Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082183

Identifier: 99082183

GI number: 99082183

Start: 2465040

End: 2465225

Strand: Direct

Name: 99082183

Synonym: TM1040_2343

Alternate gene names: NA

Gene position: 2465040-2465225 (Clockwise)

Preceding gene: 99082181

Following gene: 99082184

Centisome position: 77.01

GC content: 56.99

Gene sequence:

>186_bases
ATGATCAAATTCATCAAAAACTTCCGCAAAGACGAATCCGGCGCCGTGACTGTTGACTGGGTTGTGCTGACCGCAGCTGT
CGCCGTTCTCGGCACTCTGGTGTACTCGCAGATCTCCGGCAGCATCGAGACTGCAACCGCTGCAACCGGCACCTTCCTGG
GCGCCAACGGCTCTTCCAGCTACTAA

Upstream 100 bases:

>100_bases
GGCTCATCCAAAGCGGGACAGCATCTGAAGGTGAGAGAGCAGATGACACGGAACGCCCCGCCGGATGCCAACATTTACCG
ATCCTCAGGAGGGACGAACC

Downstream 100 bases:

>100_bases
TCCACCGCGTTTCGCGACTGGTTTAGCCTGACAGAATGCCGTCCCGGGCCGTGCCATGCTTACGGCCCGGGACATGCCAT
TGCGGCACGTTCGCTGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MIKFIKNFRKDESGAVTVDWVVLTAAVAVLGTLVYSQISGSIETATAATGTFLGANGSSSY

Sequences:

>Translated_61_residues
MIKFIKNFRKDESGAVTVDWVVLTAAVAVLGTLVYSQISGSIETATAATGTFLGANGSSSY
>Mature_61_residues
MIKFIKNFRKDESGAVTVDWVVLTAAVAVLGTLVYSQISGSIETATAATGTFLGANGSSSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6316; Mature: 6316

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFIKNFRKDESGAVTVDWVVLTAAVAVLGTLVYSQISGSIETATAATGTFLGANGSSS
CCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCC
Y
C
>Mature Secondary Structure
MIKFIKNFRKDESGAVTVDWVVLTAAVAVLGTLVYSQISGSIETATAATGTFLGANGSSS
CCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA