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The map label for this gene is lipB [H]

Identifier: 99081972

GI number: 99081972

Start: 2236933

End: 2238237

Strand: Direct

Name: lipB [H]

Synonym: TM1040_2132

Alternate gene names: 99081972

Gene position: 2236933-2238237 (Clockwise)

Preceding gene: 99081964

Following gene: 99081973

Centisome position: 69.88

GC content: 61.61

Gene sequence:

>1305_bases
ATGCCAATGAGATCGAAAAATGGATCAGCTGACGCCCGCAGCTTCCTGTTTCTGCAGGGGCCTCATGGGCCGTTTTTTGC
AGCTCTGGGGCGTATGTTGCGCGCAGCGGGCTGCAGCGTGCACCGGGTTGGGTTCAACACGGGCGACCGCGTGTTCTGGC
CGGACCGGCAAAGCTATATCGCCTATCGCGATACACCAGAGGCCTGGCCGGAAAGGTTTGGCGCGCTCCTGGATCAGCGC
GCGATCACCGATATCGTGCTCTATGGCGACACCCGCCCGATCCATGCGGATGCAATCGCGATCGCAAAGGCACGCGGTAT
CACAGTCCATACGTTCGAAGAAGGCTATCTGCGCCCCTACTGGGTCACCTATGAGCGCGACGGCACCAATGGCAACTCGC
GCCTGATGCAGATGCCGGTCCCTGAGATGGAGCAAGCGCTGGCAAACAGCGACCTCGAAATGCCAATGCCTCCGGCGCAT
TGGGGCGACACACGCCAACATGTGATTTACGGCGCGCTTTATCATTGGTTCGTCATGTTTCTGAACCGGGGCTATCGCAA
CTTCCGCCCCCATCGCGCCCTGCCGGTCACAAAGGAGTTCCAGCTCTATCTCAACCGGCTGCTGATGATGCCCTTGCATG
CCTTGCACCGCCGTCTGGCCACGATGCGCATTCAGCGCGGCGGATTTCCCTATCATCTGGCGCTCTTGCAGCTGGAACAT
GACAGCGCGTTTCAAGCCCATTCGCCTTTTTCGACCATCACCGAATTCCTCGAGGTGGTTGTTGCCGGCTTTGCCGAGGG
CGCGCCGCGCCACCACCACCTTGTCTTCAAGGCGCACCCGCTTGAGGATGGACGCGCCCCGATCCGACGGGCGTTGAAAC
GTCTGGCCGCGGAACATGGCGTCGAGGGGCGCGTGCACTATGTGCGCGGCGGCAAGCTCGCCGCGCTTTTGAATGAGGCG
CGCACCGCCGTCACCGTGAACTCCACGGCAGGCCAACAGGTCTTGTGGCGGGGCTTGCCGCTCAAGGTCTTTGGCCGCGC
GGTTTATGACAAACCGGAATTCTCCTCGACCCAAAGCCTGCCGGAGTTCTTTGCCGCTCCCGCCCGCCCCGATGGGCGCG
CCTACAAGCAATATCGCCGCTATCTTTTGGAAACCTCTCAGTTTCCTGGCGGGTTTTATTCGCGCTCCGGGCGGCGCCAG
CTGTTGCGGCAAGTGGTGGATATGATGCTTGCTGCCGACGATCCCTATGACGCGCTCCTGCGCGGCACAGCAGCGCCACG
GCAACACTTGCGTGTCGTGAGCTGA

Upstream 100 bases:

>100_bases
TCGGCAGATAAAACGAACATTCCGACACGCGACCGAGCGGGCCTCAGGAAGAGAGAAAAACCCTCCGCCCCCGCCGGTGA
GAGCACTGGATCGAGCACCA

Downstream 100 bases:

>100_bases
CCCCAGATGCAAGCGCGACTGGATTTTTGCGTGACAGTCCGCTAATTTGGGCGCAAAACTTGAGGCAAAATAAACATAGG
TCGAGGAGACCGAGCAGTGA

Product: capsule polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MPMRSKNGSADARSFLFLQGPHGPFFAALGRMLRAAGCSVHRVGFNTGDRVFWPDRQSYIAYRDTPEAWPERFGALLDQR
AITDIVLYGDTRPIHADAIAIAKARGITVHTFEEGYLRPYWVTYERDGTNGNSRLMQMPVPEMEQALANSDLEMPMPPAH
WGDTRQHVIYGALYHWFVMFLNRGYRNFRPHRALPVTKEFQLYLNRLLMMPLHALHRRLATMRIQRGGFPYHLALLQLEH
DSAFQAHSPFSTITEFLEVVVAGFAEGAPRHHHLVFKAHPLEDGRAPIRRALKRLAAEHGVEGRVHYVRGGKLAALLNEA
RTAVTVNSTAGQQVLWRGLPLKVFGRAVYDKPEFSSTQSLPEFFAAPARPDGRAYKQYRRYLLETSQFPGGFYSRSGRRQ
LLRQVVDMMLAADDPYDALLRGTAAPRQHLRVVS

Sequences:

>Translated_434_residues
MPMRSKNGSADARSFLFLQGPHGPFFAALGRMLRAAGCSVHRVGFNTGDRVFWPDRQSYIAYRDTPEAWPERFGALLDQR
AITDIVLYGDTRPIHADAIAIAKARGITVHTFEEGYLRPYWVTYERDGTNGNSRLMQMPVPEMEQALANSDLEMPMPPAH
WGDTRQHVIYGALYHWFVMFLNRGYRNFRPHRALPVTKEFQLYLNRLLMMPLHALHRRLATMRIQRGGFPYHLALLQLEH
DSAFQAHSPFSTITEFLEVVVAGFAEGAPRHHHLVFKAHPLEDGRAPIRRALKRLAAEHGVEGRVHYVRGGKLAALLNEA
RTAVTVNSTAGQQVLWRGLPLKVFGRAVYDKPEFSSTQSLPEFFAAPARPDGRAYKQYRRYLLETSQFPGGFYSRSGRRQ
LLRQVVDMMLAADDPYDALLRGTAAPRQHLRVVS
>Mature_433_residues
PMRSKNGSADARSFLFLQGPHGPFFAALGRMLRAAGCSVHRVGFNTGDRVFWPDRQSYIAYRDTPEAWPERFGALLDQRA
ITDIVLYGDTRPIHADAIAIAKARGITVHTFEEGYLRPYWVTYERDGTNGNSRLMQMPVPEMEQALANSDLEMPMPPAHW
GDTRQHVIYGALYHWFVMFLNRGYRNFRPHRALPVTKEFQLYLNRLLMMPLHALHRRLATMRIQRGGFPYHLALLQLEHD
SAFQAHSPFSTITEFLEVVVAGFAEGAPRHHHLVFKAHPLEDGRAPIRRALKRLAAEHGVEGRVHYVRGGKLAALLNEAR
TAVTVNSTAGQQVLWRGLPLKVFGRAVYDKPEFSSTQSLPEFFAAPARPDGRAYKQYRRYLLETSQFPGGFYSRSGRRQL
LRQVVDMMLAADDPYDALLRGTAAPRQHLRVVS

Specific function: Involved in the phospholipid modification of the capsular polysaccharide, a strong requirement for its translocation to the cell surface [H]

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 49356; Mature: 49225

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMRSKNGSADARSFLFLQGPHGPFFAALGRMLRAAGCSVHRVGFNTGDRVFWPDRQSYI
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCEE
AYRDTPEAWPERFGALLDQRAITDIVLYGDTRPIHADAIAIAKARGITVHTFEEGYLRPY
EECCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCEE
WVTYERDGTNGNSRLMQMPVPEMEQALANSDLEMPMPPAHWGDTRQHVIYGALYHWFVMF
EEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LNRGYRNFRPHRALPVTKEFQLYLNRLLMMPLHALHRRLATMRIQRGGFPYHLALLQLEH
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
DSAFQAHSPFSTITEFLEVVVAGFAEGAPRHHHLVFKAHPLEDGRAPIRRALKRLAAEHG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC
VEGRVHYVRGGKLAALLNEARTAVTVNSTAGQQVLWRGLPLKVFGRAVYDKPEFSSTQSL
CCCEEEEEECCHHHHHHHHHHHEEEEECCCCHHHHHCCCCHHHHHHHHCCCCCCCCHHCC
PEFFAAPARPDGRAYKQYRRYLLETSQFPGGFYSRSGRRQLLRQVVDMMLAADDPYDALL
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
RGTAAPRQHLRVVS
HCCCCCHHHHEECC
>Mature Secondary Structure 
PMRSKNGSADARSFLFLQGPHGPFFAALGRMLRAAGCSVHRVGFNTGDRVFWPDRQSYI
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCEE
AYRDTPEAWPERFGALLDQRAITDIVLYGDTRPIHADAIAIAKARGITVHTFEEGYLRPY
EECCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCEE
WVTYERDGTNGNSRLMQMPVPEMEQALANSDLEMPMPPAHWGDTRQHVIYGALYHWFVMF
EEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LNRGYRNFRPHRALPVTKEFQLYLNRLLMMPLHALHRRLATMRIQRGGFPYHLALLQLEH
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
DSAFQAHSPFSTITEFLEVVVAGFAEGAPRHHHLVFKAHPLEDGRAPIRRALKRLAAEHG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC
VEGRVHYVRGGKLAALLNEARTAVTVNSTAGQQVLWRGLPLKVFGRAVYDKPEFSSTQSL
CCCEEEEEECCHHHHHHHHHHHEEEEECCCCHHHHHCCCCHHHHHHHHCCCCCCCCHHCC
PEFFAAPARPDGRAYKQYRRYLLETSQFPGGFYSRSGRRQLLRQVVDMMLAADDPYDALL
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
RGTAAPRQHLRVVS
HCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]