| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082195
Identifier: 99082195
GI number: 99082195
Start: 2475902
End: 2477209
Strand: Direct
Name: 99082195
Synonym: TM1040_2355
Alternate gene names: NA
Gene position: 2475902-2477209 (Clockwise)
Preceding gene: 99082194
Following gene: 99082214
Centisome position: 77.35
GC content: 59.4
Gene sequence:
>1308_bases ATGAACATGCAGAACCAGACGGTCATGGCTCCCCCGCCCCCCAAGGGGCTGGCAGAAATGCGTCTGCCACTGGTGATGAT GCGGGACATCCTGCTGAAGACGATGTTTCGAAAGAACCTCGACATGGTGACCGATCTGGCCGGCGCGATCTGCCTGCCGA CGTCTGTCACCCAAGAGCTTGTCGACCTCGCGCGTGGCCAGAAGCTCCTTGAGGCCACAGGGACCCTCAATGCCAATTCC GGCAATGAGATGGGCTATCAGCTGACCGACGCGGGCAAGGCCCGCGCGCTCGATGCGCTGTCGCAGTCGGAATATTTTGG CGCAATGCCGGTGCCGCTTGACGTGTACCGCGAACAGGTAAAGCGCCAGTCGATCCGCAATATCATGGTGACGCGCCAGC AGCTTACTTCGGCCATGGGCCACCTGATCCTGCCCGACAGCCTCCTGGACCACCTCGGCCCCGCCGTAAGCGCAGGCCGG TCGATCCTGATGTATGGTCCACCCGGCAACGGGAAATCCTCTATTTCCAATGGCATCCGGGACGCGCTTGGTGACCGGGT CTATGTGCCCCGCGCGATTGAATACGCCGGCCAGGTCATCACGGTGTACGATCCGATCGTCCACACCGAGGTCGCAGCAG AGCCCGTGGACCCCAATGCCCTGCGCAAGCGGCGCCGTTTTGACGAACGCTATGTCTGCTGCGAGCGCCCCACAGTGGTC ACAGGCGGCGAGCTATCGTTGTCGATGCTGGATCTCGTCTACAACCCCACCGCGCGCACCTATCAGGCCCCGTTGCAACT CAAGTCGACCGGCGGCATTTTCATCGTCGACGACCTTGGACGCCAGGCCGAGAGCCCGCAGGCCCTGGTCAACCGCTGGA TCGTCCCTCTGGAGGAAAGCAAAGATATCCTCGCGCTGCAATCGGGTGAAAAATTCGAAGTCCCCTTTGACACGCTGGTG ATCTTCTCCACCAACTTCCACCCCAATGAGATCTTCGATCAGGCGGCCCTGCGCCGCATCTTCTTCAAGATCAAAATCGA CGGGCCGGATCAGGAAAACTTCCTCAAGATCTTTGCCATGGTGGCGCGCAAGAAAGGCATGCCCCTCGATGAGGCCGCGC TGGTGCATCTTCTGAAGACGAAATACCCCACCATCGACAATGTCTACGCAAACTATCAGCCGGTGTTCCTGATCGACCAG ATGATCTCCATCTGCGAGTTCGAAGGCATCCCCTATCAGATGTCGCCAGAACTGATCGACCGCGCTTGGGCAAACATGTT TGTCAGAGACGAAGTCATCGTCAAATAG
Upstream 100 bases:
>100_bases GCAGGGCTGCCGTGGTCTTGCCACAGTGTTGAATAGTCTCTTTCCAAGATCAAACGTGACGGCATCGCCGTCCCAACCCG CGTGAAAAGAGGCTCGCCTG
Downstream 100 bases:
>100_bases TCCCGGCTCAAACGCCCTGCAAAACCAAAAGGCGCCGGAGGCAACAGCCCCGACGCCTTTTTCATCTTTTCAAAAATATC TCCGCCGGAGGCAGCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase; ATPase With Chaperone Activity; AAA+ Class ATPase With Chaperone Activity; ATPase Central Domain-Containing Protein; Aaa ATPase; ATPase Protein With Chaperone Activity; Chaperone ATPase; AAA Family ATPase; AAA ATPase Central Domain Protein; ATPase Chaperone Activity; ATPase With Chaperone Activity-Like Protein; AAA+ Class ATPase
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNMQNQTVMAPPPPKGLAEMRLPLVMMRDILLKTMFRKNLDMVTDLAGAICLPTSVTQELVDLARGQKLLEATGTLNANS GNEMGYQLTDAGKARALDALSQSEYFGAMPVPLDVYREQVKRQSIRNIMVTRQQLTSAMGHLILPDSLLDHLGPAVSAGR SILMYGPPGNGKSSISNGIRDALGDRVYVPRAIEYAGQVITVYDPIVHTEVAAEPVDPNALRKRRRFDERYVCCERPTVV TGGELSLSMLDLVYNPTARTYQAPLQLKSTGGIFIVDDLGRQAESPQALVNRWIVPLEESKDILALQSGEKFEVPFDTLV IFSTNFHPNEIFDQAALRRIFFKIKIDGPDQENFLKIFAMVARKKGMPLDEAALVHLLKTKYPTIDNVYANYQPVFLIDQ MISICEFEGIPYQMSPELIDRAWANMFVRDEVIVK
Sequences:
>Translated_435_residues MNMQNQTVMAPPPPKGLAEMRLPLVMMRDILLKTMFRKNLDMVTDLAGAICLPTSVTQELVDLARGQKLLEATGTLNANS GNEMGYQLTDAGKARALDALSQSEYFGAMPVPLDVYREQVKRQSIRNIMVTRQQLTSAMGHLILPDSLLDHLGPAVSAGR SILMYGPPGNGKSSISNGIRDALGDRVYVPRAIEYAGQVITVYDPIVHTEVAAEPVDPNALRKRRRFDERYVCCERPTVV TGGELSLSMLDLVYNPTARTYQAPLQLKSTGGIFIVDDLGRQAESPQALVNRWIVPLEESKDILALQSGEKFEVPFDTLV IFSTNFHPNEIFDQAALRRIFFKIKIDGPDQENFLKIFAMVARKKGMPLDEAALVHLLKTKYPTIDNVYANYQPVFLIDQ MISICEFEGIPYQMSPELIDRAWANMFVRDEVIVK >Mature_435_residues MNMQNQTVMAPPPPKGLAEMRLPLVMMRDILLKTMFRKNLDMVTDLAGAICLPTSVTQELVDLARGQKLLEATGTLNANS GNEMGYQLTDAGKARALDALSQSEYFGAMPVPLDVYREQVKRQSIRNIMVTRQQLTSAMGHLILPDSLLDHLGPAVSAGR SILMYGPPGNGKSSISNGIRDALGDRVYVPRAIEYAGQVITVYDPIVHTEVAAEPVDPNALRKRRRFDERYVCCERPTVV TGGELSLSMLDLVYNPTARTYQAPLQLKSTGGIFIVDDLGRQAESPQALVNRWIVPLEESKDILALQSGEKFEVPFDTLV IFSTNFHPNEIFDQAALRRIFFKIKIDGPDQENFLKIFAMVARKKGMPLDEAALVHLLKTKYPTIDNVYANYQPVFLIDQ MISICEFEGIPYQMSPELIDRAWANMFVRDEVIVK
Specific function: Unknown
COG id: COG0606
COG function: function code O; Predicted ATPase with chaperone activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48609; Mature: 48609
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMQNQTVMAPPPPKGLAEMRLPLVMMRDILLKTMFRKNLDMVTDLAGAICLPTSVTQEL CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHH VDLARGQKLLEATGTLNANSGNEMGYQLTDAGKARALDALSQSEYFGAMPVPLDVYREQV HHHHHCHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH KRQSIRNIMVTRQQLTSAMGHLILPDSLLDHLGPAVSAGRSILMYGPPGNGKSSISNGIR HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCEEEEECCCCCCHHHHHHHHH DALGDRVYVPRAIEYAGQVITVYDPIVHTEVAAEPVDPNALRKRRRFDERYVCCERPTVV HHHCCCEECCHHHHHCCCEEEEECCHHHHHHCCCCCCHHHHHHHHCCHHHEEEECCCEEE TGGELSLSMLDLVYNPTARTYQAPLQLKSTGGIFIVDDLGRQAESPQALVNRWIVPLEES ECCCCHHHHHHHHCCCCCCCEECCEEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCCCC KDILALQSGEKFEVPFDTLVIFSTNFHPNEIFDQAALRRIFFKIKIDGPDQENFLKIFAM CCEEEECCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHH VARKKGMPLDEAALVHLLKTKYPTIDNVYANYQPVFLIDQMISICEFEGIPYQMSPELID HHHHCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH RAWANMFVRDEVIVK HHHHHHHHCCCEECC >Mature Secondary Structure MNMQNQTVMAPPPPKGLAEMRLPLVMMRDILLKTMFRKNLDMVTDLAGAICLPTSVTQEL CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHH VDLARGQKLLEATGTLNANSGNEMGYQLTDAGKARALDALSQSEYFGAMPVPLDVYREQV HHHHHCHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH KRQSIRNIMVTRQQLTSAMGHLILPDSLLDHLGPAVSAGRSILMYGPPGNGKSSISNGIR HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCEEEEECCCCCCHHHHHHHHH DALGDRVYVPRAIEYAGQVITVYDPIVHTEVAAEPVDPNALRKRRRFDERYVCCERPTVV HHHCCCEECCHHHHHCCCEEEEECCHHHHHHCCCCCCHHHHHHHHCCHHHEEEECCCEEE TGGELSLSMLDLVYNPTARTYQAPLQLKSTGGIFIVDDLGRQAESPQALVNRWIVPLEES ECCCCHHHHHHHHCCCCCCCEECCEEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCCCC KDILALQSGEKFEVPFDTLVIFSTNFHPNEIFDQAALRRIFFKIKIDGPDQENFLKIFAM CCEEEECCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHH VARKKGMPLDEAALVHLLKTKYPTIDNVYANYQPVFLIDQMISICEFEGIPYQMSPELID HHHHCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH RAWANMFVRDEVIVK HHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA