| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082151
Identifier: 99082151
GI number: 99082151
Start: 2432547
End: 2433074
Strand: Reverse
Name: 99082151
Synonym: TM1040_2311
Alternate gene names: NA
Gene position: 2433074-2432547 (Counterclockwise)
Preceding gene: 99082152
Following gene: 99082150
Centisome position: 76.01
GC content: 61.17
Gene sequence:
>528_bases ATGACCGGCAAGATCCTGTCGATCATCCTCATCGTCTCTGGCCTCGTGGCCGGGATCGCGATGTATTATCTGCAAGTCTA CGGCTTTTACGACGAGGTTGTCGCAGAGCCCGGTCGCGATGTGGTGCTCATGCCTATCGGGGGCGAGGCGCCGCAGGCCA TCGCCTATAGCGATTTTAAGGCCATCGACGCGGACAGCTCGCCCATTCGCTACCGCGCCTGTTTTGCAACGCCTCTGAAA CCCGCCGAGCTGGCGCAGCTCTATGAGCTTTCCGAGGCGCGCGATCCGCGCAATGCGCCGGAGTGGTTCGACTGCTTTGA CGCTGCCGCCATCGGCGCGGCCCTCAAGGACGGGCGCGCGCGGGCGTTTATCTCTGAAAAGAACATCGAATTTGGTGTCG ATCGTATCGTGGCTGTCACCGAGGATGGCCGAGGCTACGTCTGGCACGAACTGAACAACTGTGGCGAGAAGGCCTATGAC GGCACCATCGTGGGCGAGGAATGCCCCAAGCGGCCGCAAAGCAACTGA
Upstream 100 bases:
>100_bases AAGCAATGCGCCGATGCCTTTGTGCTGACCGAGGCGGGAGGTCACACCGAAGAGACCGCAGGCGAAACAGCCGCCTGAGC CGCGCAAAGGAGCATCTGAC
Downstream 100 bases:
>100_bases TCCGGCGCAGCTCTGCCTGTCGCCACATCCCTTTATCGCCGTGAGCGCACGGCAGACCGAACCGTTGAGGACACGTCATG GCTGATCTTCTGATCGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFKAIDADSSPIRYRACFATPLK PAELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRARAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYD GTIVGEECPKRPQSN
Sequences:
>Translated_175_residues MTGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFKAIDADSSPIRYRACFATPLK PAELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRARAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYD GTIVGEECPKRPQSN >Mature_174_residues TGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFKAIDADSSPIRYRACFATPLKP AELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRARAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYDG TIVGEECPKRPQSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19145; Mature: 19014
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCE AIDADSSPIRYRACFATPLKPAELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRA EECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCE RAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYDGTIVGEECPKRPQSN EEEEECCCCCCCCCEEEEEEECCCEEEEHHHHCCCCHHCCCEEECCCCCCCCCCC >Mature Secondary Structure TGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCE AIDADSSPIRYRACFATPLKPAELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRA EECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCE RAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYDGTIVGEECPKRPQSN EEEEECCCCCCCCCEEEEEEECCCEEEEHHHHCCCCHHCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA