Click here to switch to the map view.

The map label for this gene is 99081939

Identifier: 99081939

GI number: 99081939

Start: 2205061

End: 2205927

Strand: Reverse

Name: 99081939

Synonym: TM1040_2099

Alternate gene names: NA

Gene position: 2205927-2205061 (Counterclockwise)

Preceding gene: 99081940

Following gene: 99081937

Centisome position: 68.92

GC content: 65.97

Gene sequence:

>867_bases
GTGATCGCGTGGGCGCGGCATACGCTGGCCGGGCTGGCCCTGGCCTGTGTCGCGTTCACGGGTATGCCTGTTGTGGCTGC
CCCGGAAACGACGCTGCGTCCCCCTGCCGTGCGTGGTGGAGCGACACCTGAGGCTGCACGCGTTTCCGCGATGCCCACCG
CTGCGATCTTGCCTCAATCCGCACCCGCTTTGCGCCCACAGCTGCGCCCGGTATCGGCTCAGATCCTCGCCGCCGCAGCC
CGCCCGACAGAGCAAATCCCGGTTGCACCCGATGGCACCCTTCGTCCCATGATGCGCACACCCGAATTCACCCAACAGGT
GCTGTTTGGCCGCGCAAAGCGGCGCCGGGGGGCCGTTTGCGGCGACATCGATATTCAGGGCGAAGAGGCGGGCAATATTG
CCGGAACGCTGCAGGGATGCGGAGCGCGTGATGCCGTTCGCGTGCGGTCTGTCTCGGGCGTCGGTCTCAGCCGGCCTGCA
TTGATGACCTGCGAGACTGCAAAGGCTCTCAACAAATGGGTGTCGCGCGATGTGGAGACGGCCTTTGGGCGCTCCAACCG
GGTCGTGGAGCTGCGGGTTGCGGCGGGTTACAGCTGTCGCACGCGCAACAACCGTCCTGGCGCCAAGATCTCGGAACATG
GGCGTGGCCGTGCCATCGATATTTCGGGCTTCAAGCTCGAAGATGGGACCGTGGTGAGCGTGCTCAGGGGCTGGGCCGAT
GCGTCGACAAGCAGAGCGCTCCGGCGGATCTGGAAAGCGGCCTGTGGTCCGTTTCGCACGGTGCTCGGGCCGGAGGCGGA
CATCTATCACCGCGATCACTTCCACCTTGATGTGGCGCGTCATCGCAGCGGGCGCTACTGTCGCTGA

Upstream 100 bases:

>100_bases
ATCTGCATGACTATTTCACGCGCACCCGCTCGATCCGGCGCGGCATTATCGAAGCGGGTCAGGACACCGCGGCACCCGAC
TTCGGTCGCGGGGCGAAAAA

Downstream 100 bases:

>100_bases
TCCAACCGGACCTTGTTTCGACACCTGCGCATTTGTGCGGGTGCGGGCATGACAGGCTTTTCGCTCAGTTAGCGGATGAT
CAGTCGCGGCGCCGGACCGA

Product: extensin-like

Products: NA

Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Extensin Domain-Containing Protein

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MIAWARHTLAGLALACVAFTGMPVVAAPETTLRPPAVRGGATPEAARVSAMPTAAILPQSAPALRPQLRPVSAQILAAAA
RPTEQIPVAPDGTLRPMMRTPEFTQQVLFGRAKRRRGAVCGDIDIQGEEAGNIAGTLQGCGARDAVRVRSVSGVGLSRPA
LMTCETAKALNKWVSRDVETAFGRSNRVVELRVAAGYSCRTRNNRPGAKISEHGRGRAIDISGFKLEDGTVVSVLRGWAD
ASTSRALRRIWKAACGPFRTVLGPEADIYHRDHFHLDVARHRSGRYCR

Sequences:

>Translated_288_residues
MIAWARHTLAGLALACVAFTGMPVVAAPETTLRPPAVRGGATPEAARVSAMPTAAILPQSAPALRPQLRPVSAQILAAAA
RPTEQIPVAPDGTLRPMMRTPEFTQQVLFGRAKRRRGAVCGDIDIQGEEAGNIAGTLQGCGARDAVRVRSVSGVGLSRPA
LMTCETAKALNKWVSRDVETAFGRSNRVVELRVAAGYSCRTRNNRPGAKISEHGRGRAIDISGFKLEDGTVVSVLRGWAD
ASTSRALRRIWKAACGPFRTVLGPEADIYHRDHFHLDVARHRSGRYCR
>Mature_288_residues
MIAWARHTLAGLALACVAFTGMPVVAAPETTLRPPAVRGGATPEAARVSAMPTAAILPQSAPALRPQLRPVSAQILAAAA
RPTEQIPVAPDGTLRPMMRTPEFTQQVLFGRAKRRRGAVCGDIDIQGEEAGNIAGTLQGCGARDAVRVRSVSGVGLSRPA
LMTCETAKALNKWVSRDVETAFGRSNRVVELRVAAGYSCRTRNNRPGAKISEHGRGRAIDISGFKLEDGTVVSVLRGWAD
ASTSRALRRIWKAACGPFRTVLGPEADIYHRDHFHLDVARHRSGRYCR

Specific function: Unknown

COG id: COG3921

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30901; Mature: 30901

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAWARHTLAGLALACVAFTGMPVVAAPETTLRPPAVRGGATPEAARVSAMPTAAILPQS
CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHEECCCHHHHCCCC
APALRPQLRPVSAQILAAAARPTEQIPVAPDGTLRPMMRTPEFTQQVLFGRAKRRRGAVC
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEE
GDIDIQGEEAGNIAGTLQGCGARDAVRVRSVSGVGLSRPALMTCETAKALNKWVSRDVET
CCEEECCCCCCCEEEHHCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHH
AFGRSNRVVELRVAAGYSCRTRNNRPGAKISEHGRGRAIDISGFKLEDGTVVSVLRGWAD
HHCCCCCEEEEEEECCCEECCCCCCCCCCHHHCCCCCEEECCCEEECCCHHHHHHHHHCC
ASTSRALRRIWKAACGPFRTVLGPEADIYHRDHFHLDVARHRSGRYCR
CHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCEEEEHHHCCCCCCCC
>Mature Secondary Structure
MIAWARHTLAGLALACVAFTGMPVVAAPETTLRPPAVRGGATPEAARVSAMPTAAILPQS
CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHEECCCHHHHCCCC
APALRPQLRPVSAQILAAAARPTEQIPVAPDGTLRPMMRTPEFTQQVLFGRAKRRRGAVC
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEE
GDIDIQGEEAGNIAGTLQGCGARDAVRVRSVSGVGLSRPALMTCETAKALNKWVSRDVET
CCEEECCCCCCCEEEHHCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHH
AFGRSNRVVELRVAAGYSCRTRNNRPGAKISEHGRGRAIDISGFKLEDGTVVSVLRGWAD
HHCCCCCEEEEEEECCCEECCCCCCCCCCHHHCCCCCEEECCCEEECCCHHHHHHHHHCC
ASTSRALRRIWKAACGPFRTVLGPEADIYHRDHFHLDVARHRSGRYCR
CHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCEEEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA