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The map label for this gene is omp16 [H]

Identifier: 99082187

GI number: 99082187

Start: 2468168

End: 2468791

Strand: Direct

Name: omp16 [H]

Synonym: TM1040_2347

Alternate gene names: 99082187

Gene position: 2468168-2468791 (Clockwise)

Preceding gene: 99082186

Following gene: 99082188

Centisome position: 77.11

GC content: 61.7

Gene sequence:

>624_bases
ATGTTGAAATATGCAGCAATTTTGGGATTGGCCTTGGCGACCGGGGCCTGCGCCTACAAAGAGGCGGGCGAGCCCCTTGA
TCCGAAGTATTTTGGGTCCGCAAACGCCAACAACACCGCCGTGCTCTCGGGTGATCGCAGCTACCGGGTGCAACTTGCCA
CCCGTTTTGCCAACGAAGTTCCGTCAACAATCAACTTCGACTTTGACAGCGCGCGTCTGGATGGCGAGGCCCGCCGGGTT
CTGGACACACAGGCCAAGTGGATCCGTCAGTTCCCGGAGGTGCGGTTCCGGGTCTATGGCCACACCGATGCGGTGGGCAG
CCAGACCTACAACAAACGCCTTGGCTTGAGGCGCGCCCGCGCTGCGGTCAACTATTTGGTTTCGCGCGGCATTTCGCGCT
CGCGGCTTGAGGCCGTCGCCTCCTTTGGCGAGACGCAGCCGTTGATCGTGACCGACCAGCGGGAACGCCGCAACCGGCGC
ACCGTCACCGAAGTCAGCGGCTTTGTCGCGGCGCGGGTGAACGAACTCGATGGCAAATACGCCGCCGTGATCTATCGCGA
CTATGTCGAGAGTGCGGTCTCCCCGACTACGATTTCGGCCAAAACCGCGCTCACGGACGAGTGA

Upstream 100 bases:

>100_bases
CGAACGCGCACAGGCCGGGGCTGCAGGCGAAGTTGCAAATCAGGACTTCAACGGCTCTTATGGCTATCTACTTGATTGAT
CCAGACAAACGGTGGCGCAG

Downstream 100 bases:

>100_bases
TCCTCGGACCGGACGGGCCTGAGACAAATGAGCTGCGCGCCGATTTCAGGCGGGCAGTTCACCGCCTGCCAAAGCGGTAA
CAAGTTGTTAGGCATGATTA

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLKYAAILGLALATGACAYKEAGEPLDPKYFGSANANNTAVLSGDRSYRVQLATRFANEVPSTINFDFDSARLDGEARRV
LDTQAKWIRQFPEVRFRVYGHTDAVGSQTYNKRLGLRRARAAVNYLVSRGISRSRLEAVASFGETQPLIVTDQRERRNRR
TVTEVSGFVAARVNELDGKYAAVIYRDYVESAVSPTTISAKTALTDE

Sequences:

>Translated_207_residues
MLKYAAILGLALATGACAYKEAGEPLDPKYFGSANANNTAVLSGDRSYRVQLATRFANEVPSTINFDFDSARLDGEARRV
LDTQAKWIRQFPEVRFRVYGHTDAVGSQTYNKRLGLRRARAAVNYLVSRGISRSRLEAVASFGETQPLIVTDQRERRNRR
TVTEVSGFVAARVNELDGKYAAVIYRDYVESAVSPTTISAKTALTDE
>Mature_207_residues
MLKYAAILGLALATGACAYKEAGEPLDPKYFGSANANNTAVLSGDRSYRVQLATRFANEVPSTINFDFDSARLDGEARRV
LDTQAKWIRQFPEVRFRVYGHTDAVGSQTYNKRLGLRRARAAVNYLVSRGISRSRLEAVASFGETQPLIVTDQRERRNRR
TVTEVSGFVAARVNELDGKYAAVIYRDYVESAVSPTTISAKTALTDE

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=99, Percent_Identity=32.3232323232323, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 22923; Mature: 22923

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYAAILGLALATGACAYKEAGEPLDPKYFGSANANNTAVLSGDRSYRVQLATRFANEV
CCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHC
PSTINFDFDSARLDGEARRVLDTQAKWIRQFPEVRFRVYGHTDAVGSQTYNKRLGLRRAR
CCEEECCCCCHHCCHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCHHHHHHHHHHHHH
AAVNYLVSRGISRSRLEAVASFGETQPLIVTDQRERRNRRTVTEVSGFVAARVNELDGKY
HHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCE
AAVIYRDYVESAVSPTTISAKTALTDE
EEHHHHHHHHHHCCCCEEECCCCCCCC
>Mature Secondary Structure
MLKYAAILGLALATGACAYKEAGEPLDPKYFGSANANNTAVLSGDRSYRVQLATRFANEV
CCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHC
PSTINFDFDSARLDGEARRVLDTQAKWIRQFPEVRFRVYGHTDAVGSQTYNKRLGLRRAR
CCEEECCCCCHHCCHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCHHHHHHHHHHHHH
AAVNYLVSRGISRSRLEAVASFGETQPLIVTDQRERRNRRTVTEVSGFVAARVNELDGKY
HHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCE
AAVIYRDYVESAVSPTTISAKTALTDE
EEHHHHHHHHHHCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]