| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is tas [H]
Identifier: 99082030
GI number: 99082030
Start: 2299874
End: 2300920
Strand: Reverse
Name: tas [H]
Synonym: TM1040_2190
Alternate gene names: 99082030
Gene position: 2300920-2299874 (Counterclockwise)
Preceding gene: 99082032
Following gene: 99082028
Centisome position: 71.88
GC content: 59.31
Gene sequence:
>1047_bases ATGAAGAAGAACCGGCTTGGCCGCACAGATATGATGGTGACCGATCTGTGCCTTGGGACCATGACCTATGGCACTCAGAC CGATGAAGCGGATGCGCATGCGCAGATCGACATGGCGCTGGAAGCGGGGATCAACTTCCTCGATACCGCTGAGATGTATC CAGTGAACCCCATTCGGGCGGAGACCCTTGGTCTGAGCGAAGAGATCATCGGCAACTGGAACCAAAAGACCGGCCGCCGG AAGGACTATATCCTTGCGACAAAACACTCAGGCGAGGGCTCCGTGGCGCGCGACGGGGCGCCGATCACAGGCAAAACCAT TGCGGCGACCGTTGAGGCATCGTTGAAGCGGCTCAAGACCGACTACATCGACCTTTATCAGTTTCACTGGCCAAACCGCG GCAGCTACATGTTCCGCAAGAACTGGAGTTATGATCCGACCGCTTCTTCTTATAATCGCGCGCAGGTGATCGCGGATATG GAAGAATGCCTCGCCGCGTTGCAGGCGCAAGTCGAAAAGGGCAACATCCGCGCCTTTGGGCTTTCCAATGAAAGCGCCTG GGGCACTGCGCAATGGCTGCGTCTGGCGGAAGAGGGCAAGGGCCCGCGGGTTGCCTCGATCCAGAACGAATACTCTTTGC TGTGCAGGCTTTATGACACGGACCTGGCAGAGCTGAGCCACTATGAGGATGTTGGCTTGCTGTCGTTCTCTCCTTTGGGG GCCGGGTATCTCACCGGGAAATATCAAGAGGGTGCGGTGCCGGAAAAGTCGCGCAAGTCGATCAACCCGGAGATGGGCGG GCGGCAGTCTGATCGGGTAGAGGCGGCCGTCGCGGCCTACCTGACGATCGCGGCCGATCATGGGCTGGATCCGGTGCATA TGGCGCTGGGGTGGTGCCGGACACGGCCGTTTATGGCTTCGGCGATCTTTGGTGCGACCGATGTGGCGCAGCTCGCGCAT ATCCTTGAAGGTGCGGATCTTGAACTGGCGCCCGAAGTTCTGGCTCAGATCGATCAGGCCCATCGCGCCCATGCGATGCC GTACTGA
Upstream 100 bases:
>100_bases AAAGGGTGGGCAACGCGCCCCAGGAGCGCCGTTCAATGACTTGCATCCGCTCCCCGGCGGGCTAGGGTCCGCGAGGAACA GAACATCAGGAGAGCGCGAG
Downstream 100 bases:
>100_bases GGCCAACGGAGGGGGCGCTGCCCCCTCTTGCCCTGATCGGGCAATTCACCCCCGGGATATTTGTGAGAAGATGAAGGGCT AGTTGGTGCTGTGGCTGGCG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKKNRLGRTDMMVTDLCLGTMTYGTQTDEADAHAQIDMALEAGINFLDTAEMYPVNPIRAETLGLSEEIIGNWNQKTGRR KDYILATKHSGEGSVARDGAPITGKTIAATVEASLKRLKTDYIDLYQFHWPNRGSYMFRKNWSYDPTASSYNRAQVIADM EECLAALQAQVEKGNIRAFGLSNESAWGTAQWLRLAEEGKGPRVASIQNEYSLLCRLYDTDLAELSHYEDVGLLSFSPLG AGYLTGKYQEGAVPEKSRKSINPEMGGRQSDRVEAAVAAYLTIAADHGLDPVHMALGWCRTRPFMASAIFGATDVAQLAH ILEGADLELAPEVLAQIDQAHRAHAMPY
Sequences:
>Translated_348_residues MKKNRLGRTDMMVTDLCLGTMTYGTQTDEADAHAQIDMALEAGINFLDTAEMYPVNPIRAETLGLSEEIIGNWNQKTGRR KDYILATKHSGEGSVARDGAPITGKTIAATVEASLKRLKTDYIDLYQFHWPNRGSYMFRKNWSYDPTASSYNRAQVIADM EECLAALQAQVEKGNIRAFGLSNESAWGTAQWLRLAEEGKGPRVASIQNEYSLLCRLYDTDLAELSHYEDVGLLSFSPLG AGYLTGKYQEGAVPEKSRKSINPEMGGRQSDRVEAAVAAYLTIAADHGLDPVHMALGWCRTRPFMASAIFGATDVAQLAH ILEGADLELAPEVLAQIDQAHRAHAMPY >Mature_348_residues MKKNRLGRTDMMVTDLCLGTMTYGTQTDEADAHAQIDMALEAGINFLDTAEMYPVNPIRAETLGLSEEIIGNWNQKTGRR KDYILATKHSGEGSVARDGAPITGKTIAATVEASLKRLKTDYIDLYQFHWPNRGSYMFRKNWSYDPTASSYNRAQVIADM EECLAALQAQVEKGNIRAFGLSNESAWGTAQWLRLAEEGKGPRVASIQNEYSLLCRLYDTDLAELSHYEDVGLLSFSPLG AGYLTGKYQEGAVPEKSRKSINPEMGGRQSDRVEAAVAAYLTIAADHGLDPVHMALGWCRTRPFMASAIFGATDVAQLAH ILEGADLELAPEVLAQIDQAHRAHAMPY
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=362, Percent_Identity=26.7955801104972, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI27436971, Length=355, Percent_Identity=27.3239436619718, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI4504825, Length=343, Percent_Identity=25.9475218658892, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI27436966, Length=362, Percent_Identity=27.0718232044199, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI27436969, Length=348, Percent_Identity=25.8620689655172, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI27436962, Length=356, Percent_Identity=26.9662921348315, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI41327764, Length=233, Percent_Identity=27.4678111587983, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1789199, Length=352, Percent_Identity=43.4659090909091, Blast_Score=275, Evalue=4e-75, Organism=Escherichia coli, GI87081735, Length=358, Percent_Identity=29.8882681564246, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI1788070, Length=350, Percent_Identity=26.8571428571429, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789375, Length=356, Percent_Identity=25.8426966292135, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788081, Length=314, Percent_Identity=25.1592356687898, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323998, Length=346, Percent_Identity=22.8323699421965, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=365, Percent_Identity=23.5616438356164, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6319958, Length=324, Percent_Identity=22.2222222222222, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322615, Length=239, Percent_Identity=22.1757322175732, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644950, Length=316, Percent_Identity=24.6835443037975, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38314; Mature: 38314
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNRLGRTDMMVTDLCLGTMTYGTQTDEADAHAQIDMALEAGINFLDTAEMYPVNPIRA CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCH ETLGLSEEIIGNWNQKTGRRKDYILATKHSGEGSVARDGAPITGKTIAATVEASLKRLKT HHCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH DYIDLYQFHWPNRGSYMFRKNWSYDPTASSYNRAQVIADMEECLAALQAQVEKGNIRAFG HHHHHHEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE LSNESAWGTAQWLRLAEEGKGPRVASIQNEYSLLCRLYDTDLAELSHYEDVGLLSFSPLG CCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHCCCCCCCEEECCCC AGYLTGKYQEGAVPEKSRKSINPEMGGRQSDRVEAAVAAYLTIAADHGLDPVHMALGWCR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TRPFMASAIFGATDVAQLAHILEGADLELAPEVLAQIDQAHRAHAMPY CCHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKNRLGRTDMMVTDLCLGTMTYGTQTDEADAHAQIDMALEAGINFLDTAEMYPVNPIRA CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCH ETLGLSEEIIGNWNQKTGRRKDYILATKHSGEGSVARDGAPITGKTIAATVEASLKRLKT HHCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH DYIDLYQFHWPNRGSYMFRKNWSYDPTASSYNRAQVIADMEECLAALQAQVEKGNIRAFG HHHHHHEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE LSNESAWGTAQWLRLAEEGKGPRVASIQNEYSLLCRLYDTDLAELSHYEDVGLLSFSPLG CCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHCCCCCCCEEECCCC AGYLTGKYQEGAVPEKSRKSINPEMGGRQSDRVEAAVAAYLTIAADHGLDPVHMALGWCR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TRPFMASAIFGATDVAQLAHILEGADLELAPEVLAQIDQAHRAHAMPY CCHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]