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The map label for this gene is 99082121

Identifier: 99082121

GI number: 99082121

Start: 2398532

End: 2400055

Strand: Reverse

Name: 99082121

Synonym: TM1040_2281

Alternate gene names: NA

Gene position: 2400055-2398532 (Counterclockwise)

Preceding gene: 99082123

Following gene: 99082118

Centisome position: 74.98

GC content: 60.56

Gene sequence:

>1524_bases
ATGACACGGCTTGTTTTGGTGCTGGGGGACCAGCTTTCAGAAGGGTTGTCGGCGCTCAAAGCGGCAGACCCTGCACATGA
TGTGGTGGTGATGGCGGAGGTGATGGACGAGGGCACATATGTCCCGCATCACCCCAAGAAGATCGCGTTGGTGCTGGCGG
CGATGCGCAAGTTTGCGCAGCGTCTAGAAGGGCAGGGCTGGCGTGTGGCCTATCGGCGTCTGGACGAGGATGGCGCGGAG
AGCATCGTGGGCGAACTCTTGCGCCGGGCCGAAGAATTTGGCGCCTCGGAGGTGCTGGCCACCACGCCGGGCGAGTGGCG
GCTGATCCACGCGTTGAAATATGCCCCCCTCAAGGTTCATTTTCATGCCGACGACCGCTTTCTCGCCACGCGCGAGGATT
TCACCGAGTGGGCCGAGGGCAAAAAACAGCTCCGGATGGAGTATTTCTATCGCCTGATGCGCAAGAAAACCGGCCTTCTG
ATGGAGGGAGACACCCCGGTTGGCGGCAAGTGGAATTACGATTCAGAGAACCGCAAGGCGCCCCCCAAGATCATCGACCA
CAAGGGGCCACCCCGGTTTGAACCGGACGCCGAGGTCGAGGAGGTGCTGGATCTGGTGGAGGCGCGCTTTGGCACTCATT
TCGGGGATCTGCGCCCGTTCTGGTTTGCCACAACCCGCGAAGAAGCGCAGGAGGCGCTTGCGCATTTCATCACCCACGCT
CTGCCGCAGTTCGGGGACTATCAGGATGCGATGATGACGGATGAGCGCTGGCTCTATCACTCCATCCTGTCGCCCTATCT
CAACATCGGTCTGTTGACCCCGCTGGAGATCTGCGAGGCGGCCGAGGTCGCACATCAGGACGGCCATGCGCCGCTCAATG
CGGTCGAAGGTTTCATCCGGCAGATCCTCGGGTGGCGGGAGTATGTGCGGGGGATCTATTTCCTCGAGGGGGAGGATTAC
CCCACGCGCAACGCACTGGAACAAACCCGAGCGCTGCCCGCGCTCTATTGGGGGGCGGAGACGGACATGCATTGCCTCTC
GCAAGCGGTGGAGCAGACCGGGCAGGAGGCCTACGCCCACCACATCCAGCGGCTGATGGTGACCGGGAATTTTGCGCTTT
TGGCCGGGGTTGATCCGGCACAGGTGCACGAATGGTATCTCGCAGTGTATGCAGATGCGTTTGAGTGGGTCGAGGCGCCC
AACACCGTCGGCATGAGCCAGTTTGCCGATGGCGGCATCATTGCCTCCAAACCCTATGTCTCCAGCGGTGCCTACATCGA
CAGAATGTCCAATTATTGCGGAAGTTGCGCCTATAAGGTGAAGCAAAAAACGGGCGAGGGCGCCTGTCCGTTCAACCTGC
TGTACTGGGATTTCCTGAACCGCCACCGGGCACGGTTTGAGGGCAACCCGCGCATGGGCAACATGTATCGCACCTGGGAC
CGGATGGACGAAGAGAAACGCGATGTGATTTTGCAGGAAGCGAGCGCGTTCCTCGCAAAACTTGACGCGGGCGAAAGAGT
TTAG

Upstream 100 bases:

>100_bases
AGCGATGGCGGGTGCTGGGCAAGGTGGCGGAGCTGAAAATTTCCAAGAACTTTCTGACTGCGGGTGGATTTTCCCGCCCA
CTGCGCCAGTTAGCACGATT

Downstream 100 bases:

>100_bases
AGCCCGGCGTTCATCCAATACCTGCGCCATCTTTCTTCGGTTTGTGGTGAAAGCTCCGCATCAGGCAATGCCTCAGGCGC
AAGCTTCGAGAGGTCCTTGA

Product: deoxyribodipyrimidine photolyase-related protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTRLVLVLGDQLSEGLSALKAADPAHDVVVMAEVMDEGTYVPHHPKKIALVLAAMRKFAQRLEGQGWRVAYRRLDEDGAE
SIVGELLRRAEEFGASEVLATTPGEWRLIHALKYAPLKVHFHADDRFLATREDFTEWAEGKKQLRMEYFYRLMRKKTGLL
MEGDTPVGGKWNYDSENRKAPPKIIDHKGPPRFEPDAEVEEVLDLVEARFGTHFGDLRPFWFATTREEAQEALAHFITHA
LPQFGDYQDAMMTDERWLYHSILSPYLNIGLLTPLEICEAAEVAHQDGHAPLNAVEGFIRQILGWREYVRGIYFLEGEDY
PTRNALEQTRALPALYWGAETDMHCLSQAVEQTGQEAYAHHIQRLMVTGNFALLAGVDPAQVHEWYLAVYADAFEWVEAP
NTVGMSQFADGGIIASKPYVSSGAYIDRMSNYCGSCAYKVKQKTGEGACPFNLLYWDFLNRHRARFEGNPRMGNMYRTWD
RMDEEKRDVILQEASAFLAKLDAGERV

Sequences:

>Translated_507_residues
MTRLVLVLGDQLSEGLSALKAADPAHDVVVMAEVMDEGTYVPHHPKKIALVLAAMRKFAQRLEGQGWRVAYRRLDEDGAE
SIVGELLRRAEEFGASEVLATTPGEWRLIHALKYAPLKVHFHADDRFLATREDFTEWAEGKKQLRMEYFYRLMRKKTGLL
MEGDTPVGGKWNYDSENRKAPPKIIDHKGPPRFEPDAEVEEVLDLVEARFGTHFGDLRPFWFATTREEAQEALAHFITHA
LPQFGDYQDAMMTDERWLYHSILSPYLNIGLLTPLEICEAAEVAHQDGHAPLNAVEGFIRQILGWREYVRGIYFLEGEDY
PTRNALEQTRALPALYWGAETDMHCLSQAVEQTGQEAYAHHIQRLMVTGNFALLAGVDPAQVHEWYLAVYADAFEWVEAP
NTVGMSQFADGGIIASKPYVSSGAYIDRMSNYCGSCAYKVKQKTGEGACPFNLLYWDFLNRHRARFEGNPRMGNMYRTWD
RMDEEKRDVILQEASAFLAKLDAGERV
>Mature_506_residues
TRLVLVLGDQLSEGLSALKAADPAHDVVVMAEVMDEGTYVPHHPKKIALVLAAMRKFAQRLEGQGWRVAYRRLDEDGAES
IVGELLRRAEEFGASEVLATTPGEWRLIHALKYAPLKVHFHADDRFLATREDFTEWAEGKKQLRMEYFYRLMRKKTGLLM
EGDTPVGGKWNYDSENRKAPPKIIDHKGPPRFEPDAEVEEVLDLVEARFGTHFGDLRPFWFATTREEAQEALAHFITHAL
PQFGDYQDAMMTDERWLYHSILSPYLNIGLLTPLEICEAAEVAHQDGHAPLNAVEGFIRQILGWREYVRGIYFLEGEDYP
TRNALEQTRALPALYWGAETDMHCLSQAVEQTGQEAYAHHIQRLMVTGNFALLAGVDPAQVHEWYLAVYADAFEWVEAPN
TVGMSQFADGGIIASKPYVSSGAYIDRMSNYCGSCAYKVKQKTGEGACPFNLLYWDFLNRHRARFEGNPRMGNMYRTWDR
MDEEKRDVILQEASAFLAKLDAGERV

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57688; Mature: 57557

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLVLVLGDQLSEGLSALKAADPAHDVVVMAEVMDEGTYVPHHPKKIALVLAAMRKFAQ
CCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RLEGQGWRVAYRRLDEDGAESIVGELLRRAEEFGASEVLATTPGEWRLIHALKYAPLKVH
HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCEEEE
FHADDRFLATREDFTEWAEGKKQLRMEYFYRLMRKKTGLLMEGDTPVGGKWNYDSENRKA
EECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
PPKIIDHKGPPRFEPDAEVEEVLDLVEARFGTHFGDLRPFWFATTREEAQEALAHFITHA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHH
LPQFGDYQDAMMTDERWLYHSILSPYLNIGLLTPLEICEAAEVAHQDGHAPLNAVEGFIR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
QILGWREYVRGIYFLEGEDYPTRNALEQTRALPALYWGAETDMHCLSQAVEQTGQEAYAH
HHHHHHHHHCEEEEECCCCCCCHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHH
HIQRLMVTGNFALLAGVDPAQVHEWYLAVYADAFEWVEAPNTVGMSQFADGGIIASKPYV
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEECCCCC
SSGAYIDRMSNYCGSCAYKVKQKTGEGACPFNLLYWDFLNRHRARFEGNPRMGNMYRTWD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
RMDEEKRDVILQEASAFLAKLDAGERV
HCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TRLVLVLGDQLSEGLSALKAADPAHDVVVMAEVMDEGTYVPHHPKKIALVLAAMRKFAQ
CEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RLEGQGWRVAYRRLDEDGAESIVGELLRRAEEFGASEVLATTPGEWRLIHALKYAPLKVH
HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCEEEE
FHADDRFLATREDFTEWAEGKKQLRMEYFYRLMRKKTGLLMEGDTPVGGKWNYDSENRKA
EECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
PPKIIDHKGPPRFEPDAEVEEVLDLVEARFGTHFGDLRPFWFATTREEAQEALAHFITHA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHH
LPQFGDYQDAMMTDERWLYHSILSPYLNIGLLTPLEICEAAEVAHQDGHAPLNAVEGFIR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
QILGWREYVRGIYFLEGEDYPTRNALEQTRALPALYWGAETDMHCLSQAVEQTGQEAYAH
HHHHHHHHHCEEEEECCCCCCCHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHH
HIQRLMVTGNFALLAGVDPAQVHEWYLAVYADAFEWVEAPNTVGMSQFADGGIIASKPYV
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEECCCCC
SSGAYIDRMSNYCGSCAYKVKQKTGEGACPFNLLYWDFLNRHRARFEGNPRMGNMYRTWD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
RMDEEKRDVILQEASAFLAKLDAGERV
HCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA