| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081994
Identifier: 99081994
GI number: 99081994
Start: 2261944
End: 2262378
Strand: Reverse
Name: 99081994
Synonym: TM1040_2154
Alternate gene names: NA
Gene position: 2262378-2261944 (Counterclockwise)
Preceding gene: 99081995
Following gene: 99081990
Centisome position: 70.68
GC content: 65.75
Gene sequence:
>435_bases ATGACCGAGAATTTGCCAACGATTGCACAGGCCAAAGCCATGGCTAGAGAGTGGCGCGCAGCCCGCCAGCAGGCGGGCGA GAGCCTGCGCCACGGCGCGGCGCTTGAACATGTGGCCCGGCAGCTGGGGTTTCGCGATTGGAACCTATGCGCTGCGATGC TGTCGCAGGCCGAGGCGCAGCGTTACCAGCCCGGGCAGGTGGTCCGGGGGCGCTACCTGTCGCAACCCTTTTCCGCGCGC GTGCTGCGGGCGACCGCGGTAGAGGGGCGCGTGGGCTGGGTCAGGCTGGAGCTGGATCTGGAGGTGCCGGTTGACGTGGT CACATCACAGCGGTTCTCCAGTTTCAGACGCCGGGTCAACGGCGTGATTGGCCCTGAAGGCTTCAGTCGCGAGCAGACCT CTGACGGGCAACCGCATCTGGTGATCGATCCTTAA
Upstream 100 bases:
>100_bases CCGTTGCCGAGGCGGGGCTCCTTGTGCTGACGGGGCTGGTTCTGCTGGACCTTCGTCGCCGGCGTGACCAAGTGACCTCC AAAGTGCAGGAGCGCCGCGC
Downstream 100 bases:
>100_bases TCCCGCGCGGGTCATCCGCGTCCCATCTTTGACAGAGCAGCAAAGGCCGCCGGGCTCAAGCTCCGGCGGCCTTTGCAATT CAAACTCGAACGCTTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTENLPTIAQAKAMAREWRAARQQAGESLRHGAALEHVARQLGFRDWNLCAAMLSQAEAQRYQPGQVVRGRYLSQPFSAR VLRATAVEGRVGWVRLELDLEVPVDVVTSQRFSSFRRRVNGVIGPEGFSREQTSDGQPHLVIDP
Sequences:
>Translated_144_residues MTENLPTIAQAKAMAREWRAARQQAGESLRHGAALEHVARQLGFRDWNLCAAMLSQAEAQRYQPGQVVRGRYLSQPFSAR VLRATAVEGRVGWVRLELDLEVPVDVVTSQRFSSFRRRVNGVIGPEGFSREQTSDGQPHLVIDP >Mature_143_residues TENLPTIAQAKAMAREWRAARQQAGESLRHGAALEHVARQLGFRDWNLCAAMLSQAEAQRYQPGQVVRGRYLSQPFSARV LRATAVEGRVGWVRLELDLEVPVDVVTSQRFSSFRRRVNGVIGPEGFSREQTSDGQPHLVIDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16123; Mature: 15992
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENLPTIAQAKAMAREWRAARQQAGESLRHGAALEHVARQLGFRDWNLCAAMLSQAEAQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH RYQPGQVVRGRYLSQPFSARVLRATAVEGRVGWVRLELDLEVPVDVVTSQRFSSFRRRVN HCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHC GVIGPEGFSREQTSDGQPHLVIDP CCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure TENLPTIAQAKAMAREWRAARQQAGESLRHGAALEHVARQLGFRDWNLCAAMLSQAEAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH RYQPGQVVRGRYLSQPFSARVLRATAVEGRVGWVRLELDLEVPVDVVTSQRFSSFRRRVN HCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHC GVIGPEGFSREQTSDGQPHLVIDP CCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA