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The map label for this gene is lpsJ [H]

Identifier: 99082181

GI number: 99082181

Start: 2463043

End: 2463669

Strand: Direct

Name: lpsJ [H]

Synonym: TM1040_2341

Alternate gene names: 99082181

Gene position: 2463043-2463669 (Clockwise)

Preceding gene: 99082180

Following gene: 99082183

Centisome position: 76.95

GC content: 59.97

Gene sequence:

>627_bases
ATGGCTTGGGACCGCAACCAAATGGCCGCGCGCGCGGCACAGGAACTCGAAGACGGCATGTATGTAAACCTCGGCATCGG
GATTCCGACGCTGGTCGCCAACTACGTGGGTGACAAGGACATCACGTTGCAGTCGGAGAACGGCATGCTCGGCATGGGCC
CTTTCCCCTTTGAGGGCGAAGAAGACCCCGACCTGATCAATGCAGGTAAGCAAACCATCACCGAATTGCGCCGCACGGCC
TATTTCGACAGTGCCACCTCCTTTGGCATGATCCGCGGCGGCAAGATCGCGGCCGCGATCCTCGGCGCGATGGAAGTCGC
AGAGAACGGTGACCTGGCCAACTGGATGATCCCGGGCAAACTGGTCAAAGGTATGGGCGGCGCGATGGATCTGGTCGCCG
GTGTCGGGCGTGTCATCGTGGTCATGGATCACGCCAACAAGCACGGCGAATCCAAGCTCCTGAAAGAATGCACCTTGCCG
CTGACGGGCAAAGGCGTCGTGGACCGCATCATCACCAATCTTGGCGTGTTGGATGTTGTCGAGGGTGGTCTCAAAATCGT
CGAGGTTGCCGAAGGCGTGACCGAAGACGAGCTGCGGGCTGCAACCGAGGCAACCATCGTCAACTGA

Upstream 100 bases:

>100_bases
CATCCACCTGCCCGGCGTCTACGTGCACCGCCTGATCCAGGGCGAACACGAAAAACGTATCGAAAAAGTGACCACCCGCC
CGCGTGAGGAGGCTTGATCC

Downstream 100 bases:

>100_bases
TCGCACGCGCTCAGTGTGAAACGTTGGGCGGGGGCGCGGAGGGCAGAAGCCCTCCGCGCCCCCGCCCCGATCAGATCGCA
GAGCGATCCGACCTGTCACC

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAWDRNQMAARAAQELEDGMYVNLGIGIPTLVANYVGDKDITLQSENGMLGMGPFPFEGEEDPDLINAGKQTITELRRTA
YFDSATSFGMIRGGKIAAAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVIVVMDHANKHGESKLLKECTLP
LTGKGVVDRIITNLGVLDVVEGGLKIVEVAEGVTEDELRAATEATIVN

Sequences:

>Translated_208_residues
MAWDRNQMAARAAQELEDGMYVNLGIGIPTLVANYVGDKDITLQSENGMLGMGPFPFEGEEDPDLINAGKQTITELRRTA
YFDSATSFGMIRGGKIAAAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVIVVMDHANKHGESKLLKECTLP
LTGKGVVDRIITNLGVLDVVEGGLKIVEVAEGVTEDELRAATEATIVN
>Mature_207_residues
AWDRNQMAARAAQELEDGMYVNLGIGIPTLVANYVGDKDITLQSENGMLGMGPFPFEGEEDPDLINAGKQTITELRRTAY
FDSATSFGMIRGGKIAAAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVIVVMDHANKHGESKLLKECTLPL
TGKGVVDRIITNLGVLDVVEGGLKIVEVAEGVTEDELRAATEATIVN

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=201, Percent_Identity=53.7313432835821, Blast_Score=216, Evalue=1e-56,
Organism=Homo sapiens, GI11545841, Length=201, Percent_Identity=55.2238805970149, Blast_Score=213, Evalue=9e-56,
Organism=Escherichia coli, GI1788552, Length=201, Percent_Identity=50.2487562189055, Blast_Score=198, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17531517, Length=202, Percent_Identity=56.4356435643564, Blast_Score=223, Evalue=4e-59,
Organism=Drosophila melanogaster, GI21358325, Length=203, Percent_Identity=57.6354679802956, Blast_Score=227, Evalue=5e-60,
Organism=Drosophila melanogaster, GI24655794, Length=203, Percent_Identity=57.6354679802956, Blast_Score=226, Evalue=6e-60,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 22032; Mature: 21900

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWDRNQMAARAAQELEDGMYVNLGIGIPTLVANYVGDKDITLQSENGMLGMGPFPFEGE
CCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCC
EDPDLINAGKQTITELRRTAYFDSATSFGMIRGGKIAAAILGAMEVAENGDLANWMIPGK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCEEECCHH
LVKGMGGAMDLVAGVGRVIVVMDHANKHGESKLLKECTLPLTGKGVVDRIITNLGVLDVV
HHHCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH
EGGLKIVEVAEGVTEDELRAATEATIVN
HCCHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AWDRNQMAARAAQELEDGMYVNLGIGIPTLVANYVGDKDITLQSENGMLGMGPFPFEGE
CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCC
EDPDLINAGKQTITELRRTAYFDSATSFGMIRGGKIAAAILGAMEVAENGDLANWMIPGK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCEEECCHH
LVKGMGGAMDLVAGVGRVIVVMDHANKHGESKLLKECTLPLTGKGVVDRIITNLGVLDVV
HHHCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH
EGGLKIVEVAEGVTEDELRAATEATIVN
HCCHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]