Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082028

Identifier: 99082028

GI number: 99082028

Start: 2297712

End: 2298629

Strand: Reverse

Name: 99082028

Synonym: TM1040_2188

Alternate gene names: NA

Gene position: 2298629-2297712 (Counterclockwise)

Preceding gene: 99082030

Following gene: 99082027

Centisome position: 71.81

GC content: 61.11

Gene sequence:

>918_bases
ATGCCGCTTTCCATGAACCGAGAGGTCTTTATCACCTGTGCAGTGACCGGCTCTGGGGGAACGCAGGATCGCAGCCCGCA
TGTGCCTCGTTCGCCCAAGGAAATTGCAGAAAGCGCGATTGCCGCCGCCAAGGCAGGGGCCGCGATTGTGCATTGTCATG
TGCGCGACCCAGAAACCGGCGCGCCCTCGCGGGATCTTGGTCTTTATCGCGAGGTCACCGACCGCATCCGCGAGAGCGAT
ACCGATGTGGTGTTGAATCTCACTGCGGGCATGGGGGGCGATATCGTCTTTGGCGGGGTCGAGCGCCCGCTGCCCGTGAC
CGAAGACGGCACCGACATGATCGGCGCAAGCGCGCGTGTGGCGCATGTGGCGGAATGCCTGCCGGAGATCTGCACGTTGG
ATTGCGGCACCATGAATTTTGCCGAGGCCGACTATGTGATGACCAACACGCCCGGCATGTTGCAGGCGATGGGGCAGATG
ATGACGGATCTTGGCGTGAAGCCCGAGATCGAAGCCTTTGACACCGGGCATCTTTGGTATGCCAAGCAACTGGTCAAAGA
CGGCGTGCTGAAATCGGATGCTCTGGTGCAGCTCTGCATGGGGGTCCCATGGGGGGCGCCCAATGATCTCAATACTTTTA
TGGCGATGGTCAACAATGTGCCCGACGACTGGAACTGGTCGGCGTTCTCGCTGGGGCGTGATCAGATGGCTTATGTGGCG
GCCTCAGTGCTGGCAGGCGGCAATGTGCGCGTGGGGCTGGAGGATAACCTCTATCTCGACAAGGGCGTGCTGGCCGAAAA
CTGGCAACTGGTGGAGCGCGCTGGCACCATCGTGTCCAACCTTGGCGCGCGTGTGATCACGCCGGCAGAAGTGCGCGAGA
AGCTTGGCCTGCAGAAACGCGCCCCGATCACCAAGTAA

Upstream 100 bases:

>100_bases
CAAGGCTGAGCCAGACTGCAGATCAGCGCAAATTGGAATCCGGGGAGAAGCCTGGGGATAACCCGGGGCACAACCCTGTA
CATCAGAGGGAAAACACAAA

Downstream 100 bases:

>100_bases
TCGGGAACGAAAGCCGGGGGCAGGGGTTAGAGTTGAAAGATATTTTGCCCCCGGAGGTCCGTATCATGATTGCAGTTGCT
TTTCGCTCCACACTCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MPLSMNREVFITCAVTGSGGTQDRSPHVPRSPKEIAESAIAAAKAGAAIVHCHVRDPETGAPSRDLGLYREVTDRIRESD
TDVVLNLTAGMGGDIVFGGVERPLPVTEDGTDMIGASARVAHVAECLPEICTLDCGTMNFAEADYVMTNTPGMLQAMGQM
MTDLGVKPEIEAFDTGHLWYAKQLVKDGVLKSDALVQLCMGVPWGAPNDLNTFMAMVNNVPDDWNWSAFSLGRDQMAYVA
ASVLAGGNVRVGLEDNLYLDKGVLAENWQLVERAGTIVSNLGARVITPAEVREKLGLQKRAPITK

Sequences:

>Translated_305_residues
MPLSMNREVFITCAVTGSGGTQDRSPHVPRSPKEIAESAIAAAKAGAAIVHCHVRDPETGAPSRDLGLYREVTDRIRESD
TDVVLNLTAGMGGDIVFGGVERPLPVTEDGTDMIGASARVAHVAECLPEICTLDCGTMNFAEADYVMTNTPGMLQAMGQM
MTDLGVKPEIEAFDTGHLWYAKQLVKDGVLKSDALVQLCMGVPWGAPNDLNTFMAMVNNVPDDWNWSAFSLGRDQMAYVA
ASVLAGGNVRVGLEDNLYLDKGVLAENWQLVERAGTIVSNLGARVITPAEVREKLGLQKRAPITK
>Mature_304_residues
PLSMNREVFITCAVTGSGGTQDRSPHVPRSPKEIAESAIAAAKAGAAIVHCHVRDPETGAPSRDLGLYREVTDRIRESDT
DVVLNLTAGMGGDIVFGGVERPLPVTEDGTDMIGASARVAHVAECLPEICTLDCGTMNFAEADYVMTNTPGMLQAMGQMM
TDLGVKPEIEAFDTGHLWYAKQLVKDGVLKSDALVQLCMGVPWGAPNDLNTFMAMVNNVPDDWNWSAFSLGRDQMAYVAA
SVLAGGNVRVGLEDNLYLDKGVLAENWQLVERAGTIVSNLGARVITPAEVREKLGLQKRAPITK

Specific function: Unknown

COG id: COG3246

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32701; Mature: 32570

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSMNREVFITCAVTGSGGTQDRSPHVPRSPKEIAESAIAAAKAGAAIVHCHVRDPETG
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
APSRDLGLYREVTDRIRESDTDVVLNLTAGMGGDIVFGGVERPLPVTEDGTDMIGASARV
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHCCHHHH
AHVAECLPEICTLDCGTMNFAEADYVMTNTPGMLQAMGQMMTDLGVKPEIEAFDTGHLWY
HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCEECCCHHHH
AKQLVKDGVLKSDALVQLCMGVPWGAPNDLNTFMAMVNNVPDDWNWSAFSLGRDQMAYVA
HHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHH
ASVLAGGNVRVGLEDNLYLDKGVLAENWQLVERAGTIVSNLGARVITPAEVREKLGLQKR
HHHHCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCC
APITK
CCCCC
>Mature Secondary Structure 
PLSMNREVFITCAVTGSGGTQDRSPHVPRSPKEIAESAIAAAKAGAAIVHCHVRDPETG
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
APSRDLGLYREVTDRIRESDTDVVLNLTAGMGGDIVFGGVERPLPVTEDGTDMIGASARV
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHCCHHHH
AHVAECLPEICTLDCGTMNFAEADYVMTNTPGMLQAMGQMMTDLGVKPEIEAFDTGHLWY
HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCEECCCHHHH
AKQLVKDGVLKSDALVQLCMGVPWGAPNDLNTFMAMVNNVPDDWNWSAFSLGRDQMAYVA
HHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHH
ASVLAGGNVRVGLEDNLYLDKGVLAENWQLVERAGTIVSNLGARVITPAEVREKLGLQKR
HHHHCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCC
APITK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA