Click here to switch to the map view.

The map label for this gene is ycgN [C]

Identifier: 99081912

GI number: 99081912

Start: 2176058

End: 2176528

Strand: Direct

Name: ycgN [C]

Synonym: TM1040_2072

Alternate gene names: 99081912

Gene position: 2176058-2176528 (Clockwise)

Preceding gene: 99081911

Following gene: 99081915

Centisome position: 67.98

GC content: 61.57

Gene sequence:

>471_bases
ATGACCAATCAGATCGACCGCAACGGGCTGACGCCGAAGTTCTGGGAGAAGAAGCCCCTGAAGACACTCTCGCAGCGCGA
GTGGGAGGCGCTCTGTGACGGGTGCGGCAAATGCTGTCTCAACAAGCTGGAGGACGAGGACAGCGGCGAGGTTGCGCTCA
CCCGTGTGGCCTGTCGCCTGCTCGACGATCAGAGCTGCCAATGCGCGCATTACGAGACCCGGCACAGCTTCATTCCCGAA
TGCATCGTGCTGAAACCTGAAAACCTGGACACCCACGCCTATTGGATGCCCCAGACCTGCGCCTATCGCCGACTTTGGGA
AGGGAAATCCCTGCCCGACTGGCACCCGCTGGTGACGGGCGATCCGGACAGCGTGCATCGCGCCGGGGTCTCGGTGCGCG
GCATGACGGTGTCGGAATTCGACACGCCGCTGGAGGAATGGGAAGACTACATTATCGAGGAACCGGTCTAA

Upstream 100 bases:

>100_bases
CGCCGAGCTGAAGTTCGACGGGCTCGAGCCTTTCATCGCGCAGATGCAGGCCGATTGCGATCAGGCCCGCGCCATCCTCA
CATCGCTCTGAGGGGGTGAC

Downstream 100 bases:

>100_bases
GGATACGCCCGGAGAGCGCTGACCGACCCCAGAGCCGATCAGCACTGGCTTATCTCTGAGACCAGAACGCCCGCAACACC
TCGGCCACCGCTTCGGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTNQIDRNGLTPKFWEKKPLKTLSQREWEALCDGCGKCCLNKLEDEDSGEVALTRVACRLLDDQSCQCAHYETRHSFIPE
CIVLKPENLDTHAYWMPQTCAYRRLWEGKSLPDWHPLVTGDPDSVHRAGVSVRGMTVSEFDTPLEEWEDYIIEEPV

Sequences:

>Translated_156_residues
MTNQIDRNGLTPKFWEKKPLKTLSQREWEALCDGCGKCCLNKLEDEDSGEVALTRVACRLLDDQSCQCAHYETRHSFIPE
CIVLKPENLDTHAYWMPQTCAYRRLWEGKSLPDWHPLVTGDPDSVHRAGVSVRGMTVSEFDTPLEEWEDYIIEEPV
>Mature_155_residues
TNQIDRNGLTPKFWEKKPLKTLSQREWEALCDGCGKCCLNKLEDEDSGEVALTRVACRLLDDQSCQCAHYETRHSFIPEC
IVLKPENLDTHAYWMPQTCAYRRLWEGKSLPDWHPLVTGDPDSVHRAGVSVRGMTVSEFDTPLEEWEDYIIEEPV

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=142, Percent_Identity=51.4084507042254, Blast_Score=151, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 18000; Mature: 17869

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQIDRNGLTPKFWEKKPLKTLSQREWEALCDGCGKCCLNKLEDEDSGEVALTRVACRL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LDDQSCQCAHYETRHSFIPECIVLKPENLDTHAYWMPQTCAYRRLWEGKSLPDWHPLVTG
HCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCC
DPDSVHRAGVSVRGMTVSEFDTPLEEWEDYIIEEPV
CCCHHHHCCCEECCCCHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TNQIDRNGLTPKFWEKKPLKTLSQREWEALCDGCGKCCLNKLEDEDSGEVALTRVACRL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LDDQSCQCAHYETRHSFIPECIVLKPENLDTHAYWMPQTCAYRRLWEGKSLPDWHPLVTG
HCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCC
DPDSVHRAGVSVRGMTVSEFDTPLEEWEDYIIEEPV
CCCHHHHCCCEECCCCHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]