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The map label for this gene is glxA [H]

Identifier: 99082029

GI number: 99082029

Start: 2298764

End: 2299795

Strand: Direct

Name: glxA [H]

Synonym: TM1040_2189

Alternate gene names: 99082029

Gene position: 2298764-2299795 (Clockwise)

Preceding gene: 99082024

Following gene: 99082031

Centisome position: 71.82

GC content: 63.47

Gene sequence:

>1032_bases
ATGAAATCCGCAAAAAACATCCTCCAGCCGGAGAACCGCCCCCTCAAGACCGCCGTTCTGGTGATGGATGAGTGTAACAC
ATTGTCCTTTGCCGCAGCAGTCGACCCCATGCGCGCCGCCAATCGGCTGGCGGGGCGGGCGGCTTTTGACTGGGACTATG
TCAGCGCCTCAGCCGAGCCGCCGATGCTCACCTCAGGCCTCACCGTGCCGACCACGCCGCTGGCGCGGCTGGATGACTGT
GACCTCTTGATTGTCGTTGCCGGCTTTCAACTGGCACGCCATGCCACACCAAGCCTTCTGGCCGGTCTGCGCCGCATTGC
GGGCAGTGGCGCCACCATCGCCGGGATCGACGGTGGCCCCTGGCTCATGGCCGAAGCCGGGCTGCTGGACGGCCATGCGG
CAACGACCCATTGGGAAGATTTGGAGAATTTCTCGGCCCGCTTCCCCGATATTCACTGTCGCACGGATCGCTTTACCGTC
TCTGAGGGGCGCATGACTTCAGGCGGGGCGACGCCGGCAATCGAGATGATGTTGCATATCATCGGCGCGCGTCACGGGCA
TGGCTTTGCCTCACGAGTGGCAGGTCTCTTCCTTTATGACGGCACCGCCTCGCCCCAGCGCAGCCAGAGCCGCCTTGGTC
ATCACAAGCACAACGCCCTCACCGCGAAGGCCAACGCCATAATGGAAGCCGCGCTGGATGACCCCAAACCGCTGGCGGAA
ATCGCCGAGGTGCTCGGCACCAGCCCCCGCAGCCTGCAACAGCAATTCCGCCTGCGCCTCAACACAACGCCACAGGATCA
CTATCTGCAACTGCGTCTGGCAGAGGCTCGCCGACTGGTCACAGACACCAATCTGCCCTTGATGGAAATCGCGGTGGCGA
CGGGGTTCACGTCGCAATCCACCTTTGCGCGCGCCTTTCGCACCGCGCATGGGCTCTCGGCGCGAGAGCTACGCCAGAAC
AGCGCCGAGACCGCGTTTGCAAGCTACCCTGTGCTCAAGGCAACCAGCCACGCCAGCCACAGCACCAACTAG

Upstream 100 bases:

>100_bases
CCGGGTTATCCCCAGGCTTCTCCCCGGATTCCAATTTGCGCTGATCTGCAGTCTGGCTCAGCCTTGGCAGCAAGAGTTGA
CGCGAAGCGAATCGAAGTTG

Downstream 100 bases:

>100_bases
CCCTTCATCTTCTCACAAATATCCCGGGGGTGAATTGCCCGATCAGGGCAAGAGGGGGCAGCGCCCCCTCCGTTGGCCTC
AGTACGGCATCGCATGGGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKSAKNILQPENRPLKTAVLVMDECNTLSFAAAVDPMRAANRLAGRAAFDWDYVSASAEPPMLTSGLTVPTTPLARLDDC
DLLIVVAGFQLARHATPSLLAGLRRIAGSGATIAGIDGGPWLMAEAGLLDGHAATTHWEDLENFSARFPDIHCRTDRFTV
SEGRMTSGGATPAIEMMLHIIGARHGHGFASRVAGLFLYDGTASPQRSQSRLGHHKHNALTAKANAIMEAALDDPKPLAE
IAEVLGTSPRSLQQQFRLRLNTTPQDHYLQLRLAEARRLVTDTNLPLMEIAVATGFTSQSTFARAFRTAHGLSARELRQN
SAETAFASYPVLKATSHASHSTN

Sequences:

>Translated_343_residues
MKSAKNILQPENRPLKTAVLVMDECNTLSFAAAVDPMRAANRLAGRAAFDWDYVSASAEPPMLTSGLTVPTTPLARLDDC
DLLIVVAGFQLARHATPSLLAGLRRIAGSGATIAGIDGGPWLMAEAGLLDGHAATTHWEDLENFSARFPDIHCRTDRFTV
SEGRMTSGGATPAIEMMLHIIGARHGHGFASRVAGLFLYDGTASPQRSQSRLGHHKHNALTAKANAIMEAALDDPKPLAE
IAEVLGTSPRSLQQQFRLRLNTTPQDHYLQLRLAEARRLVTDTNLPLMEIAVATGFTSQSTFARAFRTAHGLSARELRQN
SAETAFASYPVLKATSHASHSTN
>Mature_343_residues
MKSAKNILQPENRPLKTAVLVMDECNTLSFAAAVDPMRAANRLAGRAAFDWDYVSASAEPPMLTSGLTVPTTPLARLDDC
DLLIVVAGFQLARHATPSLLAGLRRIAGSGATIAGIDGGPWLMAEAGLLDGHAATTHWEDLENFSARFPDIHCRTDRFTV
SEGRMTSGGATPAIEMMLHIIGARHGHGFASRVAGLFLYDGTASPQRSQSRLGHHKHNALTAKANAIMEAALDDPKPLAE
IAEVLGTSPRSLQQQFRLRLNTTPQDHYLQLRLAEARRLVTDTNLPLMEIAVATGFTSQSTFARAFRTAHGLSARELRQN
SAETAFASYPVLKATSHASHSTN

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36937; Mature: 36937

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAKNILQPENRPLKTAVLVMDECNTLSFAAAVDPMRAANRLAGRAAFDWDYVSASAEP
CCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHHCHHHHHHHHHCCCCCCCHHCCCCCCC
PMLTSGLTVPTTPLARLDDCDLLIVVAGFQLARHATPSLLAGLRRIAGSGATIAGIDGGP
CEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCC
WLMAEAGLLDGHAATTHWEDLENFSARFPDIHCRTDRFTVSEGRMTSGGATPAIEMMLHI
EEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHHH
IGARHGHGFASRVAGLFLYDGTASPQRSQSRLGHHKHNALTAKANAIMEAALDDPKPLAE
HHCCCCCCHHHHHCEEEEECCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHCCCCCHHHH
IAEVLGTSPRSLQQQFRLRLNTTPQDHYLQLRLAEARRLVTDTNLPLMEIAVATGFTSQS
HHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHCCCCCHH
TFARAFRTAHGLSARELRQNSAETAFASYPVLKATSHASHSTN
HHHHHHHHHCCCCHHHHHHCCHHHHHHCCCHHEECCCCCCCCC
>Mature Secondary Structure
MKSAKNILQPENRPLKTAVLVMDECNTLSFAAAVDPMRAANRLAGRAAFDWDYVSASAEP
CCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHHCHHHHHHHHHCCCCCCCHHCCCCCCC
PMLTSGLTVPTTPLARLDDCDLLIVVAGFQLARHATPSLLAGLRRIAGSGATIAGIDGGP
CEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCC
WLMAEAGLLDGHAATTHWEDLENFSARFPDIHCRTDRFTVSEGRMTSGGATPAIEMMLHI
EEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHHH
IGARHGHGFASRVAGLFLYDGTASPQRSQSRLGHHKHNALTAKANAIMEAALDDPKPLAE
HHCCCCCCHHHHHCEEEEECCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHCCCCCHHHH
IAEVLGTSPRSLQQQFRLRLNTTPQDHYLQLRLAEARRLVTDTNLPLMEIAVATGFTSQS
HHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHCCCCCHH
TFARAFRTAHGLSARELRQNSAETAFASYPVLKATSHASHSTN
HHHHHHHHHCCCCHHHHHHCCHHHHHHCCCHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]