| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081890
Identifier: 99081890
GI number: 99081890
Start: 2154013
End: 2154354
Strand: Direct
Name: 99081890
Synonym: TM1040_2050
Alternate gene names: NA
Gene position: 2154013-2154354 (Clockwise)
Preceding gene: 99081889
Following gene: 99081891
Centisome position: 67.29
GC content: 57.02
Gene sequence:
>342_bases GTGCAATCCGCCTTTGTGCCGGACGCCACACTTCATGCGCTGGTGTGCGGCACCTGCGGCGCCCCCCTCAAGGCGCAAAA GCAACGCCCGCTGAGCGATCACAAGGGCGCAAAGCTGCCCAACGCCTCGACCCTTCAGCCCCATGGCAGAGATGACAAAG CGGCAAAGGTCAAAAAACCCAAGCCCGTCAAAACGGGCAAACCGGGAAAGTCGGGAAAATCGGGCGACTGGAGCACGCTT GCGCATGAACTGGCATCAGCCAAGCTGATGAAGAAGCGTAAGAAGAAAAAGAAATCCTCGTGGAAGATGGTCTTTGACGT GATCGAGGACATCTTTGACTGA
Upstream 100 bases:
>100_bases CTCCCTATATGCATCTTTGAAGGGTTAGGACGCAGAGGAGGCTCCCATCGCACATCACAGTATTCCCGGAGGCAAGCTGA TTGTCTGTTGTTATTGTGGC
Downstream 100 bases:
>100_bases GACTGCTGGCGGGATGCGCCGATTTACTGTGTCTTCACGGTAGCAGTCGCTTCTGTCGCTGCTCACAACATGTTCAAATT CTCGTATGTTCTCTTTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MQSAFVPDATLHALVCGTCGAPLKAQKQRPLSDHKGAKLPNASTLQPHGRDDKAAKVKKPKPVKTGKPGKSGKSGDWSTL AHELASAKLMKKRKKKKKSSWKMVFDVIEDIFD
Sequences:
>Translated_113_residues MQSAFVPDATLHALVCGTCGAPLKAQKQRPLSDHKGAKLPNASTLQPHGRDDKAAKVKKPKPVKTGKPGKSGKSGDWSTL AHELASAKLMKKRKKKKKSSWKMVFDVIEDIFD >Mature_113_residues MQSAFVPDATLHALVCGTCGAPLKAQKQRPLSDHKGAKLPNASTLQPHGRDDKAAKVKKPKPVKTGKPGKSGKSGDWSTL AHELASAKLMKKRKKKKKSSWKMVFDVIEDIFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12289; Mature: 12289
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSAFVPDATLHALVCGTCGAPLKAQKQRPLSDHKGAKLPNASTLQPHGRDDKAAKVKKP CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPVKTGKPGKSGKSGDWSTLAHELASAKLMKKRKKKKKSSWKMVFDVIEDIFD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MQSAFVPDATLHALVCGTCGAPLKAQKQRPLSDHKGAKLPNASTLQPHGRDDKAAKVKKP CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPVKTGKPGKSGKSGDWSTLAHELASAKLMKKRKKKKKSSWKMVFDVIEDIFD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA