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The map label for this gene is azlB [H]

Identifier: 99082141

GI number: 99082141

Start: 2420155

End: 2420613

Strand: Reverse

Name: azlB [H]

Synonym: TM1040_2301

Alternate gene names: 99082141

Gene position: 2420613-2420155 (Counterclockwise)

Preceding gene: 99082142

Following gene: 99082140

Centisome position: 75.62

GC content: 64.92

Gene sequence:

>459_bases
ATGACCGGGCTGGATGCAACCGATCTGGCTCTTTTGCGGGCGCTGTCGCAGGACGCCACCCAGACGGCCGGGGCCTTGGG
GCGGGCGCTTGGCCTCAGCCAGCCTGCCACATGGCGGCGGATCAAACGGCTGGAAGAGGCGGGAATCCTGTCGCACCGCG
TGCTGGATCTGGACCTGCAAAAGCTGGGGTTTGGCGTCACGGTCTTTGTGGGCGTAAAACTTGCCACCAAGGGACGGGTG
AGCCTTGACGATTTCGAGCGCGCAGTCTCGGCCATTCCCGAAGTGCAGACAGTCGAACATGTGCTGGGGTTTTATGACTA
TCGCCTGCGGGTCGTGGCGCGCGACATCGCCGATTTCGAACGCGTCCTGCGGCGGCGGATCATGACGCTGCCGGGGGCGG
GTAATGTGGACGCCAATGTGCTCCTGTCCGAAGAACGCCGCCCCGGCCCCCTGGGCTGA

Upstream 100 bases:

>100_bases
AGGCGCTTTACCGCGACCACATCCTGCAGCTGCCAAATATCACGGATATTGAGGCGCTGATGCATGTGGCGCGGATCACC
ACCCGCACGGCGCTGCCGCT

Downstream 100 bases:

>100_bases
ACCGGATTAATCGGATTGTGCGACAAGAGCTGTAGCCACGTGGCGCTTGAGCCAGCAGAGCGGCTCTGCCATGACAGGGG
CAACCGGCCTCAGCCAACAC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTGLDATDLALLRALSQDATQTAGALGRALGLSQPATWRRIKRLEEAGILSHRVLDLDLQKLGFGVTVFVGVKLATKGRV
SLDDFERAVSAIPEVQTVEHVLGFYDYRLRVVARDIADFERVLRRRIMTLPGAGNVDANVLLSEERRPGPLG

Sequences:

>Translated_152_residues
MTGLDATDLALLRALSQDATQTAGALGRALGLSQPATWRRIKRLEEAGILSHRVLDLDLQKLGFGVTVFVGVKLATKGRV
SLDDFERAVSAIPEVQTVEHVLGFYDYRLRVVARDIADFERVLRRRIMTLPGAGNVDANVLLSEERRPGPLG
>Mature_151_residues
TGLDATDLALLRALSQDATQTAGALGRALGLSQPATWRRIKRLEEAGILSHRVLDLDLQKLGFGVTVFVGVKLATKGRVS
LDDFERAVSAIPEVQTVEHVLGFYDYRLRVVARDIADFERVLRRRIMTLPGAGNVDANVLLSEERRPGPLG

Specific function: Transcriptional repressor of the azlBCD operon involved in branched-chain amino acid transport [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=141, Percent_Identity=34.0425531914894, Blast_Score=86, Evalue=7e-19,
Organism=Escherichia coli, GI1787116, Length=141, Percent_Identity=26.9503546099291, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 16648; Mature: 16517

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLDATDLALLRALSQDATQTAGALGRALGLSQPATWRRIKRLEEAGILSHRVLDLDLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLGFGVTVFVGVKLATKGRVSLDDFERAVSAIPEVQTVEHVLGFYDYRLRVVARDIADFE
HHCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLRRRIMTLPGAGNVDANVLLSEERRPGPLG
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
TGLDATDLALLRALSQDATQTAGALGRALGLSQPATWRRIKRLEEAGILSHRVLDLDLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLGFGVTVFVGVKLATKGRVSLDDFERAVSAIPEVQTVEHVLGFYDYRLRVVARDIADFE
HHCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLRRRIMTLPGAGNVDANVLLSEERRPGPLG
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377 [H]