| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082096
Identifier: 99082096
GI number: 99082096
Start: 2371759
End: 2372181
Strand: Direct
Name: 99082096
Synonym: TM1040_2256
Alternate gene names: NA
Gene position: 2371759-2372181 (Clockwise)
Preceding gene: 99082093
Following gene: 99082097
Centisome position: 74.1
GC content: 60.52
Gene sequence:
>423_bases GTGCGCGACGCAGGAGCAATCGCTGCAATGCGCAGGCTTTGGGGCCGCCTCTGCCTGCAACATGACCGCAGCCCGACCAG CGCAAAAAATTGCGGCCGTGGGGTGGACCATATTCTTACCACATTTATCTTTAATCTTACGATCAAGCAGTCCGCAGCGG CGCGCGTCAGGGCTGCGCCACTCAGAAAGAGACAACAGGAGACCATTATGATCGTGGCAGCACTCATACTCGGGGTCATT GGCGGCAGCGTCAGCGCCGTGAGCGCCGGAGTGTTTTTCGGGGCAAGCCTTTTGCTCTGCAGCGCGGTCTACGTTGGCTC TGGACTTCTCGTAAGCGTCATGACCCTCTTTGTGGGCGTGATCCTGCAGTCTCGCCGCCAGAGCGACACCCCCTCCGAAG AGCGCGCGGTCGCACACGCCTGA
Upstream 100 bases:
>100_bases GGTAGGTCTTGGAGACACCCTGCATGTGGTAGACGTATTGGTAGGAGGCCATGGGATTGCTCCGTCATTAGGGGAAAGAG TTTGGCCGCTGTGATAGCGC
Downstream 100 bases:
>100_bases CCCCTCTTATAACCAGACCCAAGGCGGCGATCGGGCCACTGCGAGCCTTTCTTTGCGCGCTTTCCTTCATGAAGGGACTC TCCGGCCGGTTCCGGCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAPLRKRQQETIMIVAALILGVI GGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGVILQSRRQSDTPSEERAVAHA
Sequences:
>Translated_140_residues MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAPLRKRQQETIMIVAALILGVI GGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGVILQSRRQSDTPSEERAVAHA >Mature_140_residues MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAPLRKRQQETIMIVAALILGVI GGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGVILQSRRQSDTPSEERAVAHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14879; Mature: 14879
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAP CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRKRQQETIMIVAALILGVIGGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ILQSRRQSDTPSEERAVAHA HHHHHCCCCCCHHHHHCCCC >Mature Secondary Structure MRDAGAIAAMRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAAARVRAAP CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRKRQQETIMIVAALILGVIGGSVSAVSAGVFFGASLLLCSAVYVGSGLLVSVMTLFVGV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ILQSRRQSDTPSEERAVAHA HHHHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA