| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is cyaA [H]
Identifier: 99081964
GI number: 99081964
Start: 2228973
End: 2230523
Strand: Direct
Name: cyaA [H]
Synonym: TM1040_2124
Alternate gene names: 99081964
Gene position: 2228973-2230523 (Clockwise)
Preceding gene: 99081961
Following gene: 99081972
Centisome position: 69.63
GC content: 60.99
Gene sequence:
>1551_bases ATGAAGATCACCCGCCGCATCGGCCGTTTTCTGGTCAACCAGCCGCATCTGATCAACTGGGGCATCGGCGCCGCGATTGT TGCCCTGCCCGTGGTGGTCTGGATGGACCTGATGGCGATCACCGATCAATCGCTGCGCCGCCAGGGACAGGCTCTGGACG CGGTCTTGGACACCGTGCGCAGCTATTATGCCCGCAATGTGATTGGCCGCTTGAATCCGGACGGGTCGACCTTTGCCACC CACGACTATCACGACCGTGACGGGGCCATCCCGATCCCCGCGACCATGGCGATCGAGCTCGGCGATCAGATCGGCACCCA TGGTCTGAACGTGCAGTACCGATTTGCCTCGGACTATCCCTTTCATGGCCGCGAGACGACAGAGCTGACCTGGGCGGAGG ATCACGCGCTGAGCCGGTTTCGCGAGGGGGTGGACGATCACTACCTGTTCTACCGGGGCGAAGAATCCGGGCTGCTGACA CATGCAGTAACGATGATCACTCCTGTGGTGATGGAAGAGGCCTGCGTTGCCTGCCACAACAACCACTCCGACAGCCCCAA AACCGATTGGGCGGTTGGCGACATTCGCGGCGTGCAGTCCTACAGCATTGTGCAGCCGGTGGCGGTGAGCCTGTTCTCCT TTAGCCACCTGCTGGCCTATATGGTGGTCGCTGGCGGCTTTGGTGCGTTTTTTGCACTGCATCAACTGCGACTGGCACAG CGGTTTCGCAAGATAAGCGAGGAGCTGTCCTCCAACAATGAATTCCTCGCCGGGATCTCGATGAAGATCTCGCGCTACCT GTCGCCGCAGGTCTATCGGTCGATCTTCTCCGGCGAAAAGGACGCCTCGATCTCCACCGAACGCAAAAAACTGACGGTGT TCTTTTCCGACATCAAGGATTTCACCCAGACGGCAGAGACCTTGCAGCCGGAGGAGCTGACGGCGCTTCTGAACGAGTAT TTCACCGAGATGTCCGCCATCGCGGCCAAACATGGGGCGACCATCGACAAGTTCATCGGCGATGCCATCGTGGCCTTCTT TGGTGATCCTGAAACGCTGGGCACTGCTGAGGACGCGCGGGCTTGCGTGCGGATGGCGCTGGAGATGCAGGAGCGTTTGA GAGAGCTGGAAAAAGAATGGCGCGCGCGTGGCATCGACAGGCCTTTCCGGGCGCGCATCGGTATCAACACGGGCTATTGC AACGTCGGCAACTTCGGTTCGGAAGAACGGATGGATTACACCATCATCGGCGCGGAGGCCAATCTGGCCGCCCGCCTGGA GGCGGCAGCGGAACCGGGAGGCATCGTGATGAGCCATGAGACTTATGCCCATGTGCGCGACTTCGTGGCTGCCACCCCCA TGCCGCCGATGCAGTTCAAGGGCATCACGCGCGACGTGCATCCCTATGCCATCGCGCCGGGGCAATCGGGCAACCTGCCA CCCACCGAGACCAGCATGGACGGCAAAAGCCTAACCGTGCATTTGGAGCGGCTCGACGACACCACGCGCGCGCAGCTGGA GGCGATCCTCGGCAAGCCGCTGAAAGGCTGA
Upstream 100 bases:
>100_bases GCTGCGTATAATCTGAACCATTGCGCAGGCATCCGCTTGCCAAAGCAGGAGCAAACCCGTGAACGCAGAGCTCAAGGAAA GGCACAGGGACGCGACAGAT
Downstream 100 bases:
>100_bases CCGATCCGCCCTGTCCAGACTGACCCTATCCGCAAACCCAAATGCAAAACGGCGCCCCCGCATGGGAGGCGCCGTTTCTG TTTTCCGTGATCTGAGGGCC
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1; AC 1 [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MKITRRIGRFLVNQPHLINWGIGAAIVALPVVVWMDLMAITDQSLRRQGQALDAVLDTVRSYYARNVIGRLNPDGSTFAT HDYHDRDGAIPIPATMAIELGDQIGTHGLNVQYRFASDYPFHGRETTELTWAEDHALSRFREGVDDHYLFYRGEESGLLT HAVTMITPVVMEEACVACHNNHSDSPKTDWAVGDIRGVQSYSIVQPVAVSLFSFSHLLAYMVVAGGFGAFFALHQLRLAQ RFRKISEELSSNNEFLAGISMKISRYLSPQVYRSIFSGEKDASISTERKKLTVFFSDIKDFTQTAETLQPEELTALLNEY FTEMSAIAAKHGATIDKFIGDAIVAFFGDPETLGTAEDARACVRMALEMQERLRELEKEWRARGIDRPFRARIGINTGYC NVGNFGSEERMDYTIIGAEANLAARLEAAAEPGGIVMSHETYAHVRDFVAATPMPPMQFKGITRDVHPYAIAPGQSGNLP PTETSMDGKSLTVHLERLDDTTRAQLEAILGKPLKG
Sequences:
>Translated_516_residues MKITRRIGRFLVNQPHLINWGIGAAIVALPVVVWMDLMAITDQSLRRQGQALDAVLDTVRSYYARNVIGRLNPDGSTFAT HDYHDRDGAIPIPATMAIELGDQIGTHGLNVQYRFASDYPFHGRETTELTWAEDHALSRFREGVDDHYLFYRGEESGLLT HAVTMITPVVMEEACVACHNNHSDSPKTDWAVGDIRGVQSYSIVQPVAVSLFSFSHLLAYMVVAGGFGAFFALHQLRLAQ RFRKISEELSSNNEFLAGISMKISRYLSPQVYRSIFSGEKDASISTERKKLTVFFSDIKDFTQTAETLQPEELTALLNEY FTEMSAIAAKHGATIDKFIGDAIVAFFGDPETLGTAEDARACVRMALEMQERLRELEKEWRARGIDRPFRARIGINTGYC NVGNFGSEERMDYTIIGAEANLAARLEAAAEPGGIVMSHETYAHVRDFVAATPMPPMQFKGITRDVHPYAIAPGQSGNLP PTETSMDGKSLTVHLERLDDTTRAQLEAILGKPLKG >Mature_516_residues MKITRRIGRFLVNQPHLINWGIGAAIVALPVVVWMDLMAITDQSLRRQGQALDAVLDTVRSYYARNVIGRLNPDGSTFAT HDYHDRDGAIPIPATMAIELGDQIGTHGLNVQYRFASDYPFHGRETTELTWAEDHALSRFREGVDDHYLFYRGEESGLLT HAVTMITPVVMEEACVACHNNHSDSPKTDWAVGDIRGVQSYSIVQPVAVSLFSFSHLLAYMVVAGGFGAFFALHQLRLAQ RFRKISEELSSNNEFLAGISMKISRYLSPQVYRSIFSGEKDASISTERKKLTVFFSDIKDFTQTAETLQPEELTALLNEY FTEMSAIAAKHGATIDKFIGDAIVAFFGDPETLGTAEDARACVRMALEMQERLRELEKEWRARGIDRPFRARIGINTGYC NVGNFGSEERMDYTIIGAEANLAARLEAAAEPGGIVMSHETYAHVRDFVAATPMPPMQFKGITRDVHPYAIAPGQSGNLP PTETSMDGKSLTVHLERLDDTTRAQLEAILGKPLKG
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
Organism=Homo sapiens, GI4557255, Length=189, Percent_Identity=29.1005291005291, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI24497587, Length=153, Percent_Identity=31.3725490196078, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI115387102, Length=156, Percent_Identity=28.8461538461538, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI148536830, Length=154, Percent_Identity=29.8701298701299, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193206632, Length=160, Percent_Identity=35, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17534657, Length=188, Percent_Identity=29.2553191489362, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17534655, Length=155, Percent_Identity=33.5483870967742, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193207841, Length=207, Percent_Identity=28.5024154589372, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI281365507, Length=152, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI281365509, Length=152, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 [H]
Pfam domain/function: PF00211 Guanylate_cyc [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 57300; Mature: 57300
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITRRIGRFLVNQPHLINWGIGAAIVALPVVVWMDLMAITDQSLRRQGQALDAVLDTVR CCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYYARNVIGRLNPDGSTFATHDYHDRDGAIPIPATMAIELGDQIGTHGLNVQYRFASDYP HHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHEEECCHHCCCCCCCEEEEECCCCC FHGRETTELTWAEDHALSRFREGVDDHYLFYRGEESGLLTHAVTMITPVVMEEACVACHN CCCCCCCEEEEHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC NHSDSPKTDWAVGDIRGVQSYSIVQPVAVSLFSFSHLLAYMVVAGGFGAFFALHQLRLAQ CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RFRKISEELSSNNEFLAGISMKISRYLSPQVYRSIFSGEKDASISTERKKLTVFFSDIKD HHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHH FTQTAETLQPEELTALLNEYFTEMSAIAAKHGATIDKFIGDAIVAFFGDPETLGTAEDAR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCHHHHH ACVRMALEMQERLRELEKEWRARGIDRPFRARIGINTGYCNVGNFGSEERMDYTIIGAEA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCC NLAARLEAAAEPGGIVMSHETYAHVRDFVAATPMPPMQFKGITRDVHPYAIAPGQSGNLP CHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEECCCCCCCCC PTETSMDGKSLTVHLERLDDTTRAQLEAILGKPLKG CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKITRRIGRFLVNQPHLINWGIGAAIVALPVVVWMDLMAITDQSLRRQGQALDAVLDTVR CCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYYARNVIGRLNPDGSTFATHDYHDRDGAIPIPATMAIELGDQIGTHGLNVQYRFASDYP HHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHEEECCHHCCCCCCCEEEEECCCCC FHGRETTELTWAEDHALSRFREGVDDHYLFYRGEESGLLTHAVTMITPVVMEEACVACHN CCCCCCCEEEEHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC NHSDSPKTDWAVGDIRGVQSYSIVQPVAVSLFSFSHLLAYMVVAGGFGAFFALHQLRLAQ CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RFRKISEELSSNNEFLAGISMKISRYLSPQVYRSIFSGEKDASISTERKKLTVFFSDIKD HHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHH FTQTAETLQPEELTALLNEYFTEMSAIAAKHGATIDKFIGDAIVAFFGDPETLGTAEDAR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCHHHHH ACVRMALEMQERLRELEKEWRARGIDRPFRARIGINTGYCNVGNFGSEERMDYTIIGAEA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCC NLAARLEAAAEPGGIVMSHETYAHVRDFVAATPMPPMQFKGITRDVHPYAIAPGQSGNLP CHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEECCCCCCCCC PTETSMDGKSLTVHLERLDDTTRAQLEAILGKPLKG CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]