Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082096

Identifier: 99082096

GI number: 99082096

Start: 2371759

End: 2372181

Strand: Direct

Name: 99082096

Synonym: TM1040_2256

Alternate gene names: NA

Gene position: 2371759-2372181 (Clockwise)

Preceding gene: 99082093

Following gene: 99082097

Centisome position: 74.1

GC content: 60.52

Gene sequence:

>423_bases
GTGCGCGACGCAGGAGCAATCGCTGCAATGCGCAGGCTTTGGGGCCGCCTCTGCCTGCAACATGACCGCAGCCCGACCAG
CGCAAAAAATTGCGGCCGTGGGGTGGACCATATTCTTACCACATTTATCTTTAATCTTACGATCAAGCAGTCCGCAGCGG
CGCGCGTCAGGGCTGCGCCACTCAGAAAGAGACAACAGGAGACCATTATGATCGTGGCAGCACTCATACTCGGGGTCATT
GGCGGCAGCGTCAGCGCCGTGAGCGCCGGAGTGTTTTTCGGGGCAAGCCTTTTGCTCTGCAGCGCGGTCTACGTTGGCTC
TGGACTTCTCGTAAGCGTCATGACCCTCTTTGTGGGCGTGATCCTGCAGTCTCGCCGCCAGAGCGACACCCCCTCCGAAG
AGCGCGCGGTCGCACACGCCTGA

Upstream 100 bases:

>100_bases
GGTAGGTCTTGGAGACACCCTGCATGTGGTAGACGTATTGGTAGGAGGCCATGGGATTGCTCCGTCATTAGGGGAAAGAG
TTTGGCCGCTGTGATAGCGC

Downstream 100 bases:

>100_bases
CCCCTCTTATAACCAGACCCAAGGCGGCGATCGGGCCACTGCGAGCCTTTCTTTGCGCGCTTTCCTTCATGAAGGGACTC
TCCGGCCGGTTCCGGCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAPLRKRQQETIMIVAALILGVI
GGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGVILQSRRQSDTPSEERAVAHA

Sequences:

>Translated_140_residues
MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAPLRKRQQETIMIVAALILGVI
GGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGVILQSRRQSDTPSEERAVAHA
>Mature_140_residues
MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAPLRKRQQETIMIVAALILGVI
GGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGVILQSRRQSDTPSEERAVAHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14879; Mature: 14879

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAP
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKRQQETIMIVAALILGVIGGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILQSRRQSDTPSEERAVAHA
HHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure
MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAP
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKRQQETIMIVAALILGVIGGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILQSRRQSDTPSEERAVAHA
HHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA