Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082102

Identifier: 99082102

GI number: 99082102

Start: 2377716

End: 2378129

Strand: Direct

Name: 99082102

Synonym: TM1040_2262

Alternate gene names: NA

Gene position: 2377716-2378129 (Clockwise)

Preceding gene: 99082101

Following gene: 99082103

Centisome position: 74.28

GC content: 60.14

Gene sequence:

>414_bases
ATGCGGATGATGGTGACATTTGGCCTTGTGGCCGCGCTGGCGGTGGCGACGCTTGGCACGCCGGCCAAGGCGCAAAAGGA
GCCGATCACCGGCGTCATTGGAGCCCAGATCGAGGCCTTCCAAGCCAATGATATGGGGACCGCCTTTGGGTTTGCCTCGC
CCAATATTCGCGCGCTGTTTGGCACGCCGGAACGGTTCGCCACCATGGTCGAACAGGGCTATCCGATGGTCTGGCGTCCG
GCAGATGTGCGCTACCTCGAACTGCGCGAGGTGGCCGGAAATCTCTGGCAACGCGTCATGGTGACCGATGCCGATGGCGA
TATCCACATGCTCGACTATCAGATGATTGAGACTGAAGCAGGTTGGAAAATCAACGCTGTACAGCTGATCAAGGCCCCGG
GCGCCAACGTCTGA

Upstream 100 bases:

>100_bases
TCCCTGCTGCGCTTGCCTCCACACCCTCCCCGTTTTTTGACCGAATACGCCGACACGCTATCTCATCTCGTATCGGGTGT
TGGTACGGAGGAGTTTTGTG

Downstream 100 bases:

>100_bases
AACGGCCAAGACCCCGCCGGGTGTTGCGCGGGCTGCGTACGCCCTCCTGAGCGGGATTTAAGACCGGACTGCTAGAACCT
TTCCTCACTCCCGACGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MRMMVTFGLVAALAVATLGTPAKAQKEPITGVIGAQIEAFQANDMGTAFGFASPNIRALFGTPERFATMVEQGYPMVWRP
ADVRYLELREVAGNLWQRVMVTDADGDIHMLDYQMIETEAGWKINAVQLIKAPGANV

Sequences:

>Translated_137_residues
MRMMVTFGLVAALAVATLGTPAKAQKEPITGVIGAQIEAFQANDMGTAFGFASPNIRALFGTPERFATMVEQGYPMVWRP
ADVRYLELREVAGNLWQRVMVTDADGDIHMLDYQMIETEAGWKINAVQLIKAPGANV
>Mature_137_residues
MRMMVTFGLVAALAVATLGTPAKAQKEPITGVIGAQIEAFQANDMGTAFGFASPNIRALFGTPERFATMVEQGYPMVWRP
ADVRYLELREVAGNLWQRVMVTDADGDIHMLDYQMIETEAGWKINAVQLIKAPGANV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14961; Mature: 14961

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMMVTFGLVAALAVATLGTPAKAQKEPITGVIGAQIEAFQANDMGTAFGFASPNIRALF
CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEEEECCCCCCEEECCCCCEEEEE
GTPERFATMVEQGYPMVWRPADVRYLELREVAGNLWQRVMVTDADGDIHMLDYQMIETEA
CCHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHEEEEECCCCCEEEEEEEEEECCC
GWKINAVQLIKAPGANV
CCEEEEEEEEECCCCCC
>Mature Secondary Structure
MRMMVTFGLVAALAVATLGTPAKAQKEPITGVIGAQIEAFQANDMGTAFGFASPNIRALF
CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEEEECCCCCCEEECCCCCEEEEE
GTPERFATMVEQGYPMVWRPADVRYLELREVAGNLWQRVMVTDADGDIHMLDYQMIETEA
CCHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHEEEEECCCCCEEEEEEEEEECCC
GWKINAVQLIKAPGANV
CCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA