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The map label for this gene is glcD [H]

Identifier: 99082167

GI number: 99082167

Start: 2446978

End: 2448393

Strand: Reverse

Name: glcD [H]

Synonym: TM1040_2327

Alternate gene names: 99082167

Gene position: 2448393-2446978 (Counterclockwise)

Preceding gene: 99082168

Following gene: 99082161

Centisome position: 76.49

GC content: 64.34

Gene sequence:

>1416_bases
ATGACTTTGAACCCCGCCACCCCCGCCTTTCTCGACACGCTCTCTGCTCGTTTGCCCGCCGATACCCTGCGCCGGCCGGA
GGCGCGCCATCTGGAAGAGCCGCGCGGACGTTATGCCGGGCAGGCCGCCGCCGTTGCGCTGCCCCGCAGCGCCGAAGAGG
TGGCCGAGATCATCCGCGCGGCGCATGCGGCACGGGTGGGAGTTGTTCCCTATGGAGGCGGCACCGGCCTTGTGGGCGGG
CAAGTGATGACCGAGGGCGCAACCCCGATCCTGTTGTCGCTGGAACGGATGCGCGGCATTCGCGCGCTCTATCCAGAGGA
AAACGTGCTGATCGCAGAAGCGGGCGCGGTGCTGGCGGATGTGCAGTCTGCCGCGGCCGAGGCGGGGCGTCTCTTTCCGC
TGTCTCTGGCCGCCGAAGGCTCGGCGCAGATCGGCGGCAACCTTGCGACCAACGCGGGCGGGGTCAATGTGCTGCGCTAT
GGCAATGCGCGCGATCTCTGTCTCGGGCTTGAGGCAGTGCTGCCCTCAGGCGAGATCTGGCACGGGCTGTCACGGCTGCG
CAAAGACAACACCGGCTATGATCTGCGCAACCTCCTGATCGGGGCCGAGGGCACCCTTGGAGTGATCACCGCTGCGGCGC
TCAAACTCTCGCCGATCCCGGCCAACGCGGGCACGGCCATCTTTACGGTCCGCGATCCAGCGGCGGCGGTGGCGCTTCTG
ACGCGGGCGCGCGATGCAGTGGGCGAAGGTGTAAGCGCTTTTGAACTCATCCACCGGCAGGGTCTTGAATTCCTTGCCGA
AAAACTGCCGGAATTGCGCCAGCCCTTCGAGAGCCACCCGGAGTGGTGCGTCCTGATCGAGCTCGGCCTGGGCAAAGGCC
AGGATGCAGAGGCCGCGCTGGCCGACCTCTTTGAACAGGCGATGGACGCAGAGCTGACCGACGACGGCGTGATTGCACAA
TCCGAGGCTCAGCGTCAGGCGCTATGGGCTTTGCGCGAACATATCCCGGAGGCGAACCGCCTGATCGGGTCTGTCTCAAG
CCACGACATTTCGGTGCCGATTTCGCGCATTCCCGAGTTCATTCCCGCGGGCTGGAAAGCGATTGCAAATCTCGATCCGT
CGCTCCGGATCAACTGCTTTGGCCATCTGGGCGATGGCAACCTGCACTACAACGTCTTTCCCGCGCCGGGCCGGTCGCGC
GCGGATTACGAAGACCTGCGCGGGGATGTGAAACGTATCATCCATGACCTCGTGTATGACTATGGCGGCTCCATGAGTGC
AGAGCACGGGATTGGCCGCCTAAAGGTCGGTGATCTTGAACGCTATGGCGATCCGGTCAAGCTTGCTGCGATGAGAGCCA
TCAAAGAGGCGCTTGACCCTCATGGCATCATGAACCCTGGCGCCGTTGTGGTCTGA

Upstream 100 bases:

>100_bases
CGCCGGGGCAAGACCACCGCCGGTCAGGCCTGAGTGTAGCAACGTCGCACCGCGCCATAACGGCCTTGCCTTTGGGCGGT
GGATTCTGGATTCATGGGGC

Downstream 100 bases:

>100_bases
TACAACGACGCCCAAAAGACACTGCCGATTGGCAACAGCGGCCCTACAAGAAAGGGGAGCCCGGAGGCCCCCCTTGTCGC
CACGCCTAATGGGCGCGAAC

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MTLNPATPAFLDTLSARLPADTLRRPEARHLEEPRGRYAGQAAAVALPRSAEEVAEIIRAAHAARVGVVPYGGGTGLVGG
QVMTEGATPILLSLERMRGIRALYPEENVLIAEAGAVLADVQSAAAEAGRLFPLSLAAEGSAQIGGNLATNAGGVNVLRY
GNARDLCLGLEAVLPSGEIWHGLSRLRKDNTGYDLRNLLIGAEGTLGVITAAALKLSPIPANAGTAIFTVRDPAAAVALL
TRARDAVGEGVSAFELIHRQGLEFLAEKLPELRQPFESHPEWCVLIELGLGKGQDAEAALADLFEQAMDAELTDDGVIAQ
SEAQRQALWALREHIPEANRLIGSVSSHDISVPISRIPEFIPAGWKAIANLDPSLRINCFGHLGDGNLHYNVFPAPGRSR
ADYEDLRGDVKRIIHDLVYDYGGSMSAEHGIGRLKVGDLERYGDPVKLAAMRAIKEALDPHGIMNPGAVVV

Sequences:

>Translated_471_residues
MTLNPATPAFLDTLSARLPADTLRRPEARHLEEPRGRYAGQAAAVALPRSAEEVAEIIRAAHAARVGVVPYGGGTGLVGG
QVMTEGATPILLSLERMRGIRALYPEENVLIAEAGAVLADVQSAAAEAGRLFPLSLAAEGSAQIGGNLATNAGGVNVLRY
GNARDLCLGLEAVLPSGEIWHGLSRLRKDNTGYDLRNLLIGAEGTLGVITAAALKLSPIPANAGTAIFTVRDPAAAVALL
TRARDAVGEGVSAFELIHRQGLEFLAEKLPELRQPFESHPEWCVLIELGLGKGQDAEAALADLFEQAMDAELTDDGVIAQ
SEAQRQALWALREHIPEANRLIGSVSSHDISVPISRIPEFIPAGWKAIANLDPSLRINCFGHLGDGNLHYNVFPAPGRSR
ADYEDLRGDVKRIIHDLVYDYGGSMSAEHGIGRLKVGDLERYGDPVKLAAMRAIKEALDPHGIMNPGAVVV
>Mature_470_residues
TLNPATPAFLDTLSARLPADTLRRPEARHLEEPRGRYAGQAAAVALPRSAEEVAEIIRAAHAARVGVVPYGGGTGLVGGQ
VMTEGATPILLSLERMRGIRALYPEENVLIAEAGAVLADVQSAAAEAGRLFPLSLAAEGSAQIGGNLATNAGGVNVLRYG
NARDLCLGLEAVLPSGEIWHGLSRLRKDNTGYDLRNLLIGAEGTLGVITAAALKLSPIPANAGTAIFTVRDPAAAVALLT
RARDAVGEGVSAFELIHRQGLEFLAEKLPELRQPFESHPEWCVLIELGLGKGQDAEAALADLFEQAMDAELTDDGVIAQS
EAQRQALWALREHIPEANRLIGSVSSHDISVPISRIPEFIPAGWKAIANLDPSLRINCFGHLGDGNLHYNVFPAPGRSRA
DYEDLRGDVKRIIHDLVYDYGGSMSAEHGIGRLKVGDLERYGDPVKLAAMRAIKEALDPHGIMNPGAVVV

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=428, Percent_Identity=36.4485981308411, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI37595756, Length=459, Percent_Identity=30.9368191721133, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI37595754, Length=482, Percent_Identity=29.4605809128631, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI4501993, Length=178, Percent_Identity=31.4606741573034, Blast_Score=86, Evalue=6e-17,
Organism=Escherichia coli, GI1789351, Length=441, Percent_Identity=30.8390022675737, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1787977, Length=504, Percent_Identity=25.7936507936508, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI48994907, Length=174, Percent_Identity=29.8850574712644, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17534361, Length=460, Percent_Identity=32.6086956521739, Blast_Score=241, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI71992373, Length=445, Percent_Identity=28.9887640449438, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71992381, Length=445, Percent_Identity=27.4157303370787, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71992392, Length=398, Percent_Identity=27.6381909547739, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17556096, Length=178, Percent_Identity=28.0898876404494, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320023, Length=457, Percent_Identity=33.6980306345733, Blast_Score=268, Evalue=1e-72,
Organism=Saccharomyces cerevisiae, GI6320764, Length=437, Percent_Identity=33.6384439359268, Blast_Score=256, Evalue=6e-69,
Organism=Saccharomyces cerevisiae, GI6320027, Length=454, Percent_Identity=28.8546255506608, Blast_Score=149, Evalue=7e-37,
Organism=Drosophila melanogaster, GI18921117, Length=440, Percent_Identity=34.7727272727273, Blast_Score=241, Evalue=6e-64,
Organism=Drosophila melanogaster, GI24639277, Length=440, Percent_Identity=34.7727272727273, Blast_Score=241, Evalue=6e-64,
Organism=Drosophila melanogaster, GI24639275, Length=440, Percent_Identity=34.7727272727273, Blast_Score=241, Evalue=6e-64,
Organism=Drosophila melanogaster, GI24653753, Length=179, Percent_Identity=31.8435754189944, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 49981; Mature: 49849

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNPATPAFLDTLSARLPADTLRRPEARHLEEPRGRYAGQAAAVALPRSAEEVAEIIRA
CCCCCCCHHHHHHHHHCCCHHHHCCCCHHHCCCCCHHHCCCHHEEECCCCHHHHHHHHHH
AHAARVGVVPYGGGTGLVGGQVMTEGATPILLSLERMRGIRALYPEENVLIAEAGAVLAD
HHHHHEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCHHHCCCCCCEEEEECCHHHHH
VQSAAAEAGRLFPLSLAAEGSAQIGGNLATNAGGVNVLRYGNARDLCLGLEAVLPSGEIW
HHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHCCCCHHH
HGLSRLRKDNTGYDLRNLLIGAEGTLGVITAAALKLSPIPANAGTAIFTVRDPAAAVALL
HHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHHHEECCCCCCCCCEEEEECCHHHHHHHH
TRARDAVGEGVSAFELIHRQGLEFLAEKLPELRQPFESHPEWCVLIELGLGKGQDAEAAL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEECCCCCCCHHHHH
ADLFEQAMDAELTDDGVIAQSEAQRQALWALREHIPEANRLIGSVSSHDISVPISRIPEF
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEECCHHHCHHH
IPAGWKAIANLDPSLRINCFGHLGDGNLHYNVFPAPGRSRADYEDLRGDVKRIIHDLVYD
HCCCHHHHHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
YGGSMSAEHGIGRLKVGDLERYGDPVKLAAMRAIKEALDPHGIMNPGAVVV
CCCCCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEC
>Mature Secondary Structure 
TLNPATPAFLDTLSARLPADTLRRPEARHLEEPRGRYAGQAAAVALPRSAEEVAEIIRA
CCCCCCHHHHHHHHHCCCHHHHCCCCHHHCCCCCHHHCCCHHEEECCCCHHHHHHHHHH
AHAARVGVVPYGGGTGLVGGQVMTEGATPILLSLERMRGIRALYPEENVLIAEAGAVLAD
HHHHHEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCHHHCCCCCCEEEEECCHHHHH
VQSAAAEAGRLFPLSLAAEGSAQIGGNLATNAGGVNVLRYGNARDLCLGLEAVLPSGEIW
HHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHCCCCHHH
HGLSRLRKDNTGYDLRNLLIGAEGTLGVITAAALKLSPIPANAGTAIFTVRDPAAAVALL
HHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHHHEECCCCCCCCCEEEEECCHHHHHHHH
TRARDAVGEGVSAFELIHRQGLEFLAEKLPELRQPFESHPEWCVLIELGLGKGQDAEAAL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEECCCCCCCHHHHH
ADLFEQAMDAELTDDGVIAQSEAQRQALWALREHIPEANRLIGSVSSHDISVPISRIPEF
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEECCHHHCHHH
IPAGWKAIANLDPSLRINCFGHLGDGNLHYNVFPAPGRSRADYEDLRGDVKRIIHDLVYD
HCCCHHHHHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
YGGSMSAEHGIGRLKVGDLERYGDPVKLAAMRAIKEALDPHGIMNPGAVVV
CCCCCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]