| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is modC2 [H]
Identifier: 99081893
GI number: 99081893
Start: 2155876
End: 2156439
Strand: Reverse
Name: modC2 [H]
Synonym: TM1040_2053
Alternate gene names: 99081893
Gene position: 2156439-2155876 (Counterclockwise)
Preceding gene: 99081895
Following gene: 99081887
Centisome position: 67.37
GC content: 62.06
Gene sequence:
>564_bases ATGTCTGCTACCCCCATGTCGGATGACCCCACATCGCTTGCGCCCATGCAGCTGACCTATGTGATGACAACAGAACGTGG CGCCACCGACCGGCTTCTCACGGCCTTGGCCGAGCAACTGGCCAGCAAGGGGATCCGGACTGCCGGCATCGTGCAGACCA ACACGGAATGCTACGACAATAAACTCTGCGATATGGATGTGCGGGTGCTGCCAGAAGGTGAAACCATCCGCATCTCGCAG TCGCTGGGCGAGGGCGCGCGCGGCTGCCGTCTCAATCCCGACGCACTCGAACGCGCGGTCGGTCTGGTCACCAGCTCCCT CTCTCTCTCGCCTGCGCCGCAGGTACTGCTGGTCAACAAATTTGGCAAACATGAGGCCGATGGCCGCGGCATGCGCCCGA TCATTGCCGAAGCGCTGGCGATGGGGGTGCCGGTCGTCTGTGGCGTGAACAGGATGAATGTCGAGGCCTTCCAGAATTTC GCCGAAGGGCTCTGTGAAGAAGCCAGCCCGGATCTCGATGCCCTCGTAGCATGGGTCGAACGCGCGATTGCGCATCCTGC CTGA
Upstream 100 bases:
>100_bases GCCGCGCCATCCCTGCGCAGGTCGGGCTGCGACAACAGCCCTCTGGTCGGCGCAAGCCAACCGCGCTACGGTTGCCGGCA AAAGACACAAAGGATACCCC
Downstream 100 bases:
>100_bases TCCCTCCGGCCCGCTTCAGCTTTTCAAAAATATCTCGGGGTCCGGGGCAGCGCCCCGGCGCGTTCCGCCAGTGGTCACAG TTTCGATGAAATGATCCCGG
Product: 3-dehydroquinate dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSATPMSDDPTSLAPMQLTYVMTTERGATDRLLTALAEQLASKGIRTAGIVQTNTECYDNKLCDMDVRVLPEGETIRISQ SLGEGARGCRLNPDALERAVGLVTSSLSLSPAPQVLLVNKFGKHEADGRGMRPIIAEALAMGVPVVCGVNRMNVEAFQNF AEGLCEEASPDLDALVAWVERAIAHPA
Sequences:
>Translated_187_residues MSATPMSDDPTSLAPMQLTYVMTTERGATDRLLTALAEQLASKGIRTAGIVQTNTECYDNKLCDMDVRVLPEGETIRISQ SLGEGARGCRLNPDALERAVGLVTSSLSLSPAPQVLLVNKFGKHEADGRGMRPIIAEALAMGVPVVCGVNRMNVEAFQNF AEGLCEEASPDLDALVAWVERAIAHPA >Mature_186_residues SATPMSDDPTSLAPMQLTYVMTTERGATDRLLTALAEQLASKGIRTAGIVQTNTECYDNKLCDMDVRVLPEGETIRISQS LGEGARGCRLNPDALERAVGLVTSSLSLSPAPQVLLVNKFGKHEADGRGMRPIIAEALAMGVPVVCGVNRMNVEAFQNFA EGLCEEASPDLDALVAWVERAIAHPA
Specific function: Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015852 - InterPro: IPR003593 - InterPro: IPR018912 - InterPro: IPR008995 - InterPro: IPR011868 - InterPro: IPR005116 [H]
Pfam domain/function: PF00005 ABC_tran; PF10649 DUF2478; PF03459 TOBE [H]
EC number: =3.6.3.29 [H]
Molecular weight: Translated: 19940; Mature: 19809
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPMSDDPTSLAPMQLTYVMTTERGATDRLLTALAEQLASKGIRTAGIVQTNTECYDN CCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCC KLCDMDVRVLPEGETIRISQSLGEGARGCRLNPDALERAVGLVTSSLSLSPAPQVLLVNK CCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEC FGKHEADGRGMRPIIAEALAMGVPVVCGVNRMNVEAFQNFAEGLCEEASPDLDALVAWVE CCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH RAIAHPA HHHCCCC >Mature Secondary Structure SATPMSDDPTSLAPMQLTYVMTTERGATDRLLTALAEQLASKGIRTAGIVQTNTECYDN CCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCC KLCDMDVRVLPEGETIRISQSLGEGARGCRLNPDALERAVGLVTSSLSLSPAPQVLLVNK CCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEC FGKHEADGRGMRPIIAEALAMGVPVVCGVNRMNVEAFQNFAEGLCEEASPDLDALVAWVE CCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH RAIAHPA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]