Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082062

Identifier: 99082062

GI number: 99082062

Start: 2333650

End: 2334423

Strand: Direct

Name: 99082062

Synonym: TM1040_2222

Alternate gene names: NA

Gene position: 2333650-2334423 (Clockwise)

Preceding gene: 99082061

Following gene: 99082063

Centisome position: 72.91

GC content: 62.14

Gene sequence:

>774_bases
ATGTGCAGGCCTCCACCCTGCATGATGCTGCGCATGATGTGCGCCACGCGACCGGCTTCCCCTGCCACTAAGCAGATGTT
CGCACGCATTTTGACCAGCGCGTTGTTCGCTGGTGCTGCAGCGGGGCTGATTGCCGCCCTTCTGCAGCTTTTCTTCGTGC
AGCCGGTGCTTTTGCATGCCGAACTCTATGAATCGGGCGCGCTTGTGCATTTCGGCGGCGAGACCGTATCCGCCCATCCC
GAATTGCCGGGCATCTTTGACGAGCCGATGCGCAATTTGCTCAGCATCCTCTTCACCATGCTGATTTACACTGGCTACGC
GCTGATCCTGGTGGCCTTGATGTCGGTTGCGGAGCGGCAAGGCCATGAAATCCGCACCGGACAGGGCTTGCTGTGGGGAT
TGGCAGGCTTTGTGGCGCTTCACTTTGCGCCCGGTTTTTCGCTCGCACCAGAAGTGCCCGGCGTTGCCGCCGCCGATGTG
GGCGCCCGTCAGATCTGGTGGGCCGCCACAGTGGCGAGCGCAGGTGTTGCCATGTGGCTGATCGCTTTTGGCGGTAATCT
GGTGGCCTATGTGGTGGCCGCGCTCTTGTTGATGGCGCCGCATGTGATCGGCGCGCCGGAGCCCGAGACCTTTGCAGGTC
CGGTGCCAACCGAGATCGGCGCCCTTTTTGCGGCGCGCGCCTTGGGGATCGGCATGGCGGCATGGGCATTGCTCGGCGTG
TTCTGTGCCTATTTCTGGCAGACCGAAGCCGCACATGCGGATGCCAACACTTAG

Upstream 100 bases:

>100_bases
ATGACGACCAAGACGCTCAACACGACCGCTTCTGCCAGCCAGATCATCCCGGTTCTTTTCGCCGTGGTACTGGGTCTGGG
GATCATCACCGTGACCGGCC

Downstream 100 bases:

>100_bases
GCGGCTCTCCAGGCTGTCCCCGCTGCGTCATTGCATGCAGCGGGGACAGCCTGCGAGACTGCGCTGCAGCCTCAAATACG
TTTACTTTCCGGAGAATGAC

Product: cobalt transporter subunit CbtA, putative

Products: NA

Alternate protein names: Integral Membrane Protein; Cobalt Transporter Subunit

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MCRPPPCMMLRMMCATRPASPATKQMFARILTSALFAGAAAGLIAALLQLFFVQPVLLHAELYESGALVHFGGETVSAHP
ELPGIFDEPMRNLLSILFTMLIYTGYALILVALMSVAERQGHEIRTGQGLLWGLAGFVALHFAPGFSLAPEVPGVAAADV
GARQIWWAATVASAGVAMWLIAFGGNLVAYVVAALLLMAPHVIGAPEPETFAGPVPTEIGALFAARALGIGMAAWALLGV
FCAYFWQTEAAHADANT

Sequences:

>Translated_257_residues
MCRPPPCMMLRMMCATRPASPATKQMFARILTSALFAGAAAGLIAALLQLFFVQPVLLHAELYESGALVHFGGETVSAHP
ELPGIFDEPMRNLLSILFTMLIYTGYALILVALMSVAERQGHEIRTGQGLLWGLAGFVALHFAPGFSLAPEVPGVAAADV
GARQIWWAATVASAGVAMWLIAFGGNLVAYVVAALLLMAPHVIGAPEPETFAGPVPTEIGALFAARALGIGMAAWALLGV
FCAYFWQTEAAHADANT
>Mature_257_residues
MCRPPPCMMLRMMCATRPASPATKQMFARILTSALFAGAAAGLIAALLQLFFVQPVLLHAELYESGALVHFGGETVSAHP
ELPGIFDEPMRNLLSILFTMLIYTGYALILVALMSVAERQGHEIRTGQGLLWGLAGFVALHFAPGFSLAPEVPGVAAADV
GARQIWWAATVASAGVAMWLIAFGGNLVAYVVAALLLMAPHVIGAPEPETFAGPVPTEIGALFAARALGIGMAAWALLGV
FCAYFWQTEAAHADANT

Specific function: Unknown

COG id: COG5446

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27063; Mature: 27063

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRPPPCMMLRMMCATRPASPATKQMFARILTSALFAGAAAGLIAALLQLFFVQPVLLHA
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELYESGALVHFGGETVSAHPELPGIFDEPMRNLLSILFTMLIYTGYALILVALMSVAERQ
HHHHCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHEIRTGQGLLWGLAGFVALHFAPGFSLAPEVPGVAAADVGARQIWWAATVASAGVAMWL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
IAFGGNLVAYVVAALLLMAPHVIGAPEPETFAGPVPTEIGALFAARALGIGMAAWALLGV
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FCAYFWQTEAAHADANT
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MCRPPPCMMLRMMCATRPASPATKQMFARILTSALFAGAAAGLIAALLQLFFVQPVLLHA
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELYESGALVHFGGETVSAHPELPGIFDEPMRNLLSILFTMLIYTGYALILVALMSVAERQ
HHHHCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHEIRTGQGLLWGLAGFVALHFAPGFSLAPEVPGVAAADVGARQIWWAATVASAGVAMWL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
IAFGGNLVAYVVAALLLMAPHVIGAPEPETFAGPVPTEIGALFAARALGIGMAAWALLGV
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FCAYFWQTEAAHADANT
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA