Click here to switch to the map view.

The map label for this gene is ybaR [H]

Identifier: 99082161

GI number: 99082161

Start: 2441144

End: 2442754

Strand: Reverse

Name: ybaR [H]

Synonym: TM1040_2321

Alternate gene names: 99082161

Gene position: 2442754-2441144 (Counterclockwise)

Preceding gene: 99082167

Following gene: 99082158

Centisome position: 76.31

GC content: 61.2

Gene sequence:

>1611_bases
ATGACACGCGGCGTATTGGGCCTTTTGGCCAAGAATATCTCTCCTCCCAATCTTTCCATCATGCAGGATGAGGGTTTTAC
GGTGGCGCGTGTGCGCACCGAGCTGTTGTCCGGGCTGACGGTGGCCCTGGCGCTGGTGCCGGAGGCGGTGGCCTTTGCCT
TTGTGGCTGGGGTGCATCCTCTGGTGGGGCTCTATGCGGCCTTTCTGGTGGGGCTGATCACGGCGCTCATCGGGGGGCGT
CCGGGCATGATTTCGGGGGCGACCGGAGCGCTGGCAGTGGTGATGGTGGCGCTGGTGGCCGAGCACGGGGTGGAGTATCT
CTTTGCCACCGTGGTTTTGATGGGCATCCTGCAGGTCATCGCCGGTGTCATGCATTGGGGCAAGTTCATCCGACTGGTGC
CGCATCCGGTGATGCTTGGCTTTGTGAACGGTCTGGCGATCGTGATTTTCCTAGCGCAGCTTACGCAGTTCAAGCAACCC
GGCACCGGGGGCGAAGAATGGCTTGCCGGGCCGCAGCTTCTGATGATGCTGGGGCTTGTGGTGCTGACCATGGTGATCAT
CTGGGGCATGCCCAAGCTGACCAAGGTGATCCCGGCGCCGCTGGCGGGGATCGGGATTACAGCGATCATCGTGATCGCCT
TTGGTCTTGATGTGCCGCGCGTGGGCGACATGGCGTCCATCGAGGGGGGCTTGCCAAGCTTTCACGTGCCGATGGTGCCG
TTCAACATGGAAACGCTGCAGATCATCCTGCCCTATGCGGTCATCCTGGCGGCGATTGGCCTCATCGAGAGTCTTTTGAC
CCTGAACCTTGTGGGCGAAATCACCGGCAAGCGGGGCGGCGCGAGCCAGGAGTGCATCGCGCAGGGGACATCGAATATTG
TTACCGGTTTCTTTGGCGGCATGGGCGGTTGTGCGATGATTGGTCAGTCGATGATCAACGTGAATTCGGGCGGGCGCACG
CGGATCGCGGCGATTGCGGCAGCCCTGTTTCTGTTGCTGTTCATCGTGGCGGCCTCTCCGCTGATTGAACAGATCCCGCT
GGCAGCGCTCGTGGGCGTGATGTTCATGGTGGTGATCGGGACATTTGCGTGGAACAGCTTCAAGATCATGACCAAGGTAC
CGCTGACGGATGCCTTTGTGATCGTGCTGGTGACCGTGGTCACGGTGATGACCGACCTTGCGATCGCTGTTGTGGTCGGG
GTCATCGTGTCGGCGCTGGCCTACGCGTGGAACAACGCGCGGCGCATTCACGCGATCACCCGCGACAGCGTGAGCGAGAA
AGGCGCCAAGGTCTATGAGATCCAGGGGCCGCTGTTCTTTGGCTCGACCGACGGGTTCATCGAGCTCTTTGACGTAGAAA
ACGATCCCGACGTGGTGATCGTGGACTTTGCGGCCTCGCGGGTTGTGGATCAGTCGGCGCTGCAGGCCATCGAGGCTGTG
GCCGGAAAATACGAGGCCGCTGGCAAGGCGCTGCAACTGCGTCACCTGAGCCGCGATTGTCACGAGCTCCTGTCCAAGGC
CGGGCATCTGATGGTCGATAGCGACGATGATCCGGAATATGGCCTCGCGGTGGACTACTCGGTCAAAACCGGGGTTCTGG
GCGGTCACTAA

Upstream 100 bases:

>100_bases
GGCTTTGAGGCCTTGTTTTTAGGCCTTGGCTTGTGTCACGCGGGCAGAGAGGCTAACAGGCGCTCAAAACAAGCTTCCCG
AATTCACAGGTTTTGGTGTC

Downstream 100 bases:

>100_bases
AGCCCCTACAGAGGTCTCAAAACGGTCGCGGTCCCCAAAGGGACCGCGGCTTTTTTATATGCATTGTCAGCTGGGTGCTG
GCAGGGCTCGGCCCGGCGCC

Product: sulphate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MTRGVLGLLAKNISPPNLSIMQDEGFTVARVRTELLSGLTVALALVPEAVAFAFVAGVHPLVGLYAAFLVGLITALIGGR
PGMISGATGALAVVMVALVAEHGVEYLFATVVLMGILQVIAGVMHWGKFIRLVPHPVMLGFVNGLAIVIFLAQLTQFKQP
GTGGEEWLAGPQLLMMLGLVVLTMVIIWGMPKLTKVIPAPLAGIGITAIIVIAFGLDVPRVGDMASIEGGLPSFHVPMVP
FNMETLQIILPYAVILAAIGLIESLLTLNLVGEITGKRGGASQECIAQGTSNIVTGFFGGMGGCAMIGQSMINVNSGGRT
RIAAIAAALFLLLFIVAASPLIEQIPLAALVGVMFMVVIGTFAWNSFKIMTKVPLTDAFVIVLVTVVTVMTDLAIAVVVG
VIVSALAYAWNNARRIHAITRDSVSEKGAKVYEIQGPLFFGSTDGFIELFDVENDPDVVIVDFAASRVVDQSALQAIEAV
AGKYEAAGKALQLRHLSRDCHELLSKAGHLMVDSDDDPEYGLAVDYSVKTGVLGGH

Sequences:

>Translated_536_residues
MTRGVLGLLAKNISPPNLSIMQDEGFTVARVRTELLSGLTVALALVPEAVAFAFVAGVHPLVGLYAAFLVGLITALIGGR
PGMISGATGALAVVMVALVAEHGVEYLFATVVLMGILQVIAGVMHWGKFIRLVPHPVMLGFVNGLAIVIFLAQLTQFKQP
GTGGEEWLAGPQLLMMLGLVVLTMVIIWGMPKLTKVIPAPLAGIGITAIIVIAFGLDVPRVGDMASIEGGLPSFHVPMVP
FNMETLQIILPYAVILAAIGLIESLLTLNLVGEITGKRGGASQECIAQGTSNIVTGFFGGMGGCAMIGQSMINVNSGGRT
RIAAIAAALFLLLFIVAASPLIEQIPLAALVGVMFMVVIGTFAWNSFKIMTKVPLTDAFVIVLVTVVTVMTDLAIAVVVG
VIVSALAYAWNNARRIHAITRDSVSEKGAKVYEIQGPLFFGSTDGFIELFDVENDPDVVIVDFAASRVVDQSALQAIEAV
AGKYEAAGKALQLRHLSRDCHELLSKAGHLMVDSDDDPEYGLAVDYSVKTGVLGGH
>Mature_535_residues
TRGVLGLLAKNISPPNLSIMQDEGFTVARVRTELLSGLTVALALVPEAVAFAFVAGVHPLVGLYAAFLVGLITALIGGRP
GMISGATGALAVVMVALVAEHGVEYLFATVVLMGILQVIAGVMHWGKFIRLVPHPVMLGFVNGLAIVIFLAQLTQFKQPG
TGGEEWLAGPQLLMMLGLVVLTMVIIWGMPKLTKVIPAPLAGIGITAIIVIAFGLDVPRVGDMASIEGGLPSFHVPMVPF
NMETLQIILPYAVILAAIGLIESLLTLNLVGEITGKRGGASQECIAQGTSNIVTGFFGGMGGCAMIGQSMINVNSGGRTR
IAAIAAALFLLLFIVAASPLIEQIPLAALVGVMFMVVIGTFAWNSFKIMTKVPLTDAFVIVLVTVVTVMTDLAIAVVVGV
IVSALAYAWNNARRIHAITRDSVSEKGAKVYEIQGPLFFGSTDGFIELFDVENDPDVVIVDFAASRVVDQSALQAIEAVA
GKYEAAGKALQLRHLSRDCHELLSKAGHLMVDSDDDPEYGLAVDYSVKTGVLGGH

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI94721259, Length=413, Percent_Identity=23.728813559322, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI94721255, Length=413, Percent_Identity=23.728813559322, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI94721253, Length=413, Percent_Identity=23.728813559322, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI94721257, Length=413, Percent_Identity=23.728813559322, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI47131207, Length=489, Percent_Identity=22.9038854805726, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI20336272, Length=489, Percent_Identity=22.9038854805726, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI4505697, Length=493, Percent_Identity=22.7180527383367, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI20336282, Length=566, Percent_Identity=20.8480565371025, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI16306483, Length=566, Percent_Identity=20.8480565371025, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87081859, Length=526, Percent_Identity=28.1368821292776, Blast_Score=158, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17551690, Length=495, Percent_Identity=18.989898989899, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17566848, Length=468, Percent_Identity=23.7179487179487, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193203292, Length=501, Percent_Identity=21.1576846307385, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI19922482, Length=503, Percent_Identity=21.8687872763419, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21358229, Length=368, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI85815873, Length=478, Percent_Identity=23.2217573221757, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24647160, Length=123, Percent_Identity=28.4552845528455, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355087, Length=123, Percent_Identity=28.4552845528455, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21358633, Length=121, Percent_Identity=32.2314049586777, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 56273; Mature: 56142

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGVLGLLAKNISPPNLSIMQDEGFTVARVRTELLSGLTVALALVPEAVAFAFVAGVHP
CCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGLYAAFLVGLITALIGGRPGMISGATGALAVVMVALVAEHGVEYLFATVVLMGILQVI
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVMHWGKFIRLVPHPVMLGFVNGLAIVIFLAQLTQFKQPGTGGEEWLAGPQLLMMLGLV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
VLTMVIIWGMPKLTKVIPAPLAGIGITAIIVIAFGLDVPRVGDMASIEGGLPSFHVPMVP
HHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCC
FNMETLQIILPYAVILAAIGLIESLLTLNLVGEITGKRGGASQECIAQGTSNIVTGFFGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHCC
MGGCAMIGQSMINVNSGGRTRIAAIAAALFLLLFIVAASPLIEQIPLAALVGVMFMVVIG
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHH
TFAWNSFKIMTKVPLTDAFVIVLVTVVTVMTDLAIAVVVGVIVSALAYAWNNARRIHAIT
HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH
RDSVSEKGAKVYEIQGPLFFGSTDGFIELFDVENDPDVVIVDFAASRVVDQSALQAIEAV
HHHHHHCCCEEEEEECCEEECCCCCEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHH
AGKYEAAGKALQLRHLSRDCHELLSKAGHLMVDSDDDPEYGLAVDYSVKTGVLGGH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TRGVLGLLAKNISPPNLSIMQDEGFTVARVRTELLSGLTVALALVPEAVAFAFVAGVHP
CCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGLYAAFLVGLITALIGGRPGMISGATGALAVVMVALVAEHGVEYLFATVVLMGILQVI
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVMHWGKFIRLVPHPVMLGFVNGLAIVIFLAQLTQFKQPGTGGEEWLAGPQLLMMLGLV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
VLTMVIIWGMPKLTKVIPAPLAGIGITAIIVIAFGLDVPRVGDMASIEGGLPSFHVPMVP
HHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCC
FNMETLQIILPYAVILAAIGLIESLLTLNLVGEITGKRGGASQECIAQGTSNIVTGFFGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHCC
MGGCAMIGQSMINVNSGGRTRIAAIAAALFLLLFIVAASPLIEQIPLAALVGVMFMVVIG
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHH
TFAWNSFKIMTKVPLTDAFVIVLVTVVTVMTDLAIAVVVGVIVSALAYAWNNARRIHAIT
HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH
RDSVSEKGAKVYEIQGPLFFGSTDGFIELFDVENDPDVVIVDFAASRVVDQSALQAIEAV
HHHHHHCCCEEEEEECCEEECCCCCEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHH
AGKYEAAGKALQLRHLSRDCHELLSKAGHLMVDSDDDPEYGLAVDYSVKTGVLGGH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]