The gene/protein map for NC_007925 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081891

Identifier: 99081891

GI number: 99081891

Start: 2154527

End: 2155009

Strand: Direct

Name: 99081891

Synonym: TM1040_2051

Alternate gene names: NA

Gene position: 2154527-2155009 (Clockwise)

Preceding gene: 99081890

Following gene: 99081892

Centisome position: 67.31

GC content: 64.6

Gene sequence:

>483_bases
GTGCCGACACACCCTCTGACACTTGCCCTGCGCTCTGCGAGTCTGGCCGTCGGGCTGGCGCTGATGGTGGCACTTGTGCC
CGTGTCCAAGGCTGCGGCGGGACCGATTTATATTGCGGTTCAGGATGGCTATGCGATGGGGGGCTATGATCCGGTGTCCT
TCCACGAGGCGGAGGCCCCTTTGCGCGGTCACCAAGATCATGCCTTGATGTGGAAAGGGGCGGTGTGGCTGTTCCACTCC
GCGCAGAACCGGTCCCGGTTCGAAGCCGATCCGCGGGCCTTTGCGCCAAGGTTCGGCGGGCATTGCGCCTATGGGCTCTC
ACGCGGGCACGCCTCGGTCGGCGATCCGGAGACCTGGGAGATCGTGGATGGGCAGCTGTTTCTTTTCAATTCTGCGCGCG
GGCGCAGCCTGTGGCAAGAAGACAGGCAACAGATGCTCAAAGCTGCGCAGGCGTCCTGGCCGGAGGCGCTGCGCGCCCAA
TGA

Upstream 100 bases:

>100_bases
TTCAAATTCTCGTATGTTCTCTTTTCTCGGGGCGCGGCCTTGGGCATTGTTGGCGCATCTCATCGCGCAGAAACCTGACC
CCGGACGGAGACCCTTGGAC

Downstream 100 bases:

>100_bases
GCGCTGAGGCCTGACCCGCGCAAGCAATGCGGCGCGTATCGTGACCCCTACAACCTGGCCGCGAGGTTGAGGCCGATTCG
TCAAGGCGCAACCCGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: YHS Domain-Containing Protein; YHS Domain Family; Tat Pathway Signal Sequence Domain Protein

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPTHPLTLALRSASLAVGLALMVALVPVSKAAAGPIYIAVQDGYAMGGYDPVSFHEAEAPLRGHQDHALMWKGAVWLFHS
AQNRSRFEADPRAFAPRFGGHCAYGLSRGHASVGDPETWEIVDGQLFLFNSARGRSLWQEDRQQMLKAAQASWPEALRAQ

Sequences:

>Translated_160_residues
MPTHPLTLALRSASLAVGLALMVALVPVSKAAAGPIYIAVQDGYAMGGYDPVSFHEAEAPLRGHQDHALMWKGAVWLFHS
AQNRSRFEADPRAFAPRFGGHCAYGLSRGHASVGDPETWEIVDGQLFLFNSARGRSLWQEDRQQMLKAAQASWPEALRAQ
>Mature_159_residues
PTHPLTLALRSASLAVGLALMVALVPVSKAAAGPIYIAVQDGYAMGGYDPVSFHEAEAPLRGHQDHALMWKGAVWLFHSA
QNRSRFEADPRAFAPRFGGHCAYGLSRGHASVGDPETWEIVDGQLFLFNSARGRSLWQEDRQQMLKAAQASWPEALRAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17466; Mature: 17335

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTHPLTLALRSASLAVGLALMVALVPVSKAAAGPIYIAVQDGYAMGGYDPVSFHEAEAP
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCCCCCCCC
LRGHQDHALMWKGAVWLFHSAQNRSRFEADPRAFAPRFGGHCAYGLSRGHASVGDPETWE
CCCCCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEE
IVDGQLFLFNSARGRSLWQEDRQQMLKAAQASWPEALRAQ
EECCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
PTHPLTLALRSASLAVGLALMVALVPVSKAAAGPIYIAVQDGYAMGGYDPVSFHEAEAP
CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCCCCCCCC
LRGHQDHALMWKGAVWLFHSAQNRSRFEADPRAFAPRFGGHCAYGLSRGHASVGDPETWE
CCCCCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEE
IVDGQLFLFNSARGRSLWQEDRQQMLKAAQASWPEALRAQ
EECCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA