCATGCGCTTCGCGCCACAACCGCTGACCCTGAAACCCGGCGACGGGCCACCGCATATTCGGCTGG
ATCGCGCGGCCGAATTTCTGATCGGAGACCGTTTGTGA

Upstream 100 bases:

>100_bases
AGACGGTGATCCGCGCGTGGACACAGGCCCCACACGCCCGCCGACATAAAAGGAGCAGAATGTGTCGCGAGGAACAGGTG
TTACGGGGTTGGCCGCAGAG

Downstream 100 bases:

>100_bases
GCTCTGTCCTGCGCCCCGCCACACCATTGGATGCCAGCAAGCTTGGCGAGATACTCTATCGGTTTGAGCATGAGACACCC
TGGATGCCCAAAGAGCACTC

Product: protein of unknown function DUF463, YcjX-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MADGVLRGAETLGDALTSPFAAPSLRLGVTGLARAGKTVFITSLVANLIDRGRMSQLSAHRDGRIEAAYLQPQPDDTVPR
FDFENHLAALTGPSPHWPESTRAVSELRLSLRMRPGGMFGGLTGPRILHLDIIDYPGEWLLDLSLMDKDYLSWSEDVLRR
IKTRAEAQAFLRAAEAASPAESHDEPLAQGLAQAFADYLQEARNAGYYDCTPGRFLLPGDLAGSPVLTFAPLPPSEAPRG
SLAREMARRFEAYKSQVVRPFFRDHFSRIDRQVVLVDALGALHSGPPAMEDLRRAMTDILSTFRPGSNRFLSQLLRGKRV
EKILFAATKADHLHHQQHPQLTAIIEALTHEARERAQFAGAETAALSLAALRATTEELRMHEGVELPCVRGILADSGKPA
ALYPGRLPEDPRHLLTPARQGADTWLDGSYASMRFAPQPLTLKPGDGPPHIRLDRAAEFLIGDRL

Sequences:

>Translated_465_residues
MADGVLRGAETLGDALTSPFAAPSLRLGVTGLARAGKTVFITSLVANLIDRGRMSQLSAHRDGRIEAAYLQPQPDDTVPR
FDFENHLAALTGPSPHWPESTRAVSELRLSLRMRPGGMFGGLTGPRILHLDIIDYPGEWLLDLSLMDKDYLSWSEDVLRR
IKTRAEAQAFLRAAEAASPAESHDEPLAQGLAQAFADYLQEARNAGYYDCTPGRFLLPGDLAGSPVLTFAPLPPSEAPRG
SLAREMARRFEAYKSQVVRPFFRDHFSRIDRQVVLVDALGALHSGPPAMEDLRRAMTDILSTFRPGSNRFLSQLLRGKRV
EKILFAATKADHLHHQQHPQLTAIIEALTHEARERAQFAGAETAALSLAALRATTEELRMHEGVELPCVRGILADSGKPA
ALYPGRLPEDPRHLLTPARQGADTWLDGSYASMRFAPQPLTLKPGDGPPHIRLDRAAEFLIGDRL
>Mature_464_residues
ADGVLRGAETLGDALTSPFAAPSLRLGVTGLARAGKTVFITSLVANLIDRGRMSQLSAHRDGRIEAAYLQPQPDDTVPRF
DFENHLAALTGPSPHWPESTRAVSELRLSLRMRPGGMFGGLTGPRILHLDIIDYPGEWLLDLSLMDKDYLSWSEDVLRRI
KTRAEAQAFLRAAEAASPAESHDEPLAQGLAQAFADYLQEARNAGYYDCTPGRFLLPGDLAGSPVLTFAPLPPSEAPRGS
LAREMARRFEAYKSQVVRPFFRDHFSRIDRQVVLVDALGALHSGPPAMEDLRRAMTDILSTFRPGSNRFLSQLLRGKRVE
KILFAATKADHLHHQQHPQLTAIIEALTHEARERAQFAGAETAALSLAALRATTEELRMHEGVELPCVRGILADSGKPAA
LYPGRLPEDPRHLLTPARQGADTWLDGSYASMRFAPQPLTLKPGDGPPHIRLDRAAEFLIGDRL

Specific function: Unknown

COG id: COG3106

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1637 [H]

Homologues:

Organism=Escherichia coli, GI1787581, Length=469, Percent_Identity=39.0191897654584, Blast_Score=296, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007413 [H]

Pfam domain/function: PF04317 DUF463 [H]

EC number: NA

Molecular weight: Translated: 51036; Mature: 50905

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGVLRGAETLGDALTSPFAAPSLRLGVTGLARAGKTVFITSLVANLIDRGRMSQLSAH
CCCCHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHC
RDGRIEAAYLQPQPDDTVPRFDFENHLAALTGPSPHWPESTRAVSELRLSLRMRPGGMFG
CCCCEEEEEECCCCCCCCCCCCHHHCEEEECCCCCCCCHHHHHHHHHHHHHEECCCCCCC
GLTGPRILHLDIIDYPGEWLLDLSLMDKDYLSWSEDVLRRIKTRAEAQAFLRAAEAASPA
CCCCCEEEEEEEECCCCCCEEEHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ESHDEPLAQGLAQAFADYLQEARNAGYYDCTPGRFLLPGDLAGSPVLTFAPLPPSEAPRG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCH
SLAREMARRFEAYKSQVVRPFFRDHFSRIDRQVVLVDALGALHSGPPAMEDLRRAMTDIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHH
STFRPGSNRFLSQLLRGKRVEKILFAATKADHLHHQQHPQLTAIIEALTHEARERAQFAG
HHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
AETAALSLAALRATTEELRMHEGVELPCVRGILADSGKPAALYPGRLPEDPRHLLTPARQ
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHCCCCC
GADTWLDGSYASMRFAPQPLTLKPGDGPPHIRLDRAAEFLIGDRL
CCCCCCCCCCCCCEECCCCCEECCCCCCCCEEHHHHHHHHHCCCC
>Mature Secondary Structure 
ADGVLRGAETLGDALTSPFAAPSLRLGVTGLARAGKTVFITSLVANLIDRGRMSQLSAH
CCCHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHC
RDGRIEAAYLQPQPDDTVPRFDFENHLAALTGPSPHWPESTRAVSELRLSLRMRPGGMFG
CCCCEEEEEECCCCCCCCCCCCHHHCEEEECCCCCCCCHHHHHHHHHHHHHEECCCCCCC
GLTGPRILHLDIIDYPGEWLLDLSLMDKDYLSWSEDVLRRIKTRAEAQAFLRAAEAASPA
CCCCCEEEEEEEECCCCCCEEEHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ESHDEPLAQGLAQAFADYLQEARNAGYYDCTPGRFLLPGDLAGSPVLTFAPLPPSEAPRG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCH
SLAREMARRFEAYKSQVVRPFFRDHFSRIDRQVVLVDALGALHSGPPAMEDLRRAMTDIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHH
STFRPGSNRFLSQLLRGKRVEKILFAATKADHLHHQQHPQLTAIIEALTHEARERAQFAG
HHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
AETAALSLAALRATTEELRMHEGVELPCVRGILADSGKPAALYPGRLPEDPRHLLTPARQ
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHCCCCC
GADTWLDGSYASMRFAPQPLTLKPGDGPPHIRLDRAAEFLIGDRL
CCCCCCCCCCCCCEECCCCCEECCCCCCCCEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]