| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082194
Identifier: 99082194
GI number: 99082194
Start: 2475241
End: 2475738
Strand: Direct
Name: 99082194
Synonym: TM1040_2354
Alternate gene names: NA
Gene position: 2475241-2475738 (Clockwise)
Preceding gene: 99082193
Following gene: 99082195
Centisome position: 77.33
GC content: 60.44
Gene sequence:
>498_bases ATGCATTTCCCGCCCGAGGCCGCCCTGTGGTTCCTGCCCTTCGTTGTGCCGCTGTGCTATGTGGTGGCGCTGAACGATCT GCGCAGCATGCGCATTCCGAACTGGACGGTCGACACGCTTGGACTGATCTACATCCTGCTTGGCCTCCTGGTGATGCCGA CATGGGCGGACTACGGCTGGCAGCTGCTGCATCTGCCTGTCGGCATCGCCATCGGATACCTGTTCTACGCCAGCGGTCTG GTCGGGGCGGGAGATGCAAAATTTGCAGGTGCCGCAGCGCCTTATGTGGCTTTTGCGGACCTGAAGCTGATCATGATCAT CTTTGCGATTACGCTATTGTCGGGTTTTCTGGCCCATCGCCTTGCGCGCCACACCCCCCTGCGCCGCCTCGCACCCCATT GGCAGAGCTGGAATACGGGCGCGAAGTTTCCAATGGGATTGTGCCTTGGCGCGACCCTTGCGATCTACCTCGGTCTAGCG GCCTTTGTTCCAGTCTAG
Upstream 100 bases:
>100_bases AGGCCTCCTGCGGGAAGCCATCGAGACCCACCCGCAGCATTTTGATGCTGCCGCCCGCGCGCTGGAAGCGCTCGAAAACG GCTGATCGGAGCCGCGACAG
Downstream 100 bases:
>100_bases CCCCCTGCCCTGAAACGTCGGGCAAATATCCTGAAAATCACCGTGGTCCTTCGCGGAATTGCTGCAGGGCTGCCGTGGTC TTGCCACAGTGTTGAATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MHFPPEAALWFLPFVVPLCYVVALNDLRSMRIPNWTVDTLGLIYILLGLLVMPTWADYGWQLLHLPVGIAIGYLFYASGL VGAGDAKFAGAAAPYVAFADLKLIMIIFAITLLSGFLAHRLARHTPLRRLAPHWQSWNTGAKFPMGLCLGATLAIYLGLA AFVPV
Sequences:
>Translated_165_residues MHFPPEAALWFLPFVVPLCYVVALNDLRSMRIPNWTVDTLGLIYILLGLLVMPTWADYGWQLLHLPVGIAIGYLFYASGL VGAGDAKFAGAAAPYVAFADLKLIMIIFAITLLSGFLAHRLARHTPLRRLAPHWQSWNTGAKFPMGLCLGATLAIYLGLA AFVPV >Mature_165_residues MHFPPEAALWFLPFVVPLCYVVALNDLRSMRIPNWTVDTLGLIYILLGLLVMPTWADYGWQLLHLPVGIAIGYLFYASGL VGAGDAKFAGAAAPYVAFADLKLIMIIFAITLLSGFLAHRLARHTPLRRLAPHWQSWNTGAKFPMGLCLGATLAIYLGLA AFVPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18081; Mature: 18081
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFPPEAALWFLPFVVPLCYVVALNDLRSMRIPNWTVDTLGLIYILLGLLVMPTWADYGW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHCCH QLLHLPVGIAIGYLFYASGLVGAGDAKFAGAAAPYVAFADLKLIMIIFAITLLSGFLAHR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LARHTPLRRLAPHWQSWNTGAKFPMGLCLGATLAIYLGLAAFVPV HHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHFPPEAALWFLPFVVPLCYVVALNDLRSMRIPNWTVDTLGLIYILLGLLVMPTWADYGW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHCCH QLLHLPVGIAIGYLFYASGLVGAGDAKFAGAAAPYVAFADLKLIMIIFAITLLSGFLAHR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LARHTPLRRLAPHWQSWNTGAKFPMGLCLGATLAIYLGLAAFVPV HHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA