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The map label for this gene is recJ [H]

Identifier: 99082006

GI number: 99082006

Start: 2275574

End: 2277385

Strand: Direct

Name: recJ [H]

Synonym: TM1040_2166

Alternate gene names: 99082006

Gene position: 2275574-2277385 (Clockwise)

Preceding gene: 99082005

Following gene: 99082014

Centisome position: 71.09

GC content: 65.89

Gene sequence:

>1812_bases
TTGGGAAAAGATGAAGGCCGGGTCCCGCGCGGGTCCGGCCTTTTTTACACAGAAGACGAGGGAATAGAGTTGAGCTTTCT
GGGTGTCGAGACCTCACTGACCGGACGCCGCTGGGTGGGACCCGGTGTGGATCAGGCCCGCGCAAGCGAGCATCTGGCGC
AGGAAACCGGGCTACCTCCTGCGGTGTGTCAGGTCCTCGCACGCCGGGGCGTGCCCGCGCATGAGGCCACCGGGTTTCTG
ACGCCGCAGCTCAAGGATCTCTTGCCCGATCCGCGCCGCATGAAGGACATGGAGACCGCAGCAGCGCGCTTTCTGCAAGC
CGTGGAGCGGCGCGAGCGGATTGCGATCTTTGCCGATTATGACGTCGATGGCGGCTCTTCGGCGGCGCTTTTGCTGGTGT
ACCTGCGACAGATGGGCCAGCAGGCGACACTATATATTCCGGATCGCATTGATGAGGGTTATGGCCCCAATGATGCGGCA
ATGGCGGCGCTGGCGCGCGATCATGACCTTATCATCTGCGTGGACTGTGGCACACTTTCGCACGGGCCCATCGCAGCGGC
GAAGGGCGCGGATGTGGTGGTTCTGGATCACCACCTTGGCGGCGAGACCCTGCCCGACTGCGTGGCAGTGGTGAACCCCA
ACCGGCAGGATGAGGACGGCGATCTGGGCTATTTCTGCGCCGCTGGTGTGGTGTTCCTGATGCTCGTCGAGGTGCGCCGT
CAGGCGCGCGACAAGGGGCTTGGCGCAGGCCCTGATCTGATGGCGATGCTCGATCTGGTGGCGCTGGCCACCGTGGCAGA
TGTGGCCCCCCTGATCGGCGCGAACCGCGCGCTGGTGCGCCAAGGCCTGAAGGTGATGGGGCGACGCCAACGTCCGGGTC
TGGTTGCCCTCGCGGATGTGAGCCGGATGGATGCGGCGCCCTCAACCTATCACCTCGGCTTTCTCCTGGGGCCGCGGGTC
AATGCGGGCGGGCGGATCGGCAAGGCGGACCTTGGTGCGCGCCTGCTGTCGACGGATGACCCGCATGAGGCTGCTGCGCT
CTCCGAACGGCTTGACCAGCTCAATACGGAGCGGCGCGACATTGAGAACGCGGTGCGTGCTGCCGCACTGGAACAGGCCG
AGGCGCGCGGCTTTGACGCGCCTTTGGTCTGGGCGGCGGGGGAAGGCTGGCATCCGGGCGTGGTCGGCATCGTCGCCTCG
CGCCTCAAGGAAGCAACGGGCCGACCTGCGGTGGTCATCGGCCTAGACGGCGAAGAGGGCAAAGGATCGGGACGCTCTGT
CTCGGGCATCGACCTTGGGGCCTCGATCCAGAAGGTCGCAATGGAAGGGCTGCTCTTGAAGGGCGGCGGGCACAAGATGG
CTGCGGGCCTCACGGTGGCGCGCGGCCAGCTGGAACCCGCGATGGCCCGCCTTGCAGAGCTCTTGGACAAACAGGGCGCA
GGCGATCTGGGCCCCGCGGATCTGAAGCTCGACGGGATGCTGATGCCCGGCGCCGCCAGCGTGGAGTTGATCGAGCAGAT
CGAACAGGCCGGGCCGTTTGGCGCTGGGGCCCCTGCCCCCCGCTATGGGTTTCCTGACGTCGCCGTACGCTTTGCCAAAC
GGGTTGGAGAATCGCATCTCAAGGTCAGTTTCACCGATGGGATGGGCGGCAATATCGACGCCATCGCCTTTGGCGCCTTT
GACACCAACCTCGGGCCGCGCTTGCTCGAACACGGAGGCGCGCGCTTTCATGTCTCCGGACGGCTAGAGGTCAACACCTG
GGGCGGGCGCCAAAGCGCGCAATTGCGACTGGAGGACGCAGCCGAGGCCTGA

Upstream 100 bases:

>100_bases
CCGGCTCGGTGCGCCGCATGAGCTATCGCACACCTCTGAGCGCGCATCAGTAACCCAGAACAAACCTCAGCGCTTGCAGC
GCGGAGCGGGATTTAGGTAT

Downstream 100 bases:

>100_bases
ACCTCGCTAGAAATGGCGAGGACTTCGCCTGTGGATAAGAATTTTCCGCTGTAGATGTTTTTTTCCCTTGCGACGCCCGC
CGCAAAACCCTAAACACCCG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MGKDEGRVPRGSGLFYTEDEGIELSFLGVETSLTGRRWVGPGVDQARASEHLAQETGLPPAVCQVLARRGVPAHEATGFL
TPQLKDLLPDPRRMKDMETAAARFLQAVERRERIAIFADYDVDGGSSAALLLVYLRQMGQQATLYIPDRIDEGYGPNDAA
MAALARDHDLIICVDCGTLSHGPIAAAKGADVVVLDHHLGGETLPDCVAVVNPNRQDEDGDLGYFCAAGVVFLMLVEVRR
QARDKGLGAGPDLMAMLDLVALATVADVAPLIGANRALVRQGLKVMGRRQRPGLVALADVSRMDAAPSTYHLGFLLGPRV
NAGGRIGKADLGARLLSTDDPHEAAALSERLDQLNTERRDIENAVRAAALEQAEARGFDAPLVWAAGEGWHPGVVGIVAS
RLKEATGRPAVVIGLDGEEGKGSGRSVSGIDLGASIQKVAMEGLLLKGGGHKMAAGLTVARGQLEPAMARLAELLDKQGA
GDLGPADLKLDGMLMPGAASVELIEQIEQAGPFGAGAPAPRYGFPDVAVRFAKRVGESHLKVSFTDGMGGNIDAIAFGAF
DTNLGPRLLEHGGARFHVSGRLEVNTWGGRQSAQLRLEDAAEA

Sequences:

>Translated_603_residues
MGKDEGRVPRGSGLFYTEDEGIELSFLGVETSLTGRRWVGPGVDQARASEHLAQETGLPPAVCQVLARRGVPAHEATGFL
TPQLKDLLPDPRRMKDMETAAARFLQAVERRERIAIFADYDVDGGSSAALLLVYLRQMGQQATLYIPDRIDEGYGPNDAA
MAALARDHDLIICVDCGTLSHGPIAAAKGADVVVLDHHLGGETLPDCVAVVNPNRQDEDGDLGYFCAAGVVFLMLVEVRR
QARDKGLGAGPDLMAMLDLVALATVADVAPLIGANRALVRQGLKVMGRRQRPGLVALADVSRMDAAPSTYHLGFLLGPRV
NAGGRIGKADLGARLLSTDDPHEAAALSERLDQLNTERRDIENAVRAAALEQAEARGFDAPLVWAAGEGWHPGVVGIVAS
RLKEATGRPAVVIGLDGEEGKGSGRSVSGIDLGASIQKVAMEGLLLKGGGHKMAAGLTVARGQLEPAMARLAELLDKQGA
GDLGPADLKLDGMLMPGAASVELIEQIEQAGPFGAGAPAPRYGFPDVAVRFAKRVGESHLKVSFTDGMGGNIDAIAFGAF
DTNLGPRLLEHGGARFHVSGRLEVNTWGGRQSAQLRLEDAAEA
>Mature_602_residues
GKDEGRVPRGSGLFYTEDEGIELSFLGVETSLTGRRWVGPGVDQARASEHLAQETGLPPAVCQVLARRGVPAHEATGFLT
PQLKDLLPDPRRMKDMETAAARFLQAVERRERIAIFADYDVDGGSSAALLLVYLRQMGQQATLYIPDRIDEGYGPNDAAM
AALARDHDLIICVDCGTLSHGPIAAAKGADVVVLDHHLGGETLPDCVAVVNPNRQDEDGDLGYFCAAGVVFLMLVEVRRQ
ARDKGLGAGPDLMAMLDLVALATVADVAPLIGANRALVRQGLKVMGRRQRPGLVALADVSRMDAAPSTYHLGFLLGPRVN
AGGRIGKADLGARLLSTDDPHEAAALSERLDQLNTERRDIENAVRAAALEQAEARGFDAPLVWAAGEGWHPGVVGIVASR
LKEATGRPAVVIGLDGEEGKGSGRSVSGIDLGASIQKVAMEGLLLKGGGHKMAAGLTVARGQLEPAMARLAELLDKQGAG
DLGPADLKLDGMLMPGAASVELIEQIEQAGPFGAGAPAPRYGFPDVAVRFAKRVGESHLKVSFTDGMGGNIDAIAFGAFD
TNLGPRLLEHGGARFHVSGRLEVNTWGGRQSAQLRLEDAAEA

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=564, Percent_Identity=35.2836879432624, Blast_Score=264, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63486; Mature: 63355

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKDEGRVPRGSGLFYTEDEGIELSFLGVETSLTGRRWVGPGVDQARASEHLAQETGLPP
CCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCH
AVCQVLARRGVPAHEATGFLTPQLKDLLPDPRRMKDMETAAARFLQAVERRERIAIFADY
HHHHHHHHCCCCCHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
DVDGGSSAALLLVYLRQMGQQATLYIPDRIDEGYGPNDAAMAALARDHDLIICVDCGTLS
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCC
HGPIAAAKGADVVVLDHHLGGETLPDCVAVVNPNRQDEDGDLGYFCAAGVVFLMLVEVRR
CCCEEECCCCCEEEEECCCCCCCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QARDKGLGAGPDLMAMLDLVALATVADVAPLIGANRALVRQGLKVMGRRQRPGLVALADV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECC
SRMDAAPSTYHLGFLLGPRVNAGGRIGKADLGARLLSTDDPHEAAALSERLDQLNTERRD
HHHCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHH
IENAVRAAALEQAEARGFDAPLVWAAGEGWHPGVVGIVASRLKEATGRPAVVIGLDGEEG
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
KGSGRSVSGIDLGASIQKVAMEGLLLKGGGHKMAAGLTVARGQLEPAMARLAELLDKQGA
CCCCCEECCCCCCHHHHHHHHHCEEEECCCCEEECCEEEECCCCCHHHHHHHHHHHHCCC
GDLGPADLKLDGMLMPGAASVELIEQIEQAGPFGAGAPAPRYGFPDVAVRFAKRVGESHL
CCCCCCCEEECCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
KVSFTDGMGGNIDAIAFGAFDTNLGPRLLEHGGARFHVSGRLEVNTWGGRQSAQLRLEDA
EEEEECCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEEEEEEEEECCCCCCCEEEECCC
AEA
CCC
>Mature Secondary Structure 
GKDEGRVPRGSGLFYTEDEGIELSFLGVETSLTGRRWVGPGVDQARASEHLAQETGLPP
CCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCH
AVCQVLARRGVPAHEATGFLTPQLKDLLPDPRRMKDMETAAARFLQAVERRERIAIFADY
HHHHHHHHCCCCCHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
DVDGGSSAALLLVYLRQMGQQATLYIPDRIDEGYGPNDAAMAALARDHDLIICVDCGTLS
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCC
HGPIAAAKGADVVVLDHHLGGETLPDCVAVVNPNRQDEDGDLGYFCAAGVVFLMLVEVRR
CCCEEECCCCCEEEEECCCCCCCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QARDKGLGAGPDLMAMLDLVALATVADVAPLIGANRALVRQGLKVMGRRQRPGLVALADV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECC
SRMDAAPSTYHLGFLLGPRVNAGGRIGKADLGARLLSTDDPHEAAALSERLDQLNTERRD
HHHCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHH
IENAVRAAALEQAEARGFDAPLVWAAGEGWHPGVVGIVASRLKEATGRPAVVIGLDGEEG
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
KGSGRSVSGIDLGASIQKVAMEGLLLKGGGHKMAAGLTVARGQLEPAMARLAELLDKQGA
CCCCCEECCCCCCHHHHHHHHHCEEEECCCCEEECCEEEECCCCCHHHHHHHHHHHHCCC
GDLGPADLKLDGMLMPGAASVELIEQIEQAGPFGAGAPAPRYGFPDVAVRFAKRVGESHL
CCCCCCCEEECCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
KVSFTDGMGGNIDAIAFGAFDTNLGPRLLEHGGARFHVSGRLEVNTWGGRQSAQLRLEDA
EEEEECCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEEEEEEEEECCCCCCCEEEECCC
AEA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]